==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 21-APR-06 2GQI . COMPND 2 MOLECULE: RAS GTPASE-ACTIVATING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5365.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 45.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 19.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.2 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 107.1 -20.4 12.1 5.9 2 2 A S - 0 0 123 1,-0.1 2,-0.3 0, 0.0 0, 0.0 -0.510 360.0 -70.9-102.6 172.9 -18.1 14.4 8.0 3 3 A S S S+ 0 0 132 -2,-0.2 2,-0.2 1,-0.1 -1,-0.1 -0.458 78.4 115.4 -66.3 125.7 -15.2 16.6 7.0 4 4 A G - 0 0 77 -2,-0.3 2,-0.2 -3,-0.0 -1,-0.1 -0.606 60.5 -41.4-156.8-142.2 -12.2 14.6 5.9 5 5 A S - 0 0 96 -2,-0.2 -1,-0.0 31,-0.1 0, 0.0 -0.673 32.6-138.9-105.4 161.0 -10.0 13.8 2.9 6 6 A S S S- 0 0 130 -2,-0.2 -1,-0.1 1,-0.1 2,-0.0 0.941 71.2 -56.3 -81.6 -54.1 -10.9 13.1 -0.7 7 7 A G - 0 0 33 2,-0.0 2,-0.1 30,-0.0 29,-0.1 -0.186 47.3-145.3 165.2 95.4 -8.6 10.2 -1.5 8 8 A R - 0 0 107 27,-0.3 27,-2.2 26,-0.1 2,-0.4 -0.456 17.5-142.2 -72.7 141.9 -4.8 10.1 -1.2 9 9 A R + 0 0 145 56,-0.2 56,-2.2 25,-0.2 2,-0.3 -0.903 24.7 169.8-110.2 132.9 -2.9 8.0 -3.8 10 10 A V E -A 64 0A 6 23,-0.5 23,-1.3 -2,-0.4 2,-0.3 -0.860 18.9-144.2-134.6 169.1 0.1 5.9 -2.9 11 11 A R E -AB 63 32A 111 52,-1.4 52,-1.7 -2,-0.3 2,-1.0 -0.986 24.6-112.8-138.1 147.1 2.3 3.2 -4.5 12 12 A A E -A 62 0A 0 19,-1.9 18,-2.4 -2,-0.3 19,-0.2 -0.681 24.6-174.1 -82.1 103.0 4.2 0.1 -3.2 13 13 A I S S+ 0 0 75 -2,-1.0 -1,-0.2 48,-0.6 49,-0.1 0.704 75.4 21.9 -68.4 -19.3 7.9 0.9 -3.5 14 14 A L S S- 0 0 81 47,-0.7 -1,-0.1 14,-0.1 2,-0.1 -0.995 90.6 -96.6-149.0 151.8 8.5 -2.7 -2.5 15 15 A P - 0 0 75 0, 0.0 2,-0.3 0, 0.0 13,-0.2 -0.420 39.0-158.4 -69.8 139.6 6.7 -6.1 -2.5 16 16 A Y - 0 0 68 11,-1.2 2,-0.6 -2,-0.1 11,-0.2 -0.769 16.2-132.5-117.7 163.6 5.0 -7.1 0.7 17 17 A T - 0 0 119 -2,-0.3 9,-0.1 9,-0.1 7,-0.1 -0.784 27.4-137.1-119.4 87.2 3.9 -10.5 2.2 18 18 A K - 0 0 82 -2,-0.6 8,-0.1 1,-0.1 39,-0.0 0.096 31.6 -96.5 -36.6 151.6 0.3 -10.2 3.5 19 19 A V > - 0 0 56 1,-0.1 3,-0.5 6,-0.1 2,-0.2 -0.564 38.6-109.3 -80.2 138.9 -0.3 -11.9 6.8 20 20 A P T 3 S+ 0 0 93 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.480 99.1 15.3 -69.8 129.9 -1.7 -15.5 6.8 21 21 A D T 3 S+ 0 0 156 1,-0.3 2,-0.3 -2,-0.2 -2,-0.0 0.948 110.0 93.2 72.8 51.2 -5.3 -15.8 8.0 22 22 A T S < S- 0 0 65 -3,-0.5 -1,-0.3 2,-0.2 -4,-0.0 -0.942 87.6-100.2-158.6 176.5 -6.1 -12.1 7.8 23 23 A D S S+ 0 0 113 -2,-0.3 -5,-0.1 -3,-0.1 -1,-0.0 0.728 79.2 121.4 -78.0 -23.1 -7.6 -9.4 5.6 24 24 A E - 0 0 18 31,-0.2 2,-0.4 1,-0.1 -2,-0.2 0.090 54.1-142.5 -37.8 152.6 -4.1 -8.2 4.6 25 25 A I - 0 0 18 31,-0.3 2,-0.5 28,-0.1 -1,-0.1 -0.966 7.0-124.7-128.6 144.0 -3.4 -8.3 0.9 26 26 A S + 0 0 61 -2,-0.4 2,-0.2 -9,-0.1 -9,-0.1 -0.750 35.3 175.0 -90.0 125.7 -0.3 -9.2 -1.1 27 27 A F - 0 0 4 -2,-0.5 -11,-1.2 -11,-0.2 2,-0.3 -0.759 20.5-131.0-124.0 170.7 1.0 -6.5 -3.5 28 28 A L > - 0 0 93 -2,-0.2 3,-2.4 -13,-0.2 -16,-0.3 -0.878 39.5 -80.8-123.5 156.0 4.0 -6.0 -5.8 29 29 A K T 3 S+ 0 0 137 -2,-0.3 -16,-0.2 1,-0.3 3,-0.1 -0.324 118.9 24.6 -55.7 121.1 6.4 -3.2 -6.4 30 30 A G T 3 S+ 0 0 41 -18,-2.4 -1,-0.3 1,-0.4 2,-0.2 0.044 86.1 130.4 111.3 -25.2 4.7 -0.7 -8.7 31 31 A D < - 0 0 23 -3,-2.4 -19,-1.9 -19,-0.2 -1,-0.4 -0.458 48.3-143.9 -66.4 126.6 1.1 -1.6 -7.8 32 32 A M B -B 11 0A 70 -2,-0.2 17,-1.4 -21,-0.2 18,-0.4 -0.222 17.3-169.5 -83.5 177.3 -0.9 1.5 -7.0 33 33 A F - 0 0 0 -23,-1.3 -23,-0.5 15,-0.2 2,-0.4 -0.915 21.4-119.4-155.6 179.2 -3.7 1.8 -4.4 34 34 A I - 0 0 57 -2,-0.3 2,-0.6 13,-0.2 -25,-0.2 -0.904 20.2-140.5-137.1 107.3 -6.5 4.0 -3.1 35 35 A V + 0 0 9 -27,-2.2 -27,-0.3 -2,-0.4 11,-0.2 -0.524 34.7 157.0 -68.8 113.7 -6.5 5.3 0.5 36 36 A H + 0 0 106 9,-1.4 2,-0.4 -2,-0.6 -1,-0.2 0.807 64.7 21.9-103.6 -47.1 -10.1 5.2 1.7 37 37 A N E -C 45 0B 94 8,-1.0 8,-2.0 -30,-0.0 2,-0.9 -0.980 67.2-139.2-128.6 138.9 -9.7 5.1 5.5 38 38 A E E -C 44 0B 107 -2,-0.4 6,-0.2 6,-0.2 4,-0.0 -0.819 27.7-172.2 -99.7 101.1 -6.8 6.2 7.7 39 39 A L - 0 0 59 4,-1.0 4,-0.4 -2,-0.9 3,-0.3 -0.079 19.9-107.8 -79.4-175.8 -6.2 3.6 10.4 40 40 A E S S+ 0 0 144 2,-0.2 -1,-0.1 1,-0.2 0, 0.0 -0.410 90.4 47.7-106.1-176.1 -3.9 3.9 13.4 41 41 A D S S- 0 0 161 1,-0.2 -1,-0.2 -2,-0.1 -2,-0.0 0.770 136.9 -54.5 54.1 25.8 -0.6 2.2 14.4 42 42 A G S S+ 0 0 26 -3,-0.3 2,-0.3 1,-0.2 18,-0.2 0.991 107.0 121.2 72.7 64.7 0.5 3.0 10.8 43 43 A W - 0 0 80 -4,-0.4 -4,-1.0 15,-0.2 2,-0.3 -0.989 35.1-173.1-154.0 156.9 -2.2 1.5 8.7 44 44 A M E -CD 38 57B 13 13,-1.3 13,-1.7 -2,-0.3 2,-1.4 -0.981 30.9-119.8-155.7 141.5 -4.9 2.4 6.1 45 45 A W E +CD 37 56B 70 -8,-2.0 -9,-1.4 -2,-0.3 -8,-1.0 -0.652 52.5 157.0 -85.1 89.0 -7.7 0.7 4.4 46 46 A V E - D 0 55B 0 -2,-1.4 9,-2.1 9,-0.8 2,-0.4 -0.369 36.0-129.4-102.7-176.1 -6.7 0.9 0.7 47 47 A T E - D 0 54B 17 7,-0.2 7,-0.3 -13,-0.2 -13,-0.2 -0.920 18.4-127.0-143.5 113.9 -7.6 -1.1 -2.4 48 48 A N > - 0 0 0 5,-1.8 4,-1.1 -2,-0.4 5,-0.4 -0.317 9.3-151.8 -59.1 134.3 -5.1 -2.6 -4.8 49 49 A L T 4 S+ 0 0 78 -17,-1.4 -1,-0.1 2,-0.2 -16,-0.1 0.750 95.0 49.9 -79.0 -25.2 -5.8 -1.5 -8.4 50 50 A R T 4 S+ 0 0 129 -18,-0.4 -1,-0.1 1,-0.1 -17,-0.1 0.948 124.9 25.2 -77.4 -53.1 -4.2 -4.7 -9.8 51 51 A T T 4 S- 0 0 49 2,-0.1 -2,-0.2 -25,-0.1 -1,-0.1 0.659 96.0-140.3 -85.0 -18.0 -6.0 -7.2 -7.6 52 52 A D < + 0 0 112 -4,-1.1 2,-0.3 1,-0.2 -3,-0.2 0.888 58.1 127.5 59.0 40.8 -9.0 -4.8 -7.1 53 53 A E - 0 0 121 -5,-0.4 -5,-1.8 0, 0.0 2,-0.3 -0.906 57.0-123.1-128.0 156.1 -9.3 -5.9 -3.5 54 54 A Q E +D 47 0B 101 -2,-0.3 2,-0.2 -7,-0.3 -7,-0.2 -0.744 43.7 132.7 -99.7 146.0 -9.4 -4.0 -0.2 55 55 A G E -D 46 0B 0 -9,-2.1 -9,-0.8 -2,-0.3 2,-0.5 -0.876 53.1 -76.3-164.2-164.4 -7.0 -4.6 2.7 56 56 A L E +D 45 0B 47 -2,-0.2 -31,-0.3 -11,-0.2 2,-0.3 -0.953 44.4 173.2-121.0 115.4 -4.7 -3.1 5.3 57 57 A I E -D 44 0B 1 -13,-1.7 -13,-1.3 -2,-0.5 2,-0.3 -0.809 29.7-114.1-118.3 159.8 -1.3 -1.7 4.3 58 58 A V > - 0 0 31 -2,-0.3 3,-1.4 -15,-0.2 -15,-0.2 -0.713 12.7-136.1 -94.6 143.1 1.5 0.2 6.1 59 59 A E T 3 S+ 0 0 131 -2,-0.3 3,-0.2 1,-0.3 -1,-0.1 0.432 103.6 67.3 -74.7 2.4 2.4 3.8 5.2 60 60 A D T 3 S+ 0 0 127 -18,-0.2 -1,-0.3 1,-0.2 -17,-0.0 0.601 98.2 48.7 -95.6 -15.7 6.0 2.6 5.6 61 61 A L S < S+ 0 0 35 -3,-1.4 -47,-0.7 -48,-0.0 -48,-0.6 0.187 110.8 58.9-107.5 13.9 5.9 0.3 2.6 62 62 A V E -A 12 0A 18 -50,-0.2 2,-0.3 -3,-0.2 -50,-0.2 -0.881 67.4-140.3-137.2 168.5 4.3 3.0 0.3 63 63 A E E -A 11 0A 64 -52,-1.7 -52,-1.4 -2,-0.3 2,-0.4 -0.933 27.0-102.8-131.9 155.2 5.1 6.4 -1.0 64 64 A E E -A 10 0A 144 -2,-0.3 2,-1.2 -54,-0.2 -54,-0.2 -0.620 25.7-144.0 -79.7 129.5 3.0 9.6 -1.7 65 65 A V + 0 0 48 -56,-2.2 2,-0.3 -2,-0.4 -56,-0.2 -0.707 53.6 117.5 -96.0 85.7 2.1 10.2 -5.3 66 66 A S + 0 0 112 -2,-1.2 3,-0.1 0, 0.0 -2,-0.1 -0.984 25.7 106.4-152.2 137.9 2.3 13.9 -5.7 67 67 A G - 0 0 54 -2,-0.3 4,-0.1 1,-0.1 -2,-0.0 -0.892 66.4 -97.5 166.1 164.3 4.4 16.3 -7.8 68 68 A P S S+ 0 0 143 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.866 91.9 93.7 -69.7 -38.1 4.7 18.8 -10.7 69 69 A S S S- 0 0 103 1,-0.1 2,-0.1 -3,-0.1 -2,-0.1 -0.296 85.9-110.5 -59.1 137.7 6.2 16.2 -13.0 70 70 A S 0 0 120 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.396 360.0 360.0 -71.0 146.1 3.7 14.3 -15.1 71 71 A G 0 0 113 -2,-0.1 0, 0.0 -4,-0.1 0, 0.0 0.057 360.0 360.0 90.4 360.0 3.1 10.6 -14.4