==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HIGH DENSITY LIPOPROTEINS 04-JUN-97 1GW4 . COMPND 2 MOLECULE: APOA-I; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.WANG,J.T.SPARROW,R.J.CUSHLEY . 46 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5560.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 26 56.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 19.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 32.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 155 0, 0.0 3,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 48.0 -6.6 -16.9 6.4 2 2 A P - 0 0 125 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.884 360.0 -24.5 -59.8 -42.1 -6.4 -20.3 4.4 3 3 A L S S+ 0 0 163 1,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.352 82.2 141.4-174.5 95.6 -9.5 -19.1 2.5 4 4 A G + 0 0 55 -3,-0.2 4,-0.3 1,-0.1 3,-0.2 -0.778 4.8 156.3-136.6 94.6 -11.9 -16.5 3.9 5 5 A E + 0 0 168 -2,-0.3 4,-0.2 1,-0.2 -1,-0.1 -0.101 57.0 83.4-110.8 35.6 -13.2 -14.1 1.4 6 6 A E S > S+ 0 0 172 2,-0.1 4,-0.9 3,-0.1 3,-0.4 0.778 88.2 49.1 -96.8 -41.4 -16.4 -13.1 3.1 7 7 A M H > S+ 0 0 131 1,-0.2 4,-1.5 2,-0.2 3,-0.3 0.832 99.2 67.4 -70.6 -33.7 -15.1 -10.5 5.5 8 8 A R H 4 S+ 0 0 164 -4,-0.3 -1,-0.2 1,-0.3 -2,-0.1 0.875 98.8 52.0 -54.9 -40.0 -13.2 -8.7 2.8 9 9 A D H >4 S+ 0 0 127 -3,-0.4 3,-1.4 1,-0.2 4,-0.4 0.860 101.9 60.6 -67.3 -37.0 -16.5 -7.6 1.2 10 10 A R H 3< S+ 0 0 203 -4,-0.9 3,-0.3 1,-0.3 4,-0.2 0.924 114.9 34.2 -51.1 -44.9 -17.7 -6.3 4.5 11 11 A A T 3< S+ 0 0 51 -4,-1.5 4,-0.5 1,-0.2 -1,-0.3 -0.051 88.8 103.9-107.4 30.6 -14.8 -3.8 4.6 12 12 A R S < S+ 0 0 173 -3,-1.4 4,-0.4 2,-0.2 -1,-0.2 0.869 86.8 39.2 -82.6 -39.2 -14.7 -3.2 0.9 13 13 A A S >> S+ 0 0 72 -4,-0.4 4,-1.4 -3,-0.3 3,-0.7 0.733 106.5 66.4 -80.4 -26.3 -16.3 0.2 0.9 14 14 A H H 3> S+ 0 0 122 1,-0.2 4,-1.3 -4,-0.2 -1,-0.2 0.766 91.0 64.5 -63.9 -25.0 -14.5 1.1 4.1 15 15 A V H 3> S+ 0 0 78 -4,-0.5 4,-1.4 2,-0.2 -1,-0.2 0.813 98.0 55.1 -67.1 -29.4 -11.3 1.0 2.0 16 16 A D H X> S+ 0 0 94 -3,-0.7 4,-1.4 -4,-0.4 3,-0.6 0.957 105.1 50.8 -63.1 -54.1 -12.8 3.9 0.2 17 17 A A H 3X S+ 0 0 56 -4,-1.4 4,-0.6 1,-0.2 -2,-0.2 0.840 107.5 57.7 -45.6 -35.7 -13.2 5.8 3.5 18 18 A L H >X S+ 0 0 102 -4,-1.3 4,-1.2 1,-0.2 3,-0.6 0.854 99.9 53.8 -73.6 -36.6 -9.5 4.9 4.0 19 19 A R H << S+ 0 0 163 -4,-1.4 -1,-0.2 -3,-0.6 -2,-0.2 0.865 96.6 67.2 -65.5 -35.2 -8.2 6.6 0.9 20 20 A T H >< S+ 0 0 104 -4,-1.4 3,-0.6 1,-0.2 -1,-0.2 0.812 101.7 48.8 -58.7 -31.3 -9.8 9.9 1.8 21 21 A H H << S+ 0 0 152 -4,-0.6 -1,-0.2 -3,-0.6 -2,-0.2 0.928 114.7 42.2 -71.6 -48.4 -7.5 10.2 4.7 22 22 A L T >X S+ 0 0 78 -4,-1.2 3,-1.0 1,-0.2 4,-0.5 -0.027 76.5 117.0 -95.9 31.7 -4.3 9.4 2.8 23 23 A A G X4 S+ 0 0 64 -3,-0.6 3,-0.8 1,-0.2 -1,-0.2 0.975 82.5 40.5 -53.0 -57.4 -5.2 11.5 -0.2 24 24 A P G 34 S+ 0 0 100 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.066 103.9 72.2 -84.1 23.7 -2.1 13.8 0.4 25 25 A Y G X> + 0 0 137 -3,-1.0 4,-0.7 3,-0.1 3,-0.6 0.621 69.5 85.2-112.5 -22.5 0.3 11.0 1.3 26 26 A S T << S+ 0 0 68 -3,-0.8 2,-1.3 -4,-0.5 3,-0.4 0.935 92.5 42.1 -51.0 -59.4 0.9 9.3 -2.0 27 27 A D T 34 S+ 0 0 152 1,-0.2 -1,-0.3 3,-0.1 3,-0.1 -0.508 99.7 69.6 -98.2 69.1 3.7 11.5 -3.3 28 28 A E T <4 S+ 0 0 147 -2,-1.3 2,-0.6 -3,-0.6 -1,-0.2 0.413 95.6 42.4-142.3 -44.3 5.9 12.1 -0.2 29 29 A L S < S+ 0 0 85 -4,-0.7 -1,-0.3 -3,-0.4 -4,-0.0 -0.945 83.2 82.2-111.2 113.4 7.5 8.7 0.6 30 30 A R S S+ 0 0 174 -2,-0.6 4,-0.5 -3,-0.1 -1,-0.1 0.147 81.7 58.8-172.6 -39.1 8.8 6.8 -2.4 31 31 A Q S S+ 0 0 179 2,-0.2 -2,-0.1 1,-0.2 0, 0.0 0.766 105.0 56.9 -70.3 -29.0 12.2 8.2 -3.3 32 32 A R S >> S+ 0 0 221 1,-0.2 3,-0.7 -4,-0.2 4,-0.6 0.848 107.7 46.9 -66.5 -35.4 13.1 7.2 0.2 33 33 A L H 3> S+ 0 0 94 1,-0.2 4,-1.5 2,-0.2 -2,-0.2 0.627 99.0 72.5 -76.0 -16.4 12.1 3.7 -0.8 34 34 A A H 34 S+ 0 0 40 -4,-0.5 -1,-0.2 1,-0.2 -2,-0.2 0.169 90.6 59.3 -85.5 17.8 14.1 4.2 -4.0 35 35 A A H <> S+ 0 0 61 -3,-0.7 4,-0.9 2,-0.1 -1,-0.2 0.730 108.8 37.2-108.6 -46.9 17.4 3.8 -2.0 36 36 A R H X S+ 0 0 208 -4,-0.6 4,-1.4 1,-0.2 3,-0.5 0.881 111.7 61.4 -69.2 -40.5 17.0 0.4 -0.5 37 37 A L H X S+ 0 0 97 -4,-1.5 4,-1.3 1,-0.2 5,-0.3 0.756 98.2 61.2 -53.5 -24.6 15.3 -0.7 -3.7 38 38 A E H 4 S+ 0 0 86 1,-0.2 -1,-0.2 2,-0.2 -2,-0.2 0.918 98.2 53.8 -67.8 -46.2 18.7 0.2 -5.2 39 39 A A H < S+ 0 0 80 -4,-0.9 -2,-0.2 -3,-0.5 -1,-0.2 0.862 107.1 53.6 -54.7 -37.7 20.5 -2.3 -3.1 40 40 A L H < S+ 0 0 156 -4,-1.4 -1,-0.2 2,-0.1 -2,-0.2 0.902 124.6 12.7 -69.3 -43.4 18.2 -5.1 -4.3 41 41 A K S < S- 0 0 180 -4,-1.3 2,-0.2 1,-0.3 -3,-0.1 0.829 98.0 -96.7-101.4 -87.8 18.6 -4.5 -8.0 42 42 A E + 0 0 133 -5,-0.3 -1,-0.3 1,-0.2 -2,-0.1 -0.805 63.3 113.5-171.1-155.7 21.4 -2.4 -9.4 43 43 A N + 0 0 109 -2,-0.2 -1,-0.2 -4,-0.1 -2,-0.1 0.967 64.4 79.9 63.3 89.9 22.2 1.1 -10.7 44 44 A G S S- 0 0 54 -5,-0.0 -1,-0.0 0, 0.0 -6,-0.0 0.355 114.4 -22.2 140.8 63.8 24.6 2.8 -8.3 45 45 A G 0 0 79 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.831 360.0 360.0 88.0 36.6 28.2 1.8 -8.7 46 46 A A 0 0 148 0, 0.0 -1,-0.1 0, 0.0 -4,-0.0 0.998 360.0 360.0 53.4 360.0 27.7 -1.5 -10.4