==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDORIBONUCLEASE 02-DEC-97 4GSP . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR I.ZEGERS,L.WYNS . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5704.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 152 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 151.8 5.9 55.5 5.8 2 2 A a - 0 0 48 1,-0.2 10,-0.2 10,-0.1 3,-0.2 -0.689 360.0-157.1 -87.8 137.3 7.7 52.5 7.3 3 3 A D S S+ 0 0 86 8,-1.7 2,-0.4 -2,-0.3 9,-0.2 0.838 92.3 18.9 -77.3 -31.9 6.4 49.0 6.7 4 4 A Y E S-A 11 0A 60 7,-2.2 7,-2.9 -3,-0.1 2,-0.5 -0.999 71.1-163.1-139.5 131.2 8.3 48.0 9.9 5 5 A T E -A 10 0A 48 99,-3.1 99,-1.7 -2,-0.4 2,-0.7 -0.965 5.8-177.1-119.9 113.5 9.5 50.4 12.6 6 6 A b E > -A 9 0A 1 3,-2.4 3,-2.3 -2,-0.5 2,-0.6 -0.855 67.4 -62.3-110.4 93.0 12.2 49.0 15.0 7 7 A G T 3 S- 0 0 43 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.572 121.1 -17.1 68.5-113.8 12.7 51.8 17.5 8 8 A S T 3 S+ 0 0 124 -2,-0.6 2,-0.3 -3,-0.1 -1,-0.3 0.542 116.1 104.8 -98.6 -11.4 14.1 54.6 15.4 9 9 A N E < -A 6 0A 49 -3,-2.3 -3,-2.4 1,-0.0 2,-0.5 -0.567 56.7-155.0 -78.8 132.3 14.9 52.3 12.4 10 10 A a E -A 5 0A 73 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.928 13.7-177.7-111.5 120.7 12.6 52.5 9.4 11 11 A Y E -A 4 0A 6 -7,-2.9 -7,-2.2 -2,-0.5 -8,-1.7 -0.928 13.2-152.0-122.7 143.3 12.3 49.5 7.0 12 12 A S > - 0 0 34 -2,-0.4 4,-1.8 -9,-0.2 3,-0.2 -0.559 36.9-104.1-100.2 170.0 10.4 48.9 3.9 13 13 A S H > S+ 0 0 60 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.858 123.4 54.9 -62.2 -35.2 9.2 45.5 2.6 14 14 A S H > S+ 0 0 77 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.853 104.3 53.7 -67.4 -34.5 12.0 45.5 0.0 15 15 A D H > S+ 0 0 61 -3,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.924 112.5 44.9 -62.4 -46.0 14.6 46.0 2.8 16 16 A V H X S+ 0 0 2 -4,-1.8 4,-2.9 2,-0.2 -2,-0.2 0.913 111.9 50.4 -65.2 -45.7 13.2 43.0 4.6 17 17 A S H X S+ 0 0 73 -4,-2.7 4,-2.5 1,-0.2 -1,-0.2 0.888 110.7 50.4 -61.0 -41.5 13.0 40.8 1.5 18 18 A T H X S+ 0 0 81 -4,-2.1 4,-1.5 2,-0.2 -1,-0.2 0.932 113.9 43.8 -63.2 -46.0 16.6 41.6 0.6 19 19 A A H X S+ 0 0 7 -4,-2.0 4,-2.2 1,-0.2 -2,-0.2 0.939 114.1 50.9 -64.2 -47.1 17.8 40.7 4.1 20 20 A Q H X S+ 0 0 19 -4,-2.9 4,-2.8 1,-0.2 5,-0.2 0.897 106.2 54.4 -57.9 -45.2 15.7 37.6 4.3 21 21 A A H X S+ 0 0 58 -4,-2.5 4,-2.0 1,-0.2 -1,-0.2 0.887 109.8 48.0 -58.0 -40.7 16.9 36.3 0.9 22 22 A A H X S+ 0 0 24 -4,-1.5 4,-1.9 2,-0.2 -1,-0.2 0.926 113.5 45.8 -67.1 -46.4 20.6 36.6 2.1 23 23 A G H X S+ 0 0 0 -4,-2.2 4,-1.9 1,-0.2 -2,-0.2 0.877 113.1 49.9 -65.3 -38.8 19.9 34.8 5.4 24 24 A Y H X S+ 0 0 39 -4,-2.8 4,-2.7 2,-0.2 -1,-0.2 0.904 107.3 54.4 -66.7 -41.7 17.9 32.0 3.8 25 25 A K H X S+ 0 0 112 -4,-2.0 4,-1.9 -5,-0.2 -2,-0.2 0.931 110.2 46.7 -57.0 -47.4 20.6 31.4 1.1 26 26 A L H X>S+ 0 0 31 -4,-1.9 5,-2.4 1,-0.2 4,-0.6 0.877 110.9 52.9 -63.5 -36.6 23.2 31.0 3.9 27 27 A H H ><5S+ 0 0 42 -4,-1.9 3,-0.8 1,-0.2 -2,-0.2 0.918 108.5 49.9 -64.6 -44.5 20.8 28.6 5.8 28 28 A E H 3<5S+ 0 0 121 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.853 112.5 46.8 -61.6 -39.3 20.3 26.5 2.6 29 29 A D H 3<5S- 0 0 80 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.517 110.3-122.1 -82.2 -5.9 24.1 26.2 2.1 30 30 A G T <<5 + 0 0 68 -3,-0.8 2,-0.3 -4,-0.6 -3,-0.2 0.892 68.6 128.0 66.6 39.4 24.7 25.4 5.8 31 31 A E < - 0 0 114 -5,-2.4 2,-0.3 -6,-0.1 -1,-0.2 -0.847 39.9-158.9-123.9 161.0 27.1 28.3 6.3 32 32 A T - 0 0 77 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.918 3.6-152.9-137.7 161.9 27.2 31.2 8.8 33 33 A V B > +B 38 0B 38 5,-2.4 5,-2.7 -2,-0.3 37,-0.2 -0.970 54.7 28.7-135.1 150.0 28.7 34.7 9.1 34 34 A G T > 5S- 0 0 29 -2,-0.3 3,-1.5 35,-0.3 38,-0.1 0.125 90.7 -79.1 85.6 158.6 29.8 36.7 12.2 35 35 A S T 3 5S+ 0 0 111 1,-0.3 -1,-0.2 2,-0.1 -3,-0.0 0.692 130.9 53.4 -67.1 -21.0 31.1 35.6 15.6 36 36 A N T 3 5S- 0 0 93 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.280 113.4-120.6 -97.4 8.5 27.5 34.8 16.7 37 37 A S T < 5 - 0 0 55 -3,-1.5 -3,-0.2 1,-0.1 -2,-0.1 0.959 36.5-130.8 53.4 74.6 27.0 32.6 13.7 38 38 A Y B + 0 0 30 1,-0.1 3,-1.2 2,-0.1 -2,-0.0 0.912 43.2 161.8 58.4 45.5 10.8 32.2 20.3 45 45 A Y T 3 S+ 0 0 197 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.820 71.7 64.8 -61.1 -31.3 11.1 32.2 24.1 46 46 A E T 3 S- 0 0 57 1,-0.1 -1,-0.3 55,-0.0 -2,-0.1 0.751 106.7-131.5 -62.9 -27.5 9.2 35.5 23.9 47 47 A G < - 0 0 54 -3,-1.2 -2,-0.1 1,-0.2 -1,-0.1 0.856 33.9-178.2 78.2 36.3 6.2 33.6 22.6 48 48 A F - 0 0 34 1,-0.1 2,-1.3 53,-0.0 -1,-0.2 -0.368 32.1-122.1 -65.1 147.0 5.3 35.7 19.6 49 49 A D - 0 0 159 2,-0.0 2,-0.1 -2,-0.0 -1,-0.1 -0.614 38.4-174.8 -95.0 76.9 2.2 34.5 17.8 50 50 A F - 0 0 19 -2,-1.3 38,-0.1 1,-0.1 37,-0.1 -0.416 26.5-140.3 -71.8 145.4 3.7 34.0 14.3 51 51 A S S S+ 0 0 129 36,-0.4 2,-0.3 -2,-0.1 -1,-0.1 0.588 81.2 66.6 -81.2 -14.0 1.4 33.0 11.4 52 52 A V S S- 0 0 26 35,-0.1 -2,-0.1 1,-0.1 2,-0.0 -0.772 89.3 -95.4-111.0 158.3 3.9 30.5 9.9 53 53 A S - 0 0 88 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.290 49.0 -89.4 -72.1 151.6 5.3 27.2 11.2 54 54 A S S S+ 0 0 83 27,-0.1 2,-0.1 -4,-0.1 -1,-0.1 -0.304 79.9 90.3 -81.1 171.3 8.6 26.7 13.1 55 55 A P - 0 0 52 0, 0.0 27,-0.8 0, 0.0 2,-0.3 0.518 64.8-163.9 -70.1 154.9 11.5 26.1 13.1 56 56 A Y E -CD 42 81C 28 -14,-0.6 -14,-2.6 25,-0.2 2,-0.4 -0.832 9.4-160.9-111.4 150.8 12.5 29.8 13.0 57 57 A Y E -CD 41 80C 39 23,-2.6 23,-2.1 -2,-0.3 2,-0.4 -0.988 10.0-141.9-132.4 138.2 15.8 31.4 12.1 58 58 A E E +CD 40 79C 18 -18,-2.8 -18,-1.2 -2,-0.4 21,-0.2 -0.820 19.3 175.3-104.2 144.1 17.1 34.9 12.9 59 59 A W E - D 0 78C 0 19,-2.0 19,-3.2 -2,-0.4 -36,-0.1 -0.987 33.6-108.0-144.9 132.7 19.1 37.0 10.6 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.5 -0.302 23.0-159.4 -66.2 140.1 20.2 40.7 11.2 61 61 A I B -G 67 0D 8 15,-1.5 2,-0.4 12,-0.3 15,-0.4 -0.983 17.1-143.2-117.7 129.1 18.7 43.5 9.2 62 62 A L > - 0 0 37 4,-0.6 3,-1.9 -2,-0.5 12,-0.1 -0.846 15.7-143.7-102.9 136.2 20.8 46.6 9.1 63 63 A S T 3 S+ 0 0 85 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.707 99.6 70.8 -64.3 -19.2 19.6 50.3 9.2 64 64 A S T 3 S- 0 0 78 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.676 109.9-120.4 -71.3 -18.2 22.5 51.1 6.8 65 65 A G S < S+ 0 0 56 -3,-1.9 2,-0.1 1,-0.4 -2,-0.1 0.323 74.4 124.5 93.0 -8.7 20.7 49.2 4.0 66 66 A D - 0 0 116 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.4 -0.466 68.0-110.6 -82.1 156.0 23.6 46.8 3.7 67 67 A V B -G 61 0D 64 -2,-0.1 -6,-0.1 -3,-0.1 -1,-0.1 -0.709 44.6 -98.1 -86.0 137.9 23.3 43.0 4.0 68 68 A Y + 0 0 7 -8,-0.5 3,-0.1 -2,-0.3 -1,-0.1 -0.298 51.2 159.8 -58.2 135.0 24.9 41.6 7.1 69 69 A S - 0 0 104 1,-0.5 -35,-0.3 -36,-0.0 2,-0.2 0.196 60.8 -54.7-142.2 15.2 28.4 40.2 6.6 70 70 A G S S+ 0 0 30 -37,-0.2 -1,-0.5 1,-0.1 2,-0.1 -0.566 91.1 64.4 129.3 167.2 29.9 40.2 10.0 71 71 A G S S+ 0 0 53 -2,-0.2 -1,-0.1 -3,-0.1 -36,-0.1 -0.415 98.5 5.9 81.5-160.9 30.7 42.4 13.0 72 72 A S - 0 0 106 1,-0.2 -2,-0.1 -2,-0.1 3,-0.1 -0.355 58.3-160.3 -60.8 124.5 28.0 44.1 15.1 73 73 A P - 0 0 17 0, 0.0 3,-0.3 0, 0.0 -12,-0.3 0.476 30.3-140.5 -84.0 -4.0 24.5 42.9 14.0 74 74 A G - 0 0 42 1,-0.2 -12,-0.1 -14,-0.1 -3,-0.0 -0.285 36.3 -65.4 73.9-163.1 22.8 45.8 15.6 75 75 A A S S+ 0 0 27 -69,-0.1 17,-1.9 -3,-0.1 2,-0.3 0.587 103.6 86.4-102.2 -10.1 19.5 45.4 17.4 76 76 A D E + E 0 91C 2 -15,-0.4 -15,-1.5 -3,-0.3 2,-0.3 -0.707 48.3 178.6-101.9 146.7 17.2 44.3 14.6 77 77 A R E -DE 60 90C 8 13,-2.8 13,-2.3 -2,-0.3 2,-0.4 -0.978 23.2-142.2-142.3 150.2 16.4 40.9 13.1 78 78 A V E -DE 59 89C 0 -19,-3.2 -19,-2.0 -2,-0.3 2,-0.5 -0.911 21.3-152.4-107.7 135.7 14.3 39.3 10.4 79 79 A V E +DE 58 88C 0 9,-2.7 8,-3.3 -2,-0.4 9,-1.5 -0.971 21.7 167.9-113.8 120.6 12.8 35.9 11.4 80 80 A F E -DE 57 86C 0 -23,-2.1 -23,-2.6 -2,-0.5 6,-0.2 -0.815 20.9-132.9-125.2 167.1 12.1 33.4 8.6 81 81 A N E > -D 56 0C 3 4,-1.5 3,-2.1 -2,-0.3 -25,-0.2 -0.481 39.6 -79.8-113.0-172.3 11.2 29.7 8.6 82 82 A E T 3 S+ 0 0 74 -27,-0.8 -26,-0.1 1,-0.3 -28,-0.1 0.787 128.2 50.9 -56.8 -31.3 12.3 26.5 6.7 83 83 A N T 3 S- 0 0 112 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.255 119.4-107.6 -92.1 11.0 10.1 27.5 3.7 84 84 A N < + 0 0 62 -3,-2.1 2,-0.5 1,-0.3 -2,-0.1 0.891 69.6 150.9 63.6 38.1 11.5 31.0 3.5 85 85 A Q - 0 0 84 -32,-0.1 -4,-1.5 -65,-0.0 2,-0.4 -0.891 51.4-116.1-101.7 132.5 8.3 32.5 4.9 86 86 A L E -E 80 0C 57 -2,-0.5 -6,-0.2 -6,-0.2 3,-0.1 -0.549 30.4-179.7 -70.2 123.9 8.7 35.7 6.8 87 87 A A E - 0 0 16 -8,-3.3 -36,-0.4 1,-0.4 2,-0.3 0.799 56.6 -72.0 -90.4 -38.6 7.6 35.2 10.4 88 88 A G E -E 79 0C 7 -9,-1.5 -9,-2.7 -38,-0.1 2,-0.5 -0.955 38.3 -89.9 164.7 178.1 8.3 38.8 11.5 89 89 A V E +E 78 0C 2 -2,-0.3 14,-2.7 14,-0.3 2,-0.3 -0.986 44.2 179.0-121.3 124.9 10.7 41.6 12.2 90 90 A I E -EF 77 102C 0 -13,-2.3 -13,-2.8 -2,-0.5 2,-0.3 -0.851 9.3-161.0-126.6 163.8 11.9 41.9 15.8 91 91 A T E -EF 76 101C 2 10,-2.8 10,-2.1 -2,-0.3 -15,-0.2 -0.984 29.9-142.5-147.7 153.8 14.2 44.1 17.8 92 92 A H S > S+ 0 0 42 -17,-1.9 3,-1.8 -2,-0.3 2,-0.2 0.625 76.0 109.4 -81.9 -20.5 16.2 44.4 21.1 93 93 A T T 3 S+ 0 0 62 1,-0.3 -86,-0.2 -18,-0.2 -2,-0.1 -0.428 87.6 9.8 -62.4 122.6 15.3 48.1 21.1 94 94 A G T 3 S+ 0 0 79 1,-0.3 2,-0.4 -2,-0.2 -1,-0.3 0.633 108.7 107.3 82.5 13.1 12.8 48.8 23.9 95 95 A A S < S- 0 0 23 -3,-1.8 -1,-0.3 4,-0.2 6,-0.1 -0.958 75.2-103.3-125.1 144.4 13.2 45.4 25.4 96 96 A S S > S- 0 0 96 -2,-0.4 3,-2.6 4,-0.1 -3,-0.0 -0.347 76.3 -35.9 -66.9 142.9 15.0 44.4 28.6 97 97 A G T 3 S- 0 0 71 1,-0.3 -2,-0.2 -2,-0.1 0, 0.0 -0.182 125.8 -21.0 48.4-119.4 18.4 42.8 28.5 98 98 A N T 3 S+ 0 0 140 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.065 105.3 119.8-108.8 21.3 18.6 40.5 25.5 99 99 A N < - 0 0 88 -3,-2.6 2,-0.3 -7,-0.1 -4,-0.2 -0.270 54.1-132.5 -77.7 171.1 14.9 40.0 25.0 100 100 A F - 0 0 18 -6,-0.1 2,-0.3 -2,-0.0 -8,-0.2 -0.875 15.5-168.3-125.6 158.6 13.0 41.0 21.8 101 101 A V E -F 91 0C 55 -10,-2.1 -10,-2.8 -2,-0.3 2,-0.2 -0.927 37.0 -96.7-137.5 155.2 9.8 42.9 21.0 102 102 A E E -F 90 0C 99 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.3 -0.496 32.8-117.8 -77.2 147.4 8.2 43.1 17.6 103 103 A b 0 0 13 -14,-2.7 -14,-0.3 -2,-0.2 -97,-0.2 -0.668 360.0 360.0 -80.8 137.8 8.8 46.0 15.3 104 104 A T 0 0 148 -99,-1.7 -99,-3.1 -2,-0.3 -1,-0.1 -0.446 360.0 360.0 -84.5 360.0 5.5 47.9 14.6