==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 02-MAY-06 2GV2 . COMPND 2 MOLECULE: UBIQUITIN-PROTEIN LIGASE E3 MDM2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.SCHUBERT,K.SAKURAI . 96 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6127.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 71.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 13.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 35.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 25 A E 0 0 205 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 92.9 4.6 0.4 7.0 2 26 A T - 0 0 64 1,-0.0 24,-1.1 83,-0.0 2,-0.4 -0.606 360.0-143.5 -72.4 111.7 1.0 1.6 7.5 3 27 A L E +A 25 0A 43 -2,-0.7 83,-1.7 22,-0.2 2,-0.3 -0.657 29.9 169.5 -81.5 128.1 -0.3 1.7 3.9 4 28 A V E -AB 24 85A 0 20,-3.4 20,-2.9 -2,-0.4 81,-0.2 -0.911 32.0-143.5-138.4 162.8 -2.7 4.6 3.3 5 29 A R E - B 0 84A 108 79,-2.5 79,-1.4 -2,-0.3 18,-0.2 -0.975 26.2-132.3-130.3 115.4 -4.5 6.6 0.6 6 30 A P E - B 0 83A 13 0, 0.0 77,-0.2 0, 0.0 74,-0.1 -0.396 21.2-118.4 -68.7 142.8 -4.8 10.3 1.0 7 31 A K > - 0 0 78 75,-2.6 4,-2.8 -2,-0.1 5,-0.3 -0.241 44.3 -84.3 -70.1 168.4 -8.2 12.0 0.4 8 32 A P H > S+ 0 0 108 0, 0.0 4,-2.0 0, 0.0 5,-0.1 0.834 125.0 44.9 -42.6 -53.3 -8.5 14.5 -2.4 9 33 A L H > S+ 0 0 66 2,-0.2 4,-1.7 1,-0.2 5,-0.1 0.919 116.7 44.7 -65.3 -44.4 -7.3 17.7 -0.7 10 34 A L H > S+ 0 0 2 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.901 111.2 54.2 -66.2 -39.6 -4.3 16.0 0.9 11 35 A L H X S+ 0 0 38 -4,-2.8 4,-2.6 1,-0.2 -1,-0.2 0.898 105.6 54.4 -61.2 -38.0 -3.4 14.2 -2.3 12 36 A K H X S+ 0 0 119 -4,-2.0 4,-1.9 -5,-0.3 -1,-0.2 0.930 109.2 47.8 -59.7 -45.7 -3.4 17.6 -4.0 13 37 A L H X S+ 0 0 0 -4,-1.7 4,-0.6 2,-0.2 -2,-0.2 0.931 111.7 48.9 -61.8 -47.5 -0.9 18.9 -1.5 14 38 A L H ><>S+ 0 0 0 -4,-2.6 5,-2.0 1,-0.2 3,-1.4 0.922 111.1 50.2 -59.3 -45.5 1.4 15.9 -1.8 15 39 A K H ><5S+ 0 0 93 -4,-2.6 3,-2.0 1,-0.3 -1,-0.2 0.857 99.8 65.6 -61.2 -35.7 1.3 16.1 -5.6 16 40 A S H 3<5S+ 0 0 75 -4,-1.9 -1,-0.3 1,-0.3 -2,-0.2 0.688 106.9 42.9 -62.0 -17.7 2.2 19.8 -5.4 17 41 A V T <<5S- 0 0 33 -3,-1.4 -1,-0.3 -4,-0.6 -2,-0.2 0.067 135.8 -75.1-117.1 24.4 5.5 18.8 -3.9 18 42 A G T < 5S+ 0 0 37 -3,-2.0 -3,-0.2 1,-0.3 -2,-0.1 0.192 77.4 144.3 112.4 -20.0 6.4 15.9 -6.2 19 43 A A < + 0 0 2 -5,-2.0 -1,-0.3 -6,-0.1 -2,-0.0 -0.240 19.5 179.0 -56.7 141.8 4.3 12.9 -5.2 20 44 A Q + 0 0 163 -6,-0.0 -1,-0.1 0, 0.0 2,-0.1 0.501 51.5 73.9-122.0 -11.8 3.2 10.7 -8.1 21 45 A K - 0 0 97 1,-0.1 3,-0.1 2,-0.0 -6,-0.1 -0.320 60.1-146.3-100.4-178.6 1.1 7.9 -6.5 22 46 A D S S+ 0 0 102 1,-0.2 2,-0.4 -2,-0.1 -1,-0.1 0.468 88.1 56.7-120.9 -14.7 -2.3 7.4 -4.9 23 47 A T + 0 0 29 -18,-0.2 2,-0.3 -20,-0.0 -1,-0.2 -0.987 68.8 163.2-124.1 127.7 -1.2 4.8 -2.3 24 48 A Y E -A 4 0A 2 -20,-2.9 -20,-3.4 -2,-0.4 2,-0.3 -0.824 38.3-110.5-136.5 173.2 1.6 5.6 0.2 25 49 A T E > -A 3 0A 20 -2,-0.3 4,-1.9 -22,-0.2 3,-0.5 -0.676 41.0-110.7 -97.6 159.4 3.2 4.5 3.5 26 50 A M H > S+ 0 0 15 -24,-1.1 4,-2.6 -2,-0.3 5,-0.2 0.870 120.1 59.5 -59.6 -34.5 2.8 6.9 6.4 27 51 A K H > S+ 0 0 176 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.878 105.0 47.9 -60.6 -39.7 6.5 7.6 6.1 28 52 A E H > S+ 0 0 62 -3,-0.5 4,-2.4 2,-0.2 5,-0.2 0.905 110.4 51.3 -68.2 -42.1 6.0 8.9 2.6 29 53 A V H X S+ 0 0 0 -4,-1.9 4,-2.4 1,-0.2 -2,-0.2 0.926 111.7 47.4 -60.8 -45.3 3.1 11.0 3.6 30 54 A L H X S+ 0 0 18 -4,-2.6 4,-2.6 2,-0.2 -1,-0.2 0.896 109.5 54.6 -63.1 -40.4 5.1 12.6 6.4 31 55 A F H X S+ 0 0 111 -4,-2.0 4,-2.2 -5,-0.2 -2,-0.2 0.956 111.9 42.5 -58.7 -50.5 8.1 13.2 4.0 32 56 A Y H X S+ 0 0 46 -4,-2.4 4,-2.1 2,-0.2 -1,-0.2 0.890 112.2 53.4 -65.0 -39.2 5.9 15.1 1.5 33 57 A L H X S+ 0 0 1 -4,-2.4 4,-2.3 1,-0.2 -1,-0.2 0.930 109.6 50.2 -60.8 -42.9 4.1 17.1 4.2 34 58 A G H X S+ 0 0 0 -4,-2.6 4,-2.3 1,-0.2 -2,-0.2 0.917 109.8 49.6 -61.4 -42.7 7.5 18.1 5.6 35 59 A Q H X S+ 0 0 51 -4,-2.2 4,-2.9 2,-0.2 -1,-0.2 0.834 108.2 54.2 -65.8 -31.8 8.6 19.2 2.1 36 60 A Y H X S+ 0 0 14 -4,-2.1 4,-2.6 2,-0.2 5,-0.2 0.953 109.0 47.5 -65.5 -49.9 5.4 21.2 1.7 37 61 A I H X>S+ 0 0 0 -4,-2.3 5,-2.2 1,-0.2 4,-0.6 0.903 116.1 45.3 -58.2 -42.3 6.1 23.1 5.0 38 62 A M H ><5S+ 0 0 50 -4,-2.3 3,-0.6 3,-0.2 -2,-0.2 0.941 112.6 48.8 -67.9 -48.0 9.7 23.7 3.9 39 63 A T H 3<5S+ 0 0 99 -4,-2.9 -2,-0.2 1,-0.3 -1,-0.2 0.889 117.1 42.3 -58.8 -41.3 8.9 24.8 0.4 40 64 A K H 3<5S- 0 0 100 -4,-2.6 -1,-0.3 -5,-0.2 -2,-0.2 0.562 105.3-132.0 -82.7 -9.2 6.2 27.2 1.6 41 65 A R T <<5 + 0 0 181 -4,-0.6 -3,-0.2 -3,-0.6 -4,-0.1 0.939 51.6 152.9 56.8 50.2 8.5 28.3 4.5 42 66 A L < + 0 0 22 -5,-2.2 10,-3.1 -6,-0.1 2,-0.1 0.560 38.4 95.6 -86.9 -9.5 5.6 27.9 7.0 43 67 A Y B S-C 51 0B 32 -6,-0.5 8,-0.2 8,-0.2 2,-0.2 -0.455 84.6-100.4 -83.7 156.1 7.9 27.3 10.0 44 68 A D - 0 0 31 6,-2.4 6,-0.2 3,-0.6 -1,-0.1 -0.525 25.1-137.8 -72.7 139.2 9.0 29.9 12.5 45 69 A E S S+ 0 0 166 -2,-0.2 3,-0.3 1,-0.1 -1,-0.1 0.901 99.4 35.2 -65.1 -43.6 12.6 31.2 11.8 46 70 A K S S+ 0 0 192 1,-0.3 2,-0.6 2,-0.0 -1,-0.1 0.906 130.6 28.9 -78.6 -46.6 13.7 31.2 15.4 47 71 A Q S > S- 0 0 105 1,-0.1 3,-2.2 3,-0.1 -3,-0.6 -0.841 74.3-171.0-117.1 87.2 11.8 28.1 16.8 48 72 A Q T 3 S+ 0 0 62 -2,-0.6 -1,-0.1 -3,-0.3 -3,-0.1 0.419 75.6 72.5 -65.2 2.4 11.5 25.9 13.7 49 73 A H T 3 S+ 0 0 21 -6,-0.1 20,-2.9 44,-0.1 2,-0.5 0.577 80.4 92.6 -89.3 -9.4 9.2 23.4 15.3 50 74 A I E < - D 0 68B 33 -3,-2.2 -6,-2.4 18,-0.2 2,-0.5 -0.713 61.3-165.7 -87.8 128.2 6.5 26.1 15.1 51 75 A V E -CD 43 67B 0 16,-3.3 16,-1.9 -2,-0.5 2,-0.6 -0.956 9.0-158.3-119.9 129.6 4.3 25.9 11.9 52 76 A Y E + D 0 66B 107 -10,-3.1 14,-0.2 -2,-0.5 7,-0.1 -0.915 24.1 156.9-106.0 118.3 2.0 28.7 10.8 53 77 A C > + 0 0 0 12,-1.8 3,-1.6 -2,-0.6 6,-0.6 0.231 20.9 133.7-127.5 16.8 -0.8 27.5 8.4 54 78 A S T 3 S+ 0 0 78 11,-1.2 3,-0.1 1,-0.3 4,-0.1 -0.432 82.2 13.3 -67.4 140.5 -3.5 30.1 8.7 55 79 A N T 3 S+ 0 0 171 1,-0.2 2,-0.3 -2,-0.1 -1,-0.3 0.709 111.8 109.2 66.1 19.1 -4.8 31.1 5.2 56 80 A D S X> S- 0 0 19 -3,-1.6 4,-1.5 1,-0.1 3,-1.0 -0.910 82.7-115.4-126.1 155.0 -3.0 28.1 3.8 57 81 A L H 3> S+ 0 0 42 -2,-0.3 4,-2.1 1,-0.3 3,-0.3 0.893 117.8 56.8 -52.0 -43.3 -4.1 24.8 2.3 58 82 A L H 3> S+ 0 0 0 1,-0.2 4,-2.5 2,-0.2 -1,-0.3 0.838 103.3 55.2 -59.3 -32.3 -2.4 23.0 5.2 59 83 A G H <>>S+ 0 0 8 -3,-1.0 4,-2.0 -6,-0.6 5,-0.5 0.872 107.1 48.5 -68.8 -36.8 -4.5 25.0 7.5 60 84 A D H <5S+ 0 0 126 -4,-1.5 -2,-0.2 -3,-0.3 -1,-0.2 0.875 114.4 47.3 -69.3 -37.0 -7.7 23.9 5.8 61 85 A L H <5S+ 0 0 10 -4,-2.1 -2,-0.2 -5,-0.2 -1,-0.2 0.902 120.7 34.9 -70.3 -44.8 -6.5 20.2 6.0 62 86 A F H <5S- 0 0 15 -4,-2.5 -2,-0.2 2,-0.2 -1,-0.2 0.708 97.7-134.0 -85.1 -22.7 -5.4 20.3 9.6 63 87 A G T <5S+ 0 0 66 -4,-2.0 -3,-0.2 1,-0.3 -4,-0.1 0.709 70.1 98.7 77.0 20.1 -8.1 22.6 10.9 64 88 A V < - 0 0 27 -5,-0.5 -1,-0.3 -6,-0.2 -2,-0.2 -0.949 69.5-137.8-136.4 155.3 -5.8 24.8 13.0 65 89 A P S S- 0 0 86 0, 0.0 -12,-1.8 0, 0.0 -11,-1.2 0.654 88.1 -5.4 -86.4 -15.9 -4.1 28.2 12.4 66 90 A S E +D 52 0B 56 -14,-0.2 2,-0.3 -13,-0.2 -14,-0.2 -0.978 62.6 175.6-167.0 163.7 -0.8 26.9 13.8 67 91 A F E -D 51 0B 7 -16,-1.9 -16,-3.3 -2,-0.3 2,-0.4 -0.978 26.7-114.9-168.4 164.7 0.9 24.0 15.6 68 92 A S E > -D 50 0B 18 -2,-0.3 3,-2.5 -18,-0.2 -18,-0.2 -0.907 18.8-133.0-113.0 141.0 4.2 22.7 16.9 69 93 A V T 3 S+ 0 0 2 -20,-2.9 -19,-0.1 -2,-0.4 -1,-0.1 0.751 106.9 72.8 -60.1 -20.0 6.0 19.6 15.6 70 94 A K T 3 S+ 0 0 136 -21,-0.2 2,-1.9 1,-0.2 -1,-0.3 0.716 75.5 83.7 -66.3 -20.8 6.3 18.8 19.3 71 95 A E <> + 0 0 71 -3,-2.5 4,-2.4 1,-0.2 -1,-0.2 -0.472 58.0 164.8 -83.8 68.3 2.6 17.9 19.2 72 96 A H H > + 0 0 72 -2,-1.9 4,-2.5 1,-0.2 5,-0.2 0.914 69.2 43.4 -52.8 -57.0 3.1 14.4 17.9 73 97 A R H > S+ 0 0 212 1,-0.2 4,-2.6 -3,-0.2 -1,-0.2 0.907 114.1 51.8 -60.3 -41.4 -0.3 12.8 18.6 74 98 A K H > S+ 0 0 86 2,-0.2 4,-3.0 1,-0.2 -1,-0.2 0.914 110.1 49.5 -61.6 -42.7 -2.2 15.9 17.4 75 99 A I H X S+ 0 0 0 -4,-2.4 4,-2.4 2,-0.2 -2,-0.2 0.947 112.0 46.3 -63.2 -48.2 -0.2 15.8 14.1 76 100 A Y H X S+ 0 0 58 -4,-2.5 4,-3.0 1,-0.2 -1,-0.2 0.903 114.2 50.4 -60.9 -37.4 -0.9 12.1 13.5 77 101 A T H X S+ 0 0 83 -4,-2.6 4,-1.4 -5,-0.2 -2,-0.2 0.928 111.1 47.2 -65.2 -44.9 -4.5 12.8 14.3 78 102 A M H < S+ 0 0 15 -4,-3.0 4,-0.4 1,-0.2 -1,-0.2 0.844 115.5 47.3 -66.2 -32.4 -4.7 15.8 11.9 79 103 A I H >< S+ 0 0 1 -4,-2.4 3,-1.9 -5,-0.2 -2,-0.2 0.936 108.4 51.6 -74.5 -47.7 -3.0 13.6 9.2 80 104 A Y H >< S+ 0 0 89 -4,-3.0 3,-1.8 1,-0.3 -2,-0.2 0.788 97.5 69.3 -60.9 -26.1 -5.2 10.5 9.7 81 105 A R T 3< S+ 0 0 170 -4,-1.4 -1,-0.3 1,-0.3 -2,-0.2 0.790 103.6 44.7 -60.8 -26.6 -8.3 12.8 9.3 82 106 A N T < S+ 0 0 19 -3,-1.9 -75,-2.6 -4,-0.4 2,-0.3 0.114 110.8 64.7-105.7 21.3 -7.2 13.2 5.7 83 107 A L E < -B 6 0A 9 -3,-1.8 2,-0.4 -77,-0.2 -79,-0.0 -0.915 61.5-145.1-139.6 163.2 -6.4 9.5 5.0 84 108 A V E -B 5 0A 72 -79,-1.4 -79,-2.5 -2,-0.3 2,-0.6 -0.985 26.0-128.1-127.0 138.0 -8.0 6.1 4.7 85 109 A V E -B 4 0A 86 -2,-0.4 -81,-0.2 -81,-0.2 -83,-0.0 -0.795 30.2-118.1 -89.1 124.0 -6.0 3.0 5.8 86 110 A V - 0 0 13 -83,-1.7 -83,-0.2 -2,-0.6 -1,-0.0 -0.288 8.7-132.9 -62.8 143.3 -6.0 0.3 3.1 87 111 A N 0 0 176 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.819 360.0 360.0 -65.0 -31.1 -7.6 -3.0 3.9 88 112 A Q 0 0 181 -85,-0.0 -85,-0.1 0, 0.0 0, 0.0 0.086 360.0 360.0 -45.8 360.0 -4.6 -4.7 2.5 89 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 90 2 B F > 0 0 12 0, 0.0 4,-3.1 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -54.1 12.7 22.2 10.9 91 3 B M H > + 0 0 85 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.893 360.0 55.1 -51.9 -44.0 13.8 18.9 9.3 92 4 B X H > S+ 0 0 85 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.919 113.4 41.0 -56.2 -47.9 15.6 17.8 12.5 93 5 B X H >4 S+ 0 0 182 -3,-0.2 3,-1.2 1,-0.2 4,-0.3 0.929 113.3 54.0 -65.9 -46.7 12.3 18.3 14.4 94 6 B X H >< S+ 0 0 17 -4,-3.1 3,-1.7 1,-0.3 -2,-0.2 0.826 98.7 62.5 -58.6 -34.7 10.2 16.8 11.7 95 7 B E H 3< S+ 0 0 155 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.810 89.9 71.3 -61.9 -28.8 12.3 13.6 11.7 96 8 B X T << 0 0 76 -3,-1.2 -1,-0.3 -4,-0.7 -2,-0.2 0.669 360.0 360.0 -62.5 -17.7 11.2 13.1 15.3 97 9 B L < 0 0 43 -3,-1.7 -27,-0.0 -4,-0.3 -28,-0.0 -0.407 360.0 360.0 -69.4 360.0 7.7 12.2 14.1