==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDORIBONUCLEASE 02-DEC-97 2GSP . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR I.ZEGERS,L.WYNS . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5666.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 58.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 153 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 150.0 5.8 55.5 5.8 2 2 A a - 0 0 49 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.681 360.0-157.2 -85.7 137.2 7.7 52.6 7.3 3 3 A D S S+ 0 0 84 8,-1.8 2,-0.4 1,-0.3 9,-0.2 0.829 91.7 17.8 -78.5 -31.6 6.4 49.0 6.7 4 4 A Y E S-A 11 0A 60 7,-2.0 7,-2.7 -3,-0.1 2,-0.5 -0.997 71.8-162.6-140.0 130.3 8.3 48.0 9.9 5 5 A T E -A 10 0A 46 99,-3.0 99,-1.9 -2,-0.4 2,-0.7 -0.963 6.1-177.0-119.4 114.4 9.5 50.4 12.6 6 6 A b E > -A 9 0A 0 3,-2.4 3,-2.3 -2,-0.5 2,-0.6 -0.864 67.9 -60.5-110.0 94.2 12.1 49.0 15.0 7 7 A G T 3 S- 0 0 42 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.582 120.9 -18.7 69.3-115.7 12.7 51.8 17.5 8 8 A S T 3 S+ 0 0 123 -2,-0.6 2,-0.4 -3,-0.1 -1,-0.3 0.498 115.8 106.9 -99.5 -9.4 14.0 54.6 15.3 9 9 A N E < -A 6 0A 50 -3,-2.3 -3,-2.4 1,-0.0 2,-0.5 -0.588 56.4-154.8 -79.1 130.5 14.9 52.3 12.4 10 10 A a E -A 5 0A 73 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.907 13.8-178.6-109.7 121.1 12.6 52.5 9.4 11 11 A Y E -A 4 0A 4 -7,-2.7 -7,-2.0 -2,-0.5 -8,-1.8 -0.933 13.5-152.1-122.6 142.9 12.3 49.5 7.0 12 12 A S > - 0 0 34 -2,-0.4 4,-1.7 -9,-0.2 3,-0.3 -0.584 37.7-102.7 -99.8 170.5 10.4 48.9 3.8 13 13 A S H > S+ 0 0 58 1,-0.2 4,-2.4 -2,-0.2 5,-0.2 0.849 123.7 54.3 -63.2 -33.0 9.1 45.5 2.6 14 14 A S H > S+ 0 0 76 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.835 103.5 55.3 -70.8 -32.3 12.0 45.4 0.0 15 15 A D H > S+ 0 0 59 -3,-0.3 4,-1.9 2,-0.2 -1,-0.2 0.928 112.1 44.6 -62.1 -45.4 14.5 46.0 2.8 16 16 A V H X S+ 0 0 3 -4,-1.7 4,-2.9 2,-0.2 -2,-0.2 0.908 111.5 51.1 -65.7 -44.6 13.1 42.9 4.6 17 17 A S H X S+ 0 0 71 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.880 111.0 49.4 -61.9 -40.7 12.9 40.8 1.4 18 18 A T H X S+ 0 0 80 -4,-2.0 4,-1.6 2,-0.2 -1,-0.2 0.928 114.1 43.7 -65.1 -46.6 16.6 41.5 0.6 19 19 A A H X S+ 0 0 7 -4,-1.9 4,-2.3 1,-0.2 -2,-0.2 0.932 114.6 50.9 -63.8 -45.6 17.8 40.7 4.1 20 20 A Q H X S+ 0 0 20 -4,-2.9 4,-2.7 1,-0.2 5,-0.2 0.897 106.5 53.8 -59.3 -44.3 15.6 37.6 4.2 21 21 A A H X S+ 0 0 58 -4,-2.4 4,-1.9 1,-0.2 -1,-0.2 0.898 110.0 47.9 -58.9 -41.9 16.9 36.3 0.9 22 22 A A H X S+ 0 0 26 -4,-1.6 4,-1.9 2,-0.2 -1,-0.2 0.920 112.9 47.4 -65.5 -45.8 20.5 36.6 2.1 23 23 A G H X S+ 0 0 0 -4,-2.3 4,-1.9 1,-0.2 -2,-0.2 0.889 112.5 48.8 -63.9 -41.1 19.8 34.8 5.4 24 24 A Y H X S+ 0 0 39 -4,-2.7 4,-2.8 2,-0.2 -1,-0.2 0.878 107.1 55.6 -66.8 -39.0 17.9 32.0 3.7 25 25 A K H X S+ 0 0 121 -4,-1.9 4,-2.1 -5,-0.2 -1,-0.2 0.938 109.9 46.3 -58.1 -49.5 20.6 31.4 1.1 26 26 A L H X>S+ 0 0 30 -4,-1.9 5,-2.4 1,-0.2 4,-0.8 0.895 111.5 52.4 -60.5 -41.0 23.1 30.9 3.9 27 27 A H H ><5S+ 0 0 43 -4,-1.9 3,-0.8 1,-0.2 -2,-0.2 0.913 108.8 49.5 -61.9 -44.8 20.7 28.6 5.7 28 28 A E H 3<5S+ 0 0 126 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.885 112.7 47.6 -60.9 -42.0 20.3 26.5 2.6 29 29 A D H 3<5S- 0 0 83 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.539 109.9-121.9 -77.9 -8.8 24.0 26.2 2.1 30 30 A G T <<5 + 0 0 68 -3,-0.8 2,-0.3 -4,-0.8 -3,-0.2 0.869 69.0 129.4 69.4 34.8 24.7 25.3 5.8 31 31 A E < - 0 0 115 -5,-2.4 2,-0.3 -6,-0.1 -1,-0.3 -0.825 39.5-160.1-119.6 159.9 27.0 28.3 6.2 32 32 A T - 0 0 77 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.923 3.6-152.5-136.8 161.8 27.2 31.1 8.8 33 33 A V B > +B 38 0B 39 5,-2.5 5,-2.4 -2,-0.3 37,-0.2 -0.986 53.7 23.7-136.7 146.2 28.6 34.6 9.1 34 34 A G T > 5S- 0 0 32 -2,-0.3 3,-1.3 35,-0.3 38,-0.1 0.020 91.6 -74.1 88.4 163.8 29.8 36.6 12.1 35 35 A S T 3 5S+ 0 0 108 1,-0.3 -1,-0.2 36,-0.1 37,-0.0 0.692 131.1 52.3 -69.9 -20.2 31.0 35.7 15.6 36 36 A N T 3 5S- 0 0 95 -3,-0.2 -1,-0.3 4,-0.0 -2,-0.1 0.228 113.2-118.9-100.3 12.2 27.4 34.8 16.7 37 37 A S T < 5 - 0 0 57 -3,-1.3 -3,-0.2 1,-0.2 -2,-0.1 0.946 38.0-131.0 51.4 73.5 26.9 32.5 13.7 38 38 A Y B + 0 0 31 1,-0.1 3,-1.3 2,-0.1 -2,-0.0 0.918 43.2 161.5 62.8 46.1 10.7 32.2 20.3 45 45 A Y T 3 S+ 0 0 198 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.808 72.6 65.3 -62.5 -29.2 11.1 32.3 24.1 46 46 A E T 3 S- 0 0 56 1,-0.0 -1,-0.3 55,-0.0 -2,-0.1 0.714 106.0-132.8 -64.6 -25.7 9.1 35.5 23.8 47 47 A G < - 0 0 56 -3,-1.3 -2,-0.1 1,-0.2 2,-0.1 0.873 32.9-178.2 74.6 38.6 6.1 33.6 22.6 48 48 A F - 0 0 32 1,-0.1 2,-1.5 53,-0.0 -1,-0.2 -0.410 33.2-120.6 -67.6 145.5 5.2 35.8 19.6 49 49 A D - 0 0 162 -2,-0.1 2,-0.1 2,-0.0 -1,-0.1 -0.591 39.1-172.6 -90.8 76.6 2.1 34.5 17.8 50 50 A F - 0 0 18 -2,-1.5 38,-0.1 1,-0.1 37,-0.1 -0.441 24.7-141.8 -71.1 142.1 3.7 34.0 14.4 51 51 A S S S+ 0 0 126 36,-0.4 2,-0.3 -2,-0.1 -1,-0.1 0.560 81.3 63.8 -79.2 -13.8 1.4 33.1 11.5 52 52 A V S S- 0 0 25 35,-0.1 -2,-0.1 33,-0.1 2,-0.1 -0.802 89.9 -96.3-113.3 159.1 3.8 30.6 9.9 53 53 A S - 0 0 89 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.311 48.2 -88.9 -74.2 153.5 5.2 27.3 11.2 54 54 A S S S+ 0 0 80 27,-0.1 2,-0.2 -4,-0.1 -1,-0.1 -0.294 79.7 92.0 -82.0 172.3 8.5 26.7 13.0 55 55 A P - 0 0 41 0, 0.0 27,-0.7 0, 0.0 2,-0.3 0.527 65.0-165.3 -68.8 154.6 11.5 26.1 13.0 56 56 A Y E -CD 42 81C 27 -14,-0.6 -14,-2.5 25,-0.2 2,-0.4 -0.846 9.2-162.2-112.3 151.1 12.4 29.8 13.0 57 57 A Y E -CD 41 80C 36 23,-2.6 23,-2.1 -2,-0.3 2,-0.4 -0.982 10.8-139.8-133.3 142.2 15.8 31.4 12.2 58 58 A E E +CD 40 79C 17 -18,-2.8 -18,-1.2 -2,-0.4 21,-0.2 -0.829 19.9 175.8-106.7 144.5 17.0 34.9 12.9 59 59 A W E - D 0 78C 2 19,-2.0 19,-3.3 -2,-0.4 -36,-0.1 -0.983 33.0-108.9-146.0 130.9 19.1 37.0 10.6 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.279 22.8-160.4 -64.1 141.1 20.2 40.7 11.2 61 61 A I - 0 0 8 15,-1.4 2,-0.4 12,-0.3 15,-0.4 -0.994 16.3-144.9-120.8 127.7 18.6 43.5 9.2 62 62 A L > - 0 0 36 4,-0.6 3,-1.6 -2,-0.4 12,-0.1 -0.832 15.8-142.2-101.7 138.3 20.7 46.7 9.1 63 63 A S T 3 S+ 0 0 83 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.705 100.2 69.8 -66.1 -19.6 19.5 50.3 9.1 64 64 A S T 3 S- 0 0 80 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.717 110.0-120.8 -70.0 -22.0 22.4 51.1 6.7 65 65 A G S < S+ 0 0 55 -3,-1.6 -2,-0.1 1,-0.4 2,-0.1 0.312 72.8 124.8 97.0 -8.5 20.7 49.1 4.0 66 66 A D - 0 0 116 1,-0.1 -4,-0.6 -5,-0.0 2,-0.4 -0.414 67.7-108.7 -81.0 159.6 23.6 46.8 3.6 67 67 A V - 0 0 64 -2,-0.1 -6,-0.1 -6,-0.1 -1,-0.1 -0.744 44.6 -98.4 -88.6 135.9 23.3 43.0 3.9 68 68 A Y + 0 0 9 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.306 51.5 159.3 -56.7 130.3 24.9 41.6 7.1 69 69 A S - 0 0 105 1,-0.5 -35,-0.3 -2,-0.0 2,-0.2 0.324 61.3 -55.8-134.4 3.8 28.4 40.2 6.5 70 70 A G S S+ 0 0 32 -37,-0.2 -1,-0.5 2,-0.1 2,-0.1 -0.660 90.0 67.6 137.3 167.6 29.9 40.2 10.0 71 71 A G S S+ 0 0 54 -2,-0.2 -36,-0.1 -3,-0.1 -1,-0.1 -0.480 97.9 3.2 86.1-161.9 30.6 42.5 12.9 72 72 A S - 0 0 105 1,-0.2 -2,-0.1 -2,-0.1 3,-0.1 -0.352 58.7-158.1 -61.0 128.3 28.0 44.1 15.1 73 73 A P - 0 0 19 0, 0.0 3,-0.3 0, 0.0 -12,-0.3 0.472 30.0-139.9 -86.6 -2.4 24.5 42.9 14.0 74 74 A G - 0 0 41 1,-0.2 -12,-0.1 -14,-0.1 -3,-0.0 -0.271 37.0 -66.0 72.9-163.6 22.7 45.9 15.6 75 75 A A S S+ 0 0 27 -69,-0.1 17,-1.9 -3,-0.1 2,-0.3 0.593 103.1 88.5-101.7 -9.5 19.4 45.4 17.4 76 76 A D E + E 0 91C 2 -15,-0.4 -15,-1.4 -3,-0.3 2,-0.3 -0.676 47.5 177.9-100.6 147.4 17.2 44.3 14.5 77 77 A R E -DE 60 90C 9 13,-2.7 13,-2.4 -2,-0.3 2,-0.4 -0.990 23.5-142.4-144.1 149.3 16.4 40.9 13.1 78 78 A V E -DE 59 89C 0 -19,-3.3 -19,-2.0 -2,-0.3 2,-0.5 -0.886 21.6-151.3-107.4 136.9 14.2 39.3 10.4 79 79 A V E +DE 58 88C 0 9,-2.7 8,-3.3 -2,-0.4 9,-1.4 -0.970 22.0 168.4-113.6 121.1 12.8 35.9 11.4 80 80 A F E -DE 57 86C 0 -23,-2.1 -23,-2.6 -2,-0.5 6,-0.2 -0.822 20.4-135.4-125.6 166.2 12.1 33.4 8.7 81 81 A N E > -D 56 0C 3 4,-1.5 3,-1.8 -2,-0.3 -25,-0.2 -0.459 40.6 -78.9-111.7-170.4 11.2 29.7 8.6 82 82 A E T 3 S+ 0 0 73 -27,-0.7 -26,-0.1 1,-0.3 -28,-0.1 0.796 128.1 50.8 -59.3 -31.8 12.2 26.5 6.7 83 83 A N T 3 S- 0 0 115 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.188 119.7-107.2 -93.2 16.8 10.0 27.5 3.7 84 84 A N < + 0 0 60 -3,-1.8 2,-0.4 1,-0.2 -2,-0.1 0.889 69.6 151.3 59.3 38.8 11.5 30.9 3.5 85 85 A Q - 0 0 87 -32,-0.1 -4,-1.5 -65,-0.0 2,-0.4 -0.870 51.2-114.9-101.1 136.7 8.3 32.5 4.8 86 86 A L E +E 80 0C 55 -2,-0.4 -6,-0.2 -6,-0.2 -35,-0.1 -0.587 31.2 179.2 -72.6 122.2 8.6 35.7 6.8 87 87 A A E - 0 0 15 -8,-3.3 -36,-0.4 -2,-0.4 2,-0.3 0.801 57.4 -68.0 -90.1 -36.6 7.6 35.1 10.4 88 88 A G E -E 79 0C 8 -9,-1.4 -9,-2.7 -38,-0.1 2,-0.5 -0.964 38.4 -93.2 166.7 178.2 8.2 38.7 11.5 89 89 A V E +E 78 0C 3 -2,-0.3 14,-2.7 14,-0.2 2,-0.3 -0.993 45.0 178.3-122.4 123.6 10.6 41.6 12.2 90 90 A I E -EF 77 102C 0 -13,-2.4 -13,-2.7 -2,-0.5 2,-0.3 -0.845 10.0-162.0-126.0 166.1 11.8 41.9 15.8 91 91 A T E -EF 76 101C 2 10,-2.8 10,-2.2 -2,-0.3 -15,-0.2 -0.992 30.5-142.0-151.4 152.1 14.2 44.1 17.8 92 92 A H S > S+ 0 0 41 -17,-1.9 3,-1.8 -2,-0.3 2,-0.2 0.618 75.9 109.5 -80.5 -19.1 16.1 44.3 21.0 93 93 A T T 3 S+ 0 0 61 1,-0.3 -86,-0.2 -18,-0.2 -2,-0.1 -0.447 87.7 9.8 -63.4 123.4 15.2 48.1 21.1 94 94 A G T 3 S+ 0 0 79 1,-0.3 2,-0.4 -2,-0.2 -1,-0.3 0.611 108.9 105.0 82.6 11.0 12.7 48.8 23.8 95 95 A A S < S- 0 0 22 -3,-1.8 -1,-0.3 4,-0.2 6,-0.1 -0.963 75.1-109.6-124.4 141.8 13.1 45.4 25.4 96 96 A S S > S- 0 0 91 -2,-0.4 3,-2.0 4,-0.1 -3,-0.0 -0.392 75.6 -26.1 -72.4 147.2 15.0 44.6 28.6 97 97 A G T 3 S- 0 0 67 1,-0.2 -2,-0.2 -2,-0.1 0, 0.0 -0.220 125.1 -26.2 54.8-130.4 18.3 42.7 28.4 98 98 A N T 3 S+ 0 0 140 2,-0.0 -1,-0.2 0, 0.0 -2,-0.1 0.007 105.1 120.2-105.9 26.0 18.6 40.4 25.3 99 99 A N < - 0 0 80 -3,-2.0 2,-0.3 -7,-0.2 -4,-0.2 -0.308 54.1-132.6 -80.8 171.5 14.8 40.0 24.9 100 100 A F - 0 0 17 -2,-0.1 2,-0.3 -6,-0.1 -8,-0.2 -0.892 15.4-167.9-127.3 156.7 13.0 41.0 21.8 101 101 A V E -F 91 0C 57 -10,-2.2 -10,-2.8 -2,-0.3 2,-0.2 -0.905 37.4 -97.3-133.5 157.6 9.8 43.0 21.0 102 102 A E E -F 90 0C 96 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.3 -0.526 33.1-116.4 -79.6 147.5 8.1 43.1 17.6 103 103 A b 0 0 14 -14,-2.7 -14,-0.2 -2,-0.2 -97,-0.2 -0.637 360.0 360.0 -78.4 140.1 8.7 46.0 15.2 104 104 A T 0 0 151 -99,-1.9 -99,-3.0 -2,-0.3 -1,-0.1 -0.342 360.0 360.0 -88.7 360.0 5.5 47.9 14.6