==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HIGH DENSITY LIPOPROTEINS 04-JUN-97 1GW3 . COMPND 2 MOLECULE: APOA-I; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.WANG,J.T.SPARROW,R.J.CUSHLEY . 46 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5246.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 26 56.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 39.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 157 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 81.6 29.5 -5.5 -7.4 2 2 A P - 0 0 130 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.199 360.0-134.9 -48.1 166.2 27.6 -5.5 -4.1 3 3 A L - 0 0 121 1,-0.2 0, 0.0 3,-0.0 0, 0.0 -0.460 10.6-160.6-113.3-171.9 26.1 -2.5 -2.3 4 4 A G - 0 0 66 -2,-0.2 -1,-0.2 0, 0.0 0, 0.0 0.350 57.4 -56.7-131.8 -81.2 26.0 -1.1 1.2 5 5 A E S S+ 0 0 165 3,-0.0 -2,-0.0 4,-0.0 0, 0.0 -0.206 105.2 70.9-178.2 70.9 23.3 1.4 2.2 6 6 A E S > S+ 0 0 169 3,-0.0 4,-0.5 0, 0.0 -3,-0.0 0.319 92.1 52.1-156.1 -42.2 23.0 4.6 0.2 7 7 A M T 4 S+ 0 0 129 1,-0.2 4,-0.1 2,-0.1 3,-0.0 0.872 126.9 27.2 -63.7 -39.9 21.6 3.7 -3.2 8 8 A R T >> S+ 0 0 150 1,-0.1 4,-1.0 2,-0.1 3,-0.8 0.540 101.9 80.2-105.2 -12.4 18.8 1.9 -1.6 9 9 A D T 34 S+ 0 0 86 1,-0.3 5,-0.1 2,-0.2 -1,-0.1 0.781 83.0 67.4 -68.0 -27.7 18.5 3.7 1.7 10 10 A R T >X S+ 0 0 205 -4,-0.5 4,-1.1 1,-0.2 3,-0.7 0.836 102.7 47.1 -58.1 -31.0 16.6 6.4 -0.0 11 11 A A T <4 S+ 0 0 29 -3,-0.8 4,-0.5 1,-0.2 -1,-0.2 0.768 109.6 54.0 -77.2 -29.1 14.0 3.7 -0.4 12 12 A R T 3< S+ 0 0 145 -4,-1.0 -1,-0.2 1,-0.1 -2,-0.2 -0.124 107.5 52.9 -95.4 36.6 14.4 2.9 3.3 13 13 A A T <> S+ 0 0 56 -3,-0.7 4,-0.5 -5,-0.1 -2,-0.2 0.528 109.9 38.7-133.5 -41.8 13.8 6.5 4.3 14 14 A H H X S+ 0 0 118 -4,-1.1 4,-0.7 2,-0.2 -2,-0.1 0.490 110.3 63.0 -90.3 -4.9 10.5 7.5 2.7 15 15 A V H > S+ 0 0 40 -4,-0.5 4,-1.6 2,-0.2 -1,-0.2 0.799 97.5 54.7 -85.9 -32.9 9.0 4.1 3.4 16 16 A D H > S+ 0 0 122 1,-0.2 4,-0.8 2,-0.2 -2,-0.2 0.830 111.8 44.8 -69.3 -32.2 9.2 4.5 7.1 17 17 A A H X S+ 0 0 53 -4,-0.5 4,-1.7 2,-0.2 -1,-0.2 0.780 105.4 63.7 -78.9 -31.1 7.3 7.7 6.9 18 18 A L H X S+ 0 0 95 -4,-0.7 4,-1.4 1,-0.2 -2,-0.2 0.922 97.4 56.7 -51.6 -47.4 4.9 6.0 4.5 19 19 A R H < S+ 0 0 183 -4,-1.6 3,-0.3 1,-0.2 -1,-0.2 0.899 108.1 45.1 -60.2 -43.5 3.8 3.6 7.3 20 20 A T H >< S+ 0 0 120 -4,-0.8 3,-0.9 1,-0.2 -1,-0.2 0.873 105.7 62.1 -66.6 -36.9 2.8 6.4 9.7 21 21 A H H 3< S+ 0 0 133 -4,-1.7 -1,-0.2 1,-0.3 -2,-0.2 0.844 125.7 11.9 -62.4 -34.9 0.9 8.3 6.9 22 22 A L T 3< S+ 0 0 92 -4,-1.4 -1,-0.3 -3,-0.3 -2,-0.2 -0.280 84.6 121.3-143.4 51.9 -1.5 5.5 6.4 23 23 A A S < S+ 0 0 62 -3,-0.9 -3,-0.1 1,-0.1 -2,-0.1 0.970 90.4 29.4 -71.3 -62.5 -1.1 3.0 9.2 24 24 A P S > S+ 0 0 92 0, 0.0 2,-1.5 0, 0.0 4,-0.6 0.608 104.2 83.2 -73.7 -16.5 -4.8 3.2 10.4 25 25 A Y T 4 S+ 0 0 143 1,-0.2 -4,-0.0 2,-0.1 0, 0.0 -0.560 75.8 72.4 -89.1 71.6 -6.1 4.0 6.9 26 26 A S T > S+ 0 0 42 -2,-1.5 4,-1.0 3,-0.0 -1,-0.2 0.419 93.1 40.5-144.7 -49.3 -6.3 0.5 5.7 27 27 A D H > S+ 0 0 137 -3,-0.4 4,-1.2 2,-0.2 -2,-0.1 0.848 112.1 56.3 -77.9 -36.6 -9.2 -1.4 7.3 28 28 A E H >X S+ 0 0 136 -4,-0.6 4,-0.6 1,-0.2 3,-0.5 0.970 111.6 38.4 -61.8 -57.2 -11.7 1.4 7.1 29 29 A L H >> S+ 0 0 73 1,-0.2 4,-1.2 2,-0.2 3,-0.9 0.866 110.5 60.8 -65.8 -37.0 -11.6 2.2 3.4 30 30 A R H 3X S+ 0 0 156 -4,-1.0 4,-0.6 1,-0.3 -1,-0.2 0.831 93.3 64.7 -61.4 -34.0 -11.4 -1.5 2.5 31 31 A Q H < S+ 0 0 70 -4,-0.6 3,-0.8 -3,-0.2 -2,-0.1 0.709 112.6 60.3-103.8 -28.9 -18.6 -5.8 -0.5 36 36 A R G >X S+ 0 0 180 -4,-0.7 4,-1.3 1,-0.2 3,-0.6 0.860 98.6 60.9 -65.0 -35.3 -19.2 -3.8 -3.6 37 37 A L G 34 S+ 0 0 79 -4,-0.4 6,-0.3 1,-0.2 -1,-0.2 -0.076 91.0 67.2 -94.3 37.4 -16.7 -5.8 -5.6 38 38 A E G <4 S+ 0 0 158 -3,-0.8 -1,-0.2 -2,-0.3 -2,-0.1 -0.098 112.1 22.3-137.7 35.9 -18.4 -9.1 -5.3 39 39 A A T <4 S+ 0 0 55 -3,-0.6 -2,-0.2 0, 0.0 -3,-0.1 0.257 111.0 58.3-162.2 -53.4 -21.5 -8.4 -7.3 40 40 A L S < S+ 0 0 163 -4,-1.3 -3,-0.1 1,-0.2 -4,-0.0 0.987 122.8 15.5 -63.5 -64.6 -21.1 -5.6 -9.8 41 41 A K S S- 0 0 128 -5,-0.3 -1,-0.2 0, 0.0 -4,-0.1 0.701 95.1-141.2 -91.2 -23.3 -18.2 -6.7 -12.0 42 42 A E - 0 0 113 1,-0.1 -4,-0.1 3,-0.0 -5,-0.0 0.982 12.7-159.7 64.1 80.6 -18.2 -10.3 -10.9 43 43 A N S S+ 0 0 149 -6,-0.3 -1,-0.1 2,-0.0 -5,-0.1 0.924 85.2 9.0 -51.6 -48.1 -14.7 -11.6 -10.6 44 44 A G S S+ 0 0 61 2,-0.0 2,-0.2 0, 0.0 -6,-0.0 0.471 80.5 135.2-100.7-118.1 -16.0 -15.1 -10.8 45 45 A G 0 0 67 1,-0.1 -3,-0.0 0, 0.0 -2,-0.0 -0.495 360.0 360.0 98.3-165.8 -19.6 -16.1 -11.8 46 46 A A 0 0 181 -2,-0.2 -1,-0.1 0, 0.0 -2,-0.0 -0.757 360.0 360.0-101.8 360.0 -20.9 -18.7 -14.2