==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDORIBONUCLEASE 02-DEC-97 3GSP . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR I.ZEGERS,L.WYNS . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5696.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 57.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 151 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 151.9 5.9 55.6 5.8 2 2 A a - 0 0 50 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.641 360.0-157.6 -85.7 139.6 7.7 52.6 7.3 3 3 A D S S+ 0 0 85 8,-2.0 2,-0.4 1,-0.3 9,-0.2 0.831 91.8 19.4 -80.2 -32.2 6.4 49.1 6.7 4 4 A Y E S-A 11 0A 63 7,-2.2 7,-2.7 -3,-0.1 2,-0.5 -0.999 71.3-162.9-138.9 129.7 8.3 48.0 9.9 5 5 A T E -A 10 0A 48 99,-2.9 99,-1.8 -2,-0.4 2,-0.7 -0.958 7.6-179.9-119.1 112.0 9.5 50.4 12.6 6 6 A b E > -A 9 0A 0 3,-2.3 3,-2.3 -2,-0.5 2,-0.5 -0.876 69.3 -57.7-110.7 96.0 12.1 49.0 15.1 7 7 A G T 3 S- 0 0 43 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.588 120.3 -22.1 69.1-120.6 12.8 51.8 17.5 8 8 A S T 3 S+ 0 0 119 -2,-0.5 2,-0.4 -3,-0.1 -1,-0.3 0.414 115.2 109.0-100.2 -1.4 13.9 54.7 15.3 9 9 A N E < -A 6 0A 43 -3,-2.3 -3,-2.3 -7,-0.0 2,-0.5 -0.646 56.3-154.7 -82.0 129.1 14.9 52.4 12.4 10 10 A a E -A 5 0A 73 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.911 13.9-178.6-109.3 121.8 12.6 52.5 9.4 11 11 A Y E -A 4 0A 4 -7,-2.7 -7,-2.2 -2,-0.5 -8,-2.0 -0.932 12.6-154.5-123.4 143.9 12.3 49.5 7.0 12 12 A S > - 0 0 40 -2,-0.4 4,-1.8 -9,-0.2 3,-0.3 -0.593 38.9-101.4-103.2 171.1 10.3 48.9 3.9 13 13 A S H > S+ 0 0 60 1,-0.2 4,-2.8 -2,-0.2 5,-0.2 0.837 123.4 57.0 -61.5 -33.5 9.2 45.5 2.5 14 14 A S H > S+ 0 0 82 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.873 104.3 50.7 -65.2 -40.4 12.1 45.6 0.1 15 15 A D H > S+ 0 0 62 -3,-0.3 4,-2.2 2,-0.2 -2,-0.2 0.927 113.3 46.4 -61.5 -46.0 14.7 46.0 2.9 16 16 A V H X S+ 0 0 3 -4,-1.8 4,-2.9 2,-0.2 -2,-0.2 0.930 111.6 49.8 -64.0 -49.5 13.1 43.0 4.6 17 17 A S H X S+ 0 0 75 -4,-2.8 4,-2.4 1,-0.2 -1,-0.2 0.886 111.3 50.1 -58.4 -41.5 13.0 40.8 1.5 18 18 A T H X S+ 0 0 80 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.938 113.4 43.9 -63.9 -46.7 16.6 41.6 0.6 19 19 A A H X S+ 0 0 7 -4,-2.2 4,-2.4 1,-0.2 -2,-0.2 0.934 113.9 51.5 -63.7 -45.4 17.8 40.7 4.2 20 20 A Q H X S+ 0 0 19 -4,-2.9 4,-2.9 1,-0.2 5,-0.2 0.898 107.5 52.6 -58.0 -45.1 15.6 37.6 4.3 21 21 A A H X S+ 0 0 56 -4,-2.4 4,-1.9 2,-0.2 -1,-0.2 0.900 110.3 47.1 -59.1 -45.2 17.0 36.3 0.9 22 22 A A H X S+ 0 0 27 -4,-1.8 4,-1.8 2,-0.2 -1,-0.2 0.924 115.1 46.6 -63.0 -46.1 20.6 36.6 2.0 23 23 A G H X S+ 0 0 0 -4,-2.4 4,-2.1 1,-0.2 -2,-0.2 0.902 111.4 49.6 -64.5 -43.3 19.9 34.9 5.3 24 24 A Y H X S+ 0 0 38 -4,-2.9 4,-2.4 1,-0.2 -1,-0.2 0.860 107.5 55.6 -65.6 -35.2 17.9 32.0 3.8 25 25 A K H X S+ 0 0 125 -4,-1.9 4,-2.1 -5,-0.2 -1,-0.2 0.936 108.3 47.5 -62.7 -46.5 20.6 31.4 1.2 26 26 A L H X>S+ 0 0 29 -4,-1.8 5,-2.4 1,-0.2 4,-0.6 0.915 111.0 52.4 -60.1 -42.6 23.2 30.9 3.9 27 27 A H H ><5S+ 0 0 43 -4,-2.1 3,-0.9 1,-0.2 -1,-0.2 0.909 108.8 49.6 -59.8 -44.9 20.8 28.6 5.8 28 28 A E H 3<5S+ 0 0 126 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.867 112.7 46.9 -61.6 -40.7 20.3 26.5 2.7 29 29 A D H 3<5S- 0 0 83 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.489 110.9-121.3 -81.3 -3.4 24.1 26.2 2.1 30 30 A G T <<5 + 0 0 68 -3,-0.9 2,-0.3 -4,-0.6 -3,-0.2 0.883 68.9 128.7 65.7 38.0 24.7 25.4 5.8 31 31 A E < - 0 0 114 -5,-2.4 2,-0.3 -6,-0.1 -1,-0.2 -0.852 39.5-159.7-123.3 161.2 27.0 28.3 6.3 32 32 A T - 0 0 76 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.907 3.8-154.0-136.9 162.2 27.2 31.2 8.8 33 33 A V B > +B 38 0B 41 5,-2.4 5,-2.8 -2,-0.3 37,-0.2 -0.972 54.2 28.8-136.9 149.3 28.7 34.7 9.2 34 34 A G T > 5S- 0 0 31 -2,-0.3 3,-1.3 35,-0.3 38,-0.1 0.071 91.0 -77.7 88.0 162.2 29.7 36.7 12.2 35 35 A S T 3 5S+ 0 0 109 1,-0.3 -1,-0.2 36,-0.1 37,-0.1 0.704 131.1 51.5 -70.0 -21.9 31.0 35.7 15.7 36 36 A N T 3 5S- 0 0 93 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.191 114.5-117.6-100.3 13.8 27.5 34.8 16.8 37 37 A S T < 5 - 0 0 55 -3,-1.3 -3,-0.2 1,-0.1 -2,-0.1 0.946 36.8-129.0 50.4 77.8 26.9 32.6 13.7 38 38 A Y B + 0 0 32 1,-0.1 3,-1.1 2,-0.1 -2,-0.0 0.916 44.1 161.9 62.1 46.8 10.7 32.2 20.3 45 45 A Y T 3 S+ 0 0 199 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.779 72.2 64.7 -63.5 -27.1 11.1 32.3 24.1 46 46 A E T 3 S- 0 0 55 1,-0.0 -1,-0.3 55,-0.0 -2,-0.1 0.737 105.7-132.0 -67.6 -26.1 9.2 35.6 23.8 47 47 A G < + 0 0 56 -3,-1.1 2,-0.1 1,-0.2 -2,-0.1 0.891 34.4 179.5 75.9 39.5 6.2 33.6 22.6 48 48 A F - 0 0 32 1,-0.1 2,-1.4 53,-0.0 -1,-0.2 -0.473 33.4-122.0 -70.2 144.6 5.2 35.8 19.6 49 49 A D - 0 0 142 -2,-0.1 -1,-0.1 2,-0.0 2,-0.1 -0.602 37.7-173.6 -91.8 77.2 2.2 34.5 17.7 50 50 A F - 0 0 27 -2,-1.4 38,-0.1 1,-0.1 37,-0.1 -0.389 26.0-139.1 -69.6 145.8 3.7 34.0 14.2 51 51 A S S S+ 0 0 129 36,-0.4 2,-0.3 35,-0.1 -1,-0.1 0.631 83.0 64.6 -79.9 -18.5 1.4 33.0 11.3 52 52 A V S S- 0 0 25 35,-0.1 -2,-0.1 1,-0.1 2,-0.1 -0.718 89.3 -98.6-106.9 160.4 3.9 30.6 9.9 53 53 A S - 0 0 89 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.350 47.3 -82.1 -79.7 155.4 5.3 27.3 11.3 54 54 A S S S+ 0 0 84 27,-0.1 2,-0.2 -2,-0.1 -1,-0.1 -0.280 80.7 87.1 -79.3 171.1 8.6 26.7 13.1 55 55 A P - 0 0 41 0, 0.0 27,-0.7 0, 0.0 2,-0.3 0.527 65.4-165.0 -70.3 156.5 11.5 26.1 13.0 56 56 A Y E -CD 42 81C 28 -14,-0.6 -14,-2.3 25,-0.2 2,-0.4 -0.845 9.1-161.2-113.3 151.7 12.5 29.8 12.9 57 57 A Y E -CD 41 80C 37 23,-2.6 23,-2.2 -2,-0.3 2,-0.4 -0.991 10.4-140.6-133.6 139.2 15.8 31.4 12.1 58 58 A E E +CD 40 79C 17 -18,-2.8 -18,-1.2 -2,-0.4 21,-0.2 -0.822 19.3 176.0-105.0 142.4 17.1 34.9 12.9 59 59 A W E - D 0 78C 2 19,-2.1 19,-3.3 -2,-0.4 -36,-0.1 -0.993 32.9-109.8-142.0 133.2 19.1 37.0 10.6 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.319 22.7-159.7 -66.9 142.4 20.2 40.7 11.2 61 61 A I - 0 0 7 15,-1.7 2,-0.4 12,-0.3 15,-0.4 -0.994 15.6-145.4-120.9 129.2 18.7 43.5 9.2 62 62 A L > - 0 0 39 4,-0.6 3,-1.6 -2,-0.4 12,-0.1 -0.838 16.4-142.0-103.8 139.0 20.8 46.7 9.1 63 63 A S T 3 S+ 0 0 83 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.673 99.6 71.1 -66.9 -17.0 19.6 50.3 9.1 64 64 A S T 3 S- 0 0 80 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.732 109.2-121.2 -71.2 -22.3 22.5 51.1 6.7 65 65 A G S < S+ 0 0 54 -3,-1.6 2,-0.1 1,-0.4 -2,-0.1 0.309 73.6 122.8 96.9 -9.2 20.7 49.2 4.0 66 66 A D - 0 0 116 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.4 -0.446 69.3-107.1 -82.2 160.2 23.6 46.8 3.6 67 67 A V - 0 0 63 -2,-0.1 -6,-0.1 -6,-0.1 2,-0.1 -0.716 44.3 -99.3 -88.1 136.1 23.4 43.0 3.9 68 68 A Y + 0 0 7 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.335 50.6 160.6 -56.2 130.8 24.9 41.7 7.1 69 69 A S - 0 0 105 1,-0.5 -35,-0.3 -2,-0.1 2,-0.2 0.249 60.9 -56.3-136.0 8.1 28.4 40.3 6.5 70 70 A G S S+ 0 0 32 -37,-0.2 -1,-0.5 2,-0.1 2,-0.1 -0.647 91.0 67.6 134.3 169.4 29.9 40.3 10.0 71 71 A G S S+ 0 0 55 -2,-0.2 -36,-0.1 -3,-0.1 -1,-0.1 -0.446 98.4 4.3 82.4-160.4 30.7 42.5 12.9 72 72 A S - 0 0 103 1,-0.1 -2,-0.1 -2,-0.1 3,-0.1 -0.357 58.0-159.2 -62.1 127.2 28.0 44.1 15.1 73 73 A P - 0 0 17 0, 0.0 3,-0.3 0, 0.0 -12,-0.3 0.493 30.2-140.6 -85.3 -4.0 24.5 42.9 14.0 74 74 A G - 0 0 41 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.293 36.9 -66.2 73.0-163.1 22.8 45.9 15.6 75 75 A A S S+ 0 0 27 -69,-0.1 17,-1.6 -3,-0.1 2,-0.3 0.602 103.2 88.2-101.6 -11.3 19.4 45.4 17.4 76 76 A D E + E 0 91C 2 -15,-0.4 -15,-1.7 -3,-0.3 2,-0.3 -0.683 48.1 178.4 -98.7 144.7 17.1 44.4 14.5 77 77 A R E -DE 60 90C 9 13,-2.7 13,-2.1 -2,-0.3 2,-0.4 -0.973 23.5-142.2-140.5 151.0 16.4 40.9 13.1 78 78 A V E -DE 59 89C 0 -19,-3.3 -19,-2.1 -2,-0.3 2,-0.5 -0.916 21.8-151.9-109.1 135.7 14.3 39.3 10.4 79 79 A V E +DE 58 88C 0 9,-2.7 8,-3.0 -2,-0.4 9,-1.5 -0.967 22.0 167.3-113.3 122.8 12.8 35.9 11.4 80 80 A F E -DE 57 86C 0 -23,-2.2 -23,-2.6 -2,-0.5 6,-0.2 -0.855 20.8-134.5-128.7 167.1 12.1 33.4 8.7 81 81 A N E > -D 56 0C 4 4,-1.6 3,-1.7 -2,-0.3 -25,-0.2 -0.443 40.7 -78.7-112.7-170.5 11.2 29.7 8.6 82 82 A E T 3 S+ 0 0 73 -27,-0.7 -26,-0.1 1,-0.3 -28,-0.1 0.760 127.4 51.7 -59.9 -28.9 12.2 26.5 6.7 83 83 A N T 3 S- 0 0 116 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.164 119.2-107.3 -94.9 16.5 10.1 27.5 3.7 84 84 A N S < S+ 0 0 61 -3,-1.7 2,-0.4 1,-0.2 -2,-0.1 0.879 70.3 150.6 58.9 37.3 11.6 31.0 3.4 85 85 A Q - 0 0 86 -32,-0.1 -4,-1.6 -65,-0.0 2,-0.4 -0.867 51.5-115.7-100.2 136.8 8.4 32.5 4.8 86 86 A L E +E 80 0C 58 -2,-0.4 -6,-0.2 -6,-0.2 -35,-0.1 -0.596 30.5 179.7 -74.5 122.0 8.6 35.7 6.8 87 87 A A E - 0 0 16 -8,-3.0 -36,-0.4 -2,-0.4 2,-0.3 0.827 56.9 -70.8 -88.6 -38.6 7.6 35.1 10.4 88 88 A G E -E 79 0C 8 -9,-1.5 -9,-2.7 -38,-0.1 2,-0.5 -0.964 38.5 -89.8 165.4 177.0 8.2 38.7 11.4 89 89 A V E +E 78 0C 3 -2,-0.3 14,-2.7 14,-0.2 2,-0.3 -0.985 44.2 177.5-120.3 124.3 10.6 41.6 12.2 90 90 A I E -EF 77 102C 0 -13,-2.1 -13,-2.7 -2,-0.5 2,-0.3 -0.819 9.6-163.7-125.4 166.2 11.9 41.9 15.8 91 91 A T E -EF 76 101C 2 10,-2.8 10,-2.1 -2,-0.3 -15,-0.2 -0.991 30.8-141.4-151.8 153.9 14.2 44.1 17.8 92 92 A H S > S+ 0 0 38 -17,-1.6 3,-1.9 -2,-0.3 2,-0.2 0.604 75.7 110.0 -83.4 -18.8 16.2 44.4 21.1 93 93 A T T 3 S+ 0 0 60 1,-0.3 -86,-0.2 -18,-0.2 -2,-0.1 -0.441 87.9 10.0 -62.4 123.2 15.3 48.1 21.1 94 94 A G T 3 S+ 0 0 80 1,-0.3 2,-0.4 -2,-0.2 -1,-0.3 0.603 108.8 106.6 83.2 9.7 12.8 48.9 23.9 95 95 A A S < S- 0 0 23 -3,-1.9 -1,-0.3 4,-0.2 6,-0.1 -0.944 76.1-102.9-122.7 145.1 13.2 45.4 25.4 96 96 A S S > S- 0 0 96 -2,-0.4 3,-2.3 4,-0.1 -3,-0.0 -0.369 76.7 -37.2 -66.6 142.5 15.0 44.4 28.7 97 97 A G T 3 S- 0 0 69 1,-0.3 -2,-0.2 -2,-0.1 0, 0.0 -0.126 125.1 -18.8 46.4-125.1 18.4 42.8 28.4 98 98 A N T 3 S+ 0 0 142 2,-0.0 -1,-0.3 0, 0.0 -2,-0.1 0.065 105.2 117.8-102.1 22.7 18.6 40.4 25.4 99 99 A N < - 0 0 88 -3,-2.3 2,-0.3 -7,-0.1 -4,-0.2 -0.328 54.8-133.2 -80.8 170.4 14.9 40.0 24.9 100 100 A F - 0 0 17 -2,-0.1 2,-0.3 -6,-0.1 -8,-0.2 -0.875 15.1-168.1-125.6 157.3 13.0 41.1 21.8 101 101 A V E -F 91 0C 57 -10,-2.1 -10,-2.8 -2,-0.3 2,-0.2 -0.898 37.0 -97.6-134.7 158.3 9.8 43.0 21.0 102 102 A E E -F 90 0C 90 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.3 -0.508 32.7-116.3 -79.9 150.4 8.2 43.1 17.6 103 103 A b 0 0 13 -14,-2.7 -14,-0.2 -2,-0.2 -97,-0.2 -0.685 360.0 360.0 -82.3 139.1 8.7 46.0 15.2 104 104 A T 0 0 149 -99,-1.8 -99,-2.9 -2,-0.3 -1,-0.1 -0.485 360.0 360.0 -86.0 360.0 5.5 47.9 14.6