==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDORIBONUCLEASE 28-NOV-97 1GSP . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR I.ZEGERS,L.WYNS . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5732.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 58.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 151 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 149.3 5.9 55.5 5.8 2 2 A a - 0 0 47 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.632 360.0-159.4 -86.6 141.4 7.7 52.5 7.3 3 3 A D S S+ 0 0 84 8,-2.3 2,-0.4 1,-0.4 9,-0.2 0.798 93.0 21.2 -82.6 -30.6 6.4 48.9 6.8 4 4 A Y E S-A 11 0A 62 7,-1.9 7,-2.9 -3,-0.1 2,-0.6 -0.992 70.4-165.9-140.3 126.3 8.3 48.0 9.9 5 5 A T E -A 10 0A 49 99,-3.2 99,-1.6 -2,-0.4 2,-0.8 -0.951 4.2-176.5-118.1 109.8 9.5 50.3 12.6 6 6 A b E > -A 9 0A 0 3,-2.1 3,-2.2 -2,-0.6 2,-0.6 -0.827 67.3 -63.1-105.7 91.9 12.1 48.9 15.0 7 7 A G T 3 S- 0 0 43 -2,-0.8 97,-0.1 1,-0.3 84,-0.0 -0.597 121.5 -15.8 68.6-113.9 12.6 51.7 17.6 8 8 A S T 3 S+ 0 0 123 -2,-0.6 -1,-0.3 -3,-0.1 2,-0.2 0.571 116.3 103.6 -96.6 -14.2 14.0 54.5 15.4 9 9 A N E < -A 6 0A 49 -3,-2.2 -3,-2.1 1,-0.0 2,-0.5 -0.525 56.8-154.9 -76.8 136.3 14.9 52.3 12.4 10 10 A a E -A 5 0A 73 -2,-0.2 2,-0.3 -5,-0.2 -5,-0.2 -0.944 13.6-178.4-115.4 122.3 12.6 52.3 9.4 11 11 A Y E -A 4 0A 5 -7,-2.9 -8,-2.3 -2,-0.5 -7,-1.9 -0.907 13.4-152.5-122.9 148.8 12.3 49.4 7.0 12 12 A S > - 0 0 40 -2,-0.3 4,-1.7 -9,-0.2 5,-0.1 -0.549 39.5-101.3-104.6 173.3 10.3 48.8 3.8 13 13 A S H > S+ 0 0 60 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.841 124.6 56.7 -64.1 -31.3 9.2 45.4 2.5 14 14 A S H > S+ 0 0 81 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.864 103.3 52.3 -66.5 -40.0 12.1 45.5 0.1 15 15 A D H > S+ 0 0 63 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.920 113.6 44.5 -60.6 -45.2 14.6 45.9 2.9 16 16 A V H X S+ 0 0 3 -4,-1.7 4,-2.9 2,-0.2 -2,-0.2 0.905 112.7 49.7 -67.5 -44.5 13.1 42.9 4.6 17 17 A S H X S+ 0 0 72 -4,-2.6 4,-2.4 1,-0.2 -2,-0.2 0.895 111.3 50.0 -62.6 -42.5 12.9 40.7 1.4 18 18 A T H X S+ 0 0 81 -4,-2.3 4,-1.4 2,-0.2 -1,-0.2 0.931 114.0 44.3 -62.9 -45.6 16.6 41.6 0.6 19 19 A A H X S+ 0 0 8 -4,-2.0 4,-2.2 -5,-0.2 -2,-0.2 0.935 113.5 50.7 -64.8 -46.6 17.8 40.6 4.1 20 20 A Q H X S+ 0 0 18 -4,-2.9 4,-3.0 1,-0.2 5,-0.3 0.915 106.5 53.6 -58.5 -47.6 15.7 37.5 4.3 21 21 A A H X S+ 0 0 58 -4,-2.4 4,-2.1 1,-0.2 -1,-0.2 0.883 110.1 48.8 -56.1 -41.0 16.9 36.1 0.9 22 22 A A H X S+ 0 0 25 -4,-1.4 4,-2.1 2,-0.2 -1,-0.2 0.953 114.6 43.7 -64.1 -51.5 20.5 36.5 2.0 23 23 A G H X S+ 0 0 0 -4,-2.2 4,-1.9 1,-0.2 -2,-0.2 0.844 114.0 49.9 -63.6 -38.8 19.9 34.7 5.4 24 24 A Y H X S+ 0 0 36 -4,-3.0 4,-2.9 2,-0.2 -1,-0.2 0.891 108.0 54.8 -67.5 -39.7 17.9 32.0 3.8 25 25 A K H X S+ 0 0 117 -4,-2.1 4,-1.9 -5,-0.3 -2,-0.2 0.945 110.0 45.8 -57.4 -49.2 20.5 31.4 1.2 26 26 A L H X>S+ 0 0 29 -4,-2.1 5,-2.4 1,-0.2 4,-0.7 0.885 111.3 53.1 -61.8 -39.6 23.2 30.9 3.9 27 27 A H H ><5S+ 0 0 41 -4,-1.9 3,-1.1 1,-0.2 -2,-0.2 0.943 108.3 50.3 -61.5 -46.9 20.8 28.6 5.8 28 28 A E H 3<5S+ 0 0 122 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.842 112.2 46.7 -59.2 -38.9 20.3 26.5 2.7 29 29 A D H 3<5S- 0 0 78 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.510 111.2-120.5 -83.4 -4.9 24.1 26.2 2.1 30 30 A G T <<5 + 0 0 67 -3,-1.1 2,-0.3 -4,-0.7 -3,-0.2 0.877 69.3 128.5 68.6 38.3 24.7 25.3 5.7 31 31 A E < - 0 0 115 -5,-2.4 2,-0.3 -6,-0.1 -1,-0.3 -0.848 39.4-159.7-124.4 158.7 27.0 28.3 6.2 32 32 A T - 0 0 78 -2,-0.3 2,-0.3 -3,-0.1 5,-0.0 -0.903 3.4-154.3-135.2 162.0 27.2 31.1 8.8 33 33 A V B > +B 38 0B 39 5,-2.4 5,-2.5 -2,-0.3 37,-0.2 -0.971 54.3 29.1-135.2 151.9 28.7 34.6 9.2 34 34 A G T > 5S- 0 0 30 -2,-0.3 3,-1.2 35,-0.3 38,-0.1 0.043 91.2 -78.8 86.4 163.0 29.7 36.7 12.2 35 35 A S T 3 5S+ 0 0 123 1,-0.2 -1,-0.2 36,-0.2 37,-0.0 0.687 130.4 53.1 -73.1 -18.9 31.0 35.6 15.6 36 36 A N T 3 5S- 0 0 105 -3,-0.2 -1,-0.2 4,-0.0 -2,-0.1 0.173 113.4-118.1-101.5 15.8 27.4 34.8 16.7 37 37 A S T < 5 - 0 0 55 -3,-1.2 -3,-0.2 1,-0.2 -2,-0.1 0.932 36.8-132.9 48.0 75.5 26.8 32.5 13.7 38 38 A Y B + 0 0 31 1,-0.1 3,-1.0 2,-0.1 -2,-0.0 0.905 43.6 162.1 66.1 45.4 10.7 32.1 20.3 45 45 A Y T 3 S+ 0 0 198 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.787 74.0 63.9 -61.6 -29.2 11.1 32.1 24.1 46 46 A E T 3 S- 0 0 58 1,-0.0 -1,-0.3 55,-0.0 -2,-0.1 0.797 106.2-133.7 -64.3 -31.7 9.1 35.4 23.8 47 47 A G < - 0 0 54 -3,-1.0 -2,-0.1 1,-0.1 2,-0.1 0.896 31.2-176.3 78.7 41.6 6.2 33.5 22.5 48 48 A F - 0 0 33 1,-0.1 2,-1.4 53,-0.0 -1,-0.1 -0.414 32.6-119.3 -68.1 148.1 5.3 35.7 19.6 49 49 A D - 0 0 159 -2,-0.1 2,-0.1 2,-0.0 -1,-0.1 -0.595 40.9-175.3 -91.5 73.5 2.1 34.5 17.7 50 50 A F - 0 0 19 -2,-1.4 38,-0.1 1,-0.1 37,-0.1 -0.419 26.7-140.7 -70.8 143.9 3.7 33.9 14.3 51 51 A S S S+ 0 0 126 36,-0.4 2,-0.3 35,-0.1 -1,-0.1 0.470 81.1 65.0 -82.4 -7.7 1.4 33.0 11.4 52 52 A V S S- 0 0 25 35,-0.1 -2,-0.1 33,-0.1 2,-0.0 -0.830 88.5 -97.0-117.6 158.9 3.9 30.4 10.0 53 53 A S - 0 0 90 -2,-0.3 29,-0.2 1,-0.1 30,-0.2 -0.291 48.0 -86.0 -75.3 155.7 5.3 27.2 11.3 54 54 A S S S+ 0 0 83 27,-0.1 2,-0.2 2,-0.1 -1,-0.1 -0.366 81.0 89.3 -83.6 170.0 8.6 26.6 13.0 55 55 A P - 0 0 47 0, 0.0 27,-0.7 0, 0.0 2,-0.3 0.496 65.1-166.4 -68.7 154.0 11.6 26.1 13.0 56 56 A Y E -CD 42 81C 26 -14,-0.6 -14,-2.3 25,-0.2 2,-0.4 -0.848 8.3-161.0-112.2 151.6 12.4 29.8 12.9 57 57 A Y E -CD 41 80C 38 23,-2.8 23,-2.2 -2,-0.3 2,-0.4 -0.987 9.4-141.3-133.9 139.1 15.8 31.3 12.0 58 58 A E E +CD 40 79C 17 -18,-2.7 -18,-1.3 -2,-0.4 21,-0.2 -0.830 19.1 175.5-105.0 143.1 17.0 34.8 12.8 59 59 A W E - D 0 78C 1 19,-1.8 19,-3.4 -2,-0.4 2,-0.1 -0.988 33.9-109.0-142.8 132.9 19.1 37.0 10.5 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.5 -0.345 23.2-159.1 -65.6 140.5 20.2 40.6 11.2 61 61 A I B -G 67 0D 7 15,-1.3 2,-0.4 12,-0.3 15,-0.4 -0.990 16.1-143.9-120.0 127.3 18.7 43.4 9.2 62 62 A L > - 0 0 37 4,-0.6 3,-1.4 -2,-0.5 12,-0.1 -0.803 16.2-143.1-100.5 139.0 20.7 46.6 9.1 63 63 A S T 3 S+ 0 0 84 -2,-0.4 -1,-0.1 1,-0.3 -53,-0.1 0.724 99.5 70.6 -66.2 -19.7 19.5 50.2 9.1 64 64 A S T 3 S- 0 0 79 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.738 109.7-120.0 -69.3 -23.7 22.4 51.0 6.8 65 65 A G S < S+ 0 0 53 -3,-1.4 2,-0.2 1,-0.4 -2,-0.1 0.363 73.8 121.8 98.5 -5.4 20.7 49.1 4.0 66 66 A D - 0 0 118 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.4 -0.516 69.5-107.2 -87.1 160.6 23.6 46.7 3.5 67 67 A V B -G 61 0D 64 -2,-0.2 -6,-0.1 -6,-0.1 -1,-0.1 -0.716 45.8 -98.8 -87.0 135.0 23.3 42.9 3.9 68 68 A Y + 0 0 9 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.308 50.4 162.3 -55.5 130.1 24.8 41.6 7.1 69 69 A S - 0 0 105 1,-0.6 -35,-0.3 -36,-0.0 2,-0.2 0.220 60.7 -58.2-135.1 11.7 28.3 40.2 6.4 70 70 A G S S+ 0 0 30 -37,-0.2 -1,-0.6 1,-0.1 2,-0.1 -0.601 90.9 68.6 130.4 169.3 29.8 40.1 9.9 71 71 A G S S+ 0 0 58 -2,-0.2 -36,-0.2 -3,-0.1 -1,-0.1 -0.455 97.2 5.3 84.1-160.0 30.6 42.4 12.8 72 72 A S - 0 0 106 1,-0.1 -2,-0.1 -2,-0.1 -38,-0.0 -0.377 58.8-159.7 -62.9 125.0 28.0 44.1 15.0 73 73 A P - 0 0 17 0, 0.0 3,-0.3 0, 0.0 -12,-0.3 0.506 29.0-141.1 -83.2 -6.4 24.5 42.8 14.0 74 74 A G - 0 0 42 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.256 36.2 -67.0 73.9-165.0 22.7 45.8 15.5 75 75 A A S S+ 0 0 27 -69,-0.1 17,-1.5 -14,-0.1 2,-0.3 0.623 103.8 87.6 -99.2 -13.9 19.4 45.3 17.4 76 76 A D E + E 0 91C 2 -15,-0.4 -15,-1.3 -3,-0.3 2,-0.3 -0.630 48.0 176.3 -96.0 147.0 17.1 44.3 14.5 77 77 A R E -DE 60 90C 9 13,-2.6 13,-2.1 -17,-0.3 2,-0.4 -0.991 24.1-140.6-145.0 147.7 16.4 40.8 13.1 78 78 A V E -DE 59 89C 0 -19,-3.4 -19,-1.8 -2,-0.3 2,-0.5 -0.907 21.9-150.3-105.9 133.7 14.2 39.2 10.4 79 79 A V E +DE 58 88C 0 9,-2.9 8,-3.1 -2,-0.4 9,-1.6 -0.950 23.2 166.7-110.3 122.1 12.8 35.9 11.4 80 80 A F E -DE 57 86C 0 -23,-2.2 -23,-2.8 -2,-0.5 6,-0.2 -0.854 21.2-134.9-128.1 164.5 12.0 33.3 8.7 81 81 A N E > -D 56 0C 4 4,-1.5 3,-1.7 -2,-0.3 -25,-0.2 -0.403 40.8 -78.6-110.3-168.5 11.2 29.6 8.6 82 82 A E T 3 S+ 0 0 73 -27,-0.7 -26,-0.1 1,-0.3 -28,-0.1 0.772 127.9 50.9 -60.7 -29.9 12.2 26.5 6.6 83 83 A N T 3 S- 0 0 118 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.227 118.8-107.9 -93.6 12.9 10.0 27.4 3.7 84 84 A N < + 0 0 60 -3,-1.7 2,-0.5 1,-0.3 -2,-0.1 0.898 69.4 151.2 60.9 39.4 11.5 31.0 3.5 85 85 A Q - 0 0 87 -32,-0.1 -4,-1.5 0, 0.0 2,-0.4 -0.901 51.5-116.6-101.5 130.8 8.2 32.4 4.8 86 86 A L E -E 80 0C 56 -2,-0.5 -6,-0.2 -6,-0.2 -35,-0.1 -0.544 30.8-180.0 -68.9 122.2 8.6 35.6 6.8 87 87 A A E - 0 0 16 -8,-3.1 -36,-0.4 1,-0.4 2,-0.3 0.807 57.0 -69.7 -89.0 -37.6 7.5 35.0 10.4 88 88 A G E -E 79 0C 7 -9,-1.6 -9,-2.9 -38,-0.1 2,-0.4 -0.982 38.3 -90.7 168.3-178.1 8.2 38.6 11.5 89 89 A V E +E 78 0C 2 -2,-0.3 14,-2.8 14,-0.3 2,-0.3 -0.995 44.1 179.0-126.6 119.6 10.6 41.5 12.2 90 90 A I E -EF 77 102C 0 -13,-2.1 -13,-2.6 -2,-0.4 2,-0.3 -0.816 9.1-163.0-122.6 163.8 11.8 41.8 15.8 91 91 A T E -EF 76 101C 2 10,-2.9 10,-2.0 -2,-0.3 -15,-0.2 -0.985 30.2-141.9-149.1 152.5 14.2 44.0 17.8 92 92 A H S > S+ 0 0 41 -17,-1.5 3,-1.8 -2,-0.3 2,-0.3 0.606 75.5 110.0 -81.1 -19.4 16.1 44.3 21.1 93 93 A T T 3 S+ 0 0 61 1,-0.3 -86,-0.2 -18,-0.2 -2,-0.1 -0.444 87.9 8.4 -63.1 122.6 15.2 48.0 21.1 94 94 A G T 3 S+ 0 0 81 1,-0.3 2,-0.4 -2,-0.3 -1,-0.3 0.599 109.1 110.0 81.4 10.5 12.7 48.8 23.9 95 95 A A S < S- 0 0 20 -3,-1.8 -1,-0.3 4,-0.2 6,-0.1 -0.956 76.4-103.4-121.5 141.2 13.1 45.3 25.3 96 96 A S S > S- 0 0 99 -2,-0.4 3,-2.3 4,-0.1 -3,-0.0 -0.322 75.5 -41.4 -63.0 134.5 14.8 44.3 28.6 97 97 A G T 3 S- 0 0 63 1,-0.3 -2,-0.2 -2,-0.1 0, 0.0 -0.183 124.2 -16.6 51.4-122.2 18.3 42.8 28.3 98 98 A N T 3 S+ 0 0 142 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.150 106.6 116.9-101.0 14.5 18.6 40.3 25.4 99 99 A N < - 0 0 87 -3,-2.3 2,-0.3 -7,-0.1 -4,-0.2 -0.223 56.5-131.0 -74.8 173.1 14.8 39.9 25.0 100 100 A F - 0 0 18 -6,-0.1 2,-0.3 -10,-0.0 -8,-0.2 -0.874 16.2-169.3-126.7 157.9 12.9 40.9 21.8 101 101 A V E -F 91 0C 54 -10,-2.0 -10,-2.9 -2,-0.3 2,-0.1 -0.932 36.4 -98.3-138.4 154.4 9.8 42.9 21.0 102 102 A E E -F 90 0C 99 -2,-0.3 2,-0.4 -12,-0.2 -12,-0.2 -0.463 31.9-117.9 -76.3 150.6 8.1 43.0 17.6 103 103 A b 0 0 12 -14,-2.8 -14,-0.3 -2,-0.1 -97,-0.2 -0.739 360.0 360.0 -86.8 133.8 8.7 45.8 15.2 104 104 A T 0 0 149 -99,-1.6 -99,-3.2 -2,-0.4 -1,-0.1 -0.325 360.0 360.0 -84.8 360.0 5.5 47.7 14.6