==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-APR-06 2GTS . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HP0062; . SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; . AUTHOR T.A.BINKOWSKI,X.XU,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK,MIDWES . 77 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6422.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 87.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 60 77.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A V 0 0 162 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 151.5 -15.5 28.4 -19.8 2 5 A Q + 0 0 177 2,-0.0 0, 0.0 3,-0.0 0, 0.0 0.895 360.0 61.2 -94.7 -63.7 -11.6 28.9 -20.1 3 6 A X S S- 0 0 46 1,-0.1 2,-0.8 72,-0.1 0, 0.0 -0.249 85.6-124.2 -49.0 145.6 -10.1 26.8 -17.4 4 7 A D > - 0 0 88 1,-0.2 4,-2.2 2,-0.0 5,-0.2 -0.873 24.2-164.2 -98.5 104.0 -10.8 23.0 -17.7 5 8 A T H > S+ 0 0 32 -2,-0.8 4,-3.0 1,-0.2 5,-0.2 0.827 83.1 53.8 -69.2 -33.1 -12.3 22.3 -14.3 6 9 A E H > S+ 0 0 96 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.944 111.8 45.5 -62.3 -46.2 -12.0 18.5 -14.4 7 10 A E H > S+ 0 0 127 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.915 115.7 47.4 -57.8 -46.6 -8.2 18.8 -15.2 8 11 A V H X S+ 0 0 15 -4,-2.2 4,-2.8 2,-0.2 -2,-0.2 0.922 109.0 53.3 -68.5 -43.9 -7.8 21.4 -12.5 9 12 A R H X S+ 0 0 113 -4,-3.0 4,-2.2 1,-0.2 -1,-0.2 0.938 109.5 50.0 -56.4 -45.3 -9.8 19.3 -9.9 10 13 A E H X S+ 0 0 121 -4,-2.3 4,-1.9 1,-0.2 -1,-0.2 0.909 111.1 47.4 -62.4 -38.7 -7.5 16.4 -10.6 11 14 A F H X S+ 0 0 112 -4,-1.9 4,-3.5 2,-0.2 -1,-0.2 0.938 110.5 52.8 -69.6 -41.8 -4.4 18.5 -10.1 12 15 A V H X S+ 0 0 6 -4,-2.8 4,-2.7 1,-0.2 -2,-0.2 0.917 108.5 50.4 -57.6 -45.0 -5.7 20.0 -6.9 13 16 A G H X S+ 0 0 16 -4,-2.2 4,-2.2 2,-0.2 -1,-0.2 0.910 112.5 47.1 -57.8 -43.8 -6.4 16.6 -5.5 14 17 A H H X S+ 0 0 103 -4,-1.9 4,-3.0 2,-0.2 -2,-0.2 0.950 109.7 51.7 -69.4 -46.5 -2.9 15.6 -6.4 15 18 A L H X S+ 0 0 19 -4,-3.5 4,-2.8 1,-0.2 -2,-0.2 0.911 111.2 50.6 -50.5 -46.6 -1.4 18.8 -4.8 16 19 A E H X S+ 0 0 65 -4,-2.7 4,-2.0 2,-0.2 -2,-0.2 0.900 112.0 44.6 -58.8 -49.5 -3.3 18.0 -1.6 17 20 A R H X S+ 0 0 162 -4,-2.2 4,-2.4 2,-0.2 5,-0.2 0.911 114.2 51.8 -61.5 -42.1 -2.1 14.4 -1.4 18 21 A F H X S+ 0 0 86 -4,-3.0 4,-2.6 1,-0.2 5,-0.2 0.956 110.6 45.4 -66.4 -49.7 1.4 15.5 -2.2 19 22 A K H X S+ 0 0 26 -4,-2.8 4,-1.2 -5,-0.2 -1,-0.2 0.854 114.4 48.0 -65.1 -31.0 1.6 18.1 0.5 20 23 A E H X S+ 0 0 97 -4,-2.0 4,-1.9 -5,-0.2 -1,-0.2 0.888 113.0 50.7 -69.9 -37.0 0.0 15.9 3.2 21 24 A L H X S+ 0 0 81 -4,-2.4 4,-2.3 1,-0.2 -2,-0.2 0.912 110.1 47.6 -64.7 -46.6 2.4 13.1 2.2 22 25 A L H X S+ 0 0 40 -4,-2.6 4,-2.1 -5,-0.2 -1,-0.2 0.813 110.3 51.1 -68.0 -32.4 5.5 15.2 2.4 23 26 A R H X S+ 0 0 82 -4,-1.2 4,-1.9 -5,-0.2 -1,-0.2 0.905 113.3 45.5 -71.3 -40.0 4.7 16.7 5.7 24 27 A E H X S+ 0 0 120 -4,-1.9 4,-2.1 2,-0.2 -2,-0.2 0.895 114.4 49.1 -71.4 -30.2 4.1 13.3 7.2 25 28 A E H X S+ 0 0 111 -4,-2.3 4,-2.7 1,-0.2 -2,-0.2 0.873 112.3 46.2 -74.5 -36.6 7.2 11.9 5.6 26 29 A V H X S+ 0 0 8 -4,-2.1 4,-2.4 2,-0.2 -1,-0.2 0.832 111.7 51.4 -76.2 -33.4 9.5 14.7 6.8 27 30 A N H X S+ 0 0 71 -4,-1.9 4,-2.7 -5,-0.2 5,-0.3 0.969 111.9 49.2 -64.8 -46.7 8.0 14.6 10.3 28 31 A S H X S+ 0 0 71 -4,-2.1 4,-1.9 1,-0.2 -2,-0.2 0.928 112.7 45.7 -53.2 -54.4 8.7 10.8 10.3 29 32 A L H X S+ 0 0 87 -4,-2.7 4,-2.4 1,-0.2 -1,-0.2 0.879 115.3 47.7 -57.8 -42.9 12.3 11.3 9.1 30 33 A S H X S+ 0 0 6 -4,-2.4 4,-2.5 2,-0.2 -2,-0.2 0.868 109.6 50.8 -68.4 -37.0 12.9 14.1 11.6 31 34 A N H < S+ 0 0 112 -4,-2.7 4,-0.3 2,-0.2 -1,-0.2 0.863 112.4 48.7 -71.0 -35.1 11.5 12.2 14.6 32 35 A H H >< S+ 0 0 127 -4,-1.9 3,-1.2 -5,-0.3 4,-0.3 0.973 112.5 47.9 -66.0 -51.0 13.7 9.3 13.7 33 36 A F H >< S+ 0 0 12 -4,-2.4 3,-1.3 1,-0.3 -2,-0.2 0.876 111.4 48.4 -55.6 -48.8 16.8 11.4 13.3 34 37 A H T 3< S+ 0 0 76 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.526 106.9 60.0 -78.4 1.9 16.3 13.3 16.6 35 38 A N T < S+ 0 0 117 -3,-1.2 2,-0.8 -4,-0.3 -1,-0.3 0.408 72.4 111.1-104.7 -3.8 15.7 10.1 18.3 36 39 A L < - 0 0 58 -3,-1.3 3,-0.2 -4,-0.3 -3,-0.0 -0.636 46.6-172.3 -64.1 107.7 19.1 8.6 17.4 37 40 A E S S+ 0 0 139 -2,-0.8 -1,-0.2 1,-0.2 -3,-0.0 0.887 74.1 46.9 -75.8 -31.8 20.8 8.5 20.8 38 41 A S S S+ 0 0 117 1,-0.0 2,-0.7 2,-0.0 -1,-0.2 0.504 90.1 77.6 -93.2 -6.9 24.4 7.5 19.6 39 42 A W + 0 0 92 -3,-0.2 -3,-0.1 1,-0.1 -1,-0.0 -0.909 51.1 136.2-102.2 114.8 25.3 9.8 16.7 40 43 A R + 0 0 170 -2,-0.7 -1,-0.1 4,-0.0 2,-0.0 0.141 23.8 116.0-155.6 27.3 26.2 13.1 18.2 41 44 A D S > S- 0 0 78 1,-0.0 4,-1.2 0, 0.0 3,-0.1 -0.080 85.8 -83.8 -77.8-170.7 29.3 14.7 16.6 42 45 A A H > S+ 0 0 71 1,-0.2 4,-0.7 2,-0.2 -1,-0.0 0.490 128.1 63.3 -75.2 -8.3 29.5 17.9 14.6 43 46 A R H > S+ 0 0 189 2,-0.2 4,-1.8 3,-0.1 -1,-0.2 0.862 100.9 49.0 -77.9 -45.5 28.3 15.9 11.5 44 47 A R H > S+ 0 0 60 1,-0.2 4,-2.3 2,-0.2 -2,-0.2 0.864 112.8 51.1 -55.6 -42.3 25.0 15.0 13.2 45 48 A D H X S+ 0 0 81 -4,-1.2 4,-0.9 2,-0.2 -1,-0.2 0.786 106.7 51.8 -64.9 -33.6 24.8 18.8 13.9 46 49 A K H X S+ 0 0 158 -4,-0.7 4,-1.1 2,-0.2 -2,-0.2 0.824 115.1 42.8 -74.2 -30.1 25.6 19.6 10.3 47 50 A F H X S+ 0 0 95 -4,-1.8 4,-3.1 2,-0.2 5,-0.3 0.824 103.3 64.7 -82.5 -35.6 22.7 17.3 9.1 48 51 A S H X S+ 0 0 15 -4,-2.3 4,-1.4 1,-0.2 -1,-0.2 0.857 109.5 42.7 -52.3 -36.8 20.3 18.5 11.9 49 52 A E H X S+ 0 0 116 -4,-0.9 4,-1.6 2,-0.2 -1,-0.2 0.842 108.7 54.0 -82.2 -37.7 20.5 21.8 10.1 50 53 A V H X S+ 0 0 83 -4,-1.1 4,-0.6 2,-0.2 -2,-0.2 0.869 111.6 48.7 -61.6 -38.5 20.3 20.5 6.6 51 54 A L H >X S+ 0 0 4 -4,-3.1 4,-2.4 1,-0.2 3,-0.5 0.881 108.8 54.3 -63.3 -42.1 17.1 18.7 7.7 52 55 A D H 3X S+ 0 0 65 -4,-1.4 4,-1.6 -5,-0.3 -2,-0.2 0.791 106.5 49.4 -64.2 -27.5 15.9 22.0 9.3 53 56 A N H 3X S+ 0 0 101 -4,-1.6 4,-0.9 2,-0.2 -1,-0.2 0.618 111.2 51.5 -88.6 -16.0 16.3 23.9 6.0 54 57 A L H < S+ 0 0 143 -4,-2.0 3,-1.5 3,-0.2 -2,-0.2 0.947 109.3 51.2 -66.7 -51.6 -12.6 29.7 -6.3 75 78 A R H 3< S+ 0 0 111 -4,-3.0 -2,-0.2 2,-0.3 -1,-0.2 0.867 92.4 73.6 -51.3 -40.8 -11.9 29.8 -10.1 76 79 A I H 3< 0 0 22 -4,-2.3 -1,-0.3 -5,-0.2 -2,-0.2 0.791 360.0 360.0 -57.3 -27.8 -13.7 26.4 -10.4 77 80 A R << 0 0 209 -3,-1.5 -2,-0.3 -4,-0.7 -3,-0.2 0.439 360.0 360.0-159.8 360.0 -16.4 28.9 -9.8