==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTIONAL ACTIVATOR 08-APR-02 1GXQ . COMPND 2 MOLECULE: PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.G.BLANCO,M.SOLA,F.X.GOMIS-RUTH,M.COLL . 105 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6770.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 75 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 19.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 28.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 125 A P 0 0 134 0, 0.0 2,-2.5 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 93.0 -6.0 9.4 2.8 2 126 A M + 0 0 195 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.393 360.0 77.3 -78.2 68.6 -9.1 7.9 1.1 3 127 A A > - 0 0 54 -2,-2.5 3,-0.5 1,-0.1 0, 0.0 -0.806 69.7-141.7-173.2 128.2 -7.2 6.3 -1.8 4 128 A V T 3 S+ 0 0 123 -2,-0.2 -1,-0.1 1,-0.2 -2,-0.0 0.963 102.6 29.7 -62.9 -59.3 -5.2 3.1 -1.8 5 129 A E T 3 S+ 0 0 119 12,-0.1 13,-0.5 11,-0.1 -1,-0.2 0.227 93.9 137.1 -87.3 15.8 -2.2 4.0 -4.0 6 130 A E < - 0 0 80 -3,-0.5 2,-0.3 -5,-0.1 -3,-0.1 -0.260 65.6 -94.2 -63.0 148.5 -2.4 7.7 -2.9 7 131 A V - 0 0 66 9,-0.1 2,-0.3 10,-0.1 9,-0.2 -0.465 36.0-141.8 -68.7 127.1 0.7 9.6 -2.1 8 132 A I E -A 15 0A 26 7,-2.2 7,-2.7 -2,-0.3 2,-0.4 -0.726 22.4-173.9 -89.4 137.6 1.6 9.5 1.6 9 133 A E E +A 14 0A 114 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.997 13.5 164.6-139.3 141.5 3.0 12.7 3.0 10 134 A M E > S-A 13 0A 28 3,-2.6 3,-2.5 -2,-0.4 -2,-0.0 -0.875 70.9 -19.2-158.5 120.8 4.5 13.7 6.4 11 135 A Q T 3 S- 0 0 111 1,-0.3 3,-0.1 -2,-0.3 -2,-0.0 0.827 129.3 -46.2 52.3 37.3 6.6 16.7 7.5 12 136 A G T 3 S+ 0 0 28 1,-0.3 13,-3.2 12,-0.1 2,-0.6 0.290 115.3 117.2 90.8 -11.7 7.6 17.5 3.9 13 137 A L E < -AB 10 24A 0 -3,-2.5 -3,-2.6 11,-0.2 2,-0.4 -0.811 42.6-175.7 -94.3 123.5 8.4 13.8 3.2 14 138 A S E -AB 9 23A 26 9,-2.4 9,-2.3 -2,-0.6 2,-0.4 -0.920 11.5-164.9-120.8 147.8 6.2 12.2 0.5 15 139 A L E -AB 8 22A 0 -7,-2.7 -7,-2.2 -2,-0.4 7,-0.2 -0.982 7.4-155.2-134.5 120.4 6.2 8.6 -0.8 16 140 A D E >> - B 0 21A 34 5,-2.9 4,-2.8 -2,-0.4 5,-0.6 -0.839 2.5-166.3-100.1 104.9 4.5 7.6 -4.0 17 141 A P T 45S+ 0 0 25 0, 0.0 -1,-0.1 0, 0.0 -11,-0.1 0.767 88.1 51.0 -58.6 -28.8 3.4 3.9 -4.0 18 142 A T T 45S+ 0 0 104 -13,-0.5 -12,-0.1 1,-0.1 -2,-0.0 0.937 126.3 20.1 -77.0 -49.6 2.8 4.0 -7.7 19 143 A S T 45S- 0 0 52 2,-0.1 -1,-0.1 0, 0.0 3,-0.1 0.591 96.1-128.9 -96.4 -11.8 6.1 5.5 -8.9 20 144 A H T <5 + 0 0 117 -4,-2.8 2,-0.5 1,-0.3 16,-0.0 0.811 54.3 155.3 63.9 32.5 8.1 4.6 -5.8 21 145 A R E < -B 16 0A 143 -5,-0.6 -5,-2.9 9,-0.0 2,-0.4 -0.789 24.4-169.3 -94.0 129.2 9.2 8.3 -5.7 22 146 A V E -B 15 0A 4 -2,-0.5 7,-2.5 7,-0.5 2,-0.4 -0.975 10.8-177.9-119.2 133.1 10.3 9.6 -2.3 23 147 A M E -BC 14 28A 43 -9,-2.3 -9,-2.4 -2,-0.4 2,-1.0 -0.989 35.1-146.3-140.5 145.7 10.8 13.3 -1.8 24 148 A A E > S-BC 13 27A 16 3,-2.5 3,-1.9 -2,-0.4 2,-0.8 -0.869 89.4 -51.4-102.2 92.6 11.9 15.9 0.8 25 149 A G T 3 S- 0 0 48 -13,-3.2 -11,-0.1 -2,-1.0 -13,-0.1 -0.646 123.2 -23.7 75.6-110.5 9.6 18.6 -0.5 26 150 A E T 3 S+ 0 0 179 -2,-0.8 -1,-0.3 2,-0.1 -14,-0.0 0.408 115.5 100.7-113.6 -1.5 10.5 18.7 -4.2 27 151 A E E < S-C 24 0A 133 -3,-1.9 -3,-2.5 1,-0.0 2,-0.1 -0.746 71.7-129.2 -87.9 127.0 14.0 17.1 -3.9 28 152 A P E -C 23 0A 78 0, 0.0 2,-0.3 0, 0.0 -5,-0.2 -0.448 19.4-146.4 -75.5 148.7 14.1 13.4 -4.9 29 153 A L - 0 0 14 -7,-2.5 2,-0.5 -2,-0.1 -7,-0.5 -0.873 5.5-133.8-117.0 150.7 15.7 10.9 -2.5 30 154 A E + 0 0 169 -2,-0.3 2,-0.3 51,-0.3 -9,-0.0 -0.908 37.5 138.0-111.0 124.5 17.6 7.7 -3.3 31 155 A M - 0 0 39 -2,-0.5 47,-0.1 51,-0.0 -9,-0.0 -0.989 45.2-105.0-156.9 156.7 17.1 4.4 -1.6 32 156 A G > - 0 0 29 -2,-0.3 4,-1.9 1,-0.1 5,-0.1 -0.179 44.4 -94.8 -76.1 176.2 16.9 0.7 -2.4 33 157 A P H > S+ 0 0 99 0, 0.0 4,-2.1 0, 0.0 5,-0.1 0.819 122.5 52.6 -61.4 -35.6 13.7 -1.5 -2.4 34 158 A T H > S+ 0 0 36 2,-0.2 4,-2.3 1,-0.2 5,-0.1 0.906 110.6 46.9 -67.4 -43.9 14.1 -2.7 1.2 35 159 A E H > S+ 0 0 12 2,-0.2 4,-3.0 1,-0.2 5,-0.2 0.879 111.8 51.8 -64.8 -40.0 14.5 0.9 2.6 36 160 A F H X S+ 0 0 13 -4,-1.9 4,-2.9 2,-0.2 -2,-0.2 0.918 111.3 46.5 -62.6 -44.5 11.5 2.0 0.5 37 161 A K H X S+ 0 0 99 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.883 113.5 49.4 -65.0 -40.1 9.4 -0.8 2.0 38 162 A L H X S+ 0 0 0 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.929 113.0 46.2 -65.3 -46.5 10.6 0.0 5.4 39 163 A L H X S+ 0 0 0 -4,-3.0 4,-2.8 1,-0.2 -2,-0.2 0.905 110.6 53.5 -63.7 -41.3 9.8 3.7 5.0 40 164 A H H X S+ 0 0 66 -4,-2.9 4,-0.9 1,-0.2 -1,-0.2 0.918 109.6 48.3 -59.9 -43.0 6.4 2.9 3.5 41 165 A F H >X S+ 0 0 14 -4,-2.2 4,-0.7 1,-0.2 3,-0.6 0.936 112.9 48.5 -61.8 -46.3 5.7 0.8 6.6 42 166 A F H >< S+ 0 0 0 -4,-2.4 3,-0.8 1,-0.2 -2,-0.2 0.899 107.8 52.4 -61.2 -45.7 6.8 3.6 9.0 43 167 A M H 3< S+ 0 0 8 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.694 115.7 42.2 -67.2 -17.2 4.9 6.3 7.3 44 168 A T H << S+ 0 0 69 -4,-0.9 -1,-0.2 -3,-0.6 -2,-0.2 0.422 120.6 41.3-106.1 -3.4 1.7 4.2 7.6 45 169 A H S << S+ 0 0 60 -3,-0.8 56,-0.4 -4,-0.7 -1,-0.2 -0.436 90.1 174.2-137.3 55.2 2.4 3.0 11.2 46 170 A P + 0 0 53 0, 0.0 2,-2.2 0, 0.0 56,-0.2 -0.146 50.1 7.9 -69.5 161.0 3.7 6.3 12.7 47 171 A E S S+ 0 0 85 54,-4.2 2,-0.1 1,-0.1 55,-0.1 -0.116 97.1 104.8 65.9 -38.9 4.7 7.2 16.3 48 172 A R S S- 0 0 161 -2,-2.2 53,-0.5 -3,-0.1 2,-0.3 -0.416 71.0-121.1 -73.9 148.1 4.4 3.6 17.7 49 173 A V E -D 100 0B 51 51,-0.2 2,-0.4 -2,-0.1 51,-0.3 -0.684 25.6-165.1 -89.7 139.9 7.6 1.6 18.5 50 174 A Y E -D 99 0B 25 49,-3.4 49,-2.8 -2,-0.3 44,-0.2 -0.978 17.4-126.2-126.6 139.9 8.1 -1.7 16.8 51 175 A S > - 0 0 36 -2,-0.4 4,-2.2 47,-0.2 5,-0.2 -0.332 31.6-109.2 -74.6 164.6 10.6 -4.4 17.7 52 176 A R H > S+ 0 0 27 45,-0.2 4,-2.7 1,-0.2 5,-0.2 0.884 121.7 58.1 -62.2 -35.7 13.0 -5.7 15.1 53 177 A E H > S+ 0 0 130 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.884 107.6 45.1 -60.3 -42.0 11.0 -8.9 15.1 54 178 A Q H > S+ 0 0 79 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.904 113.9 49.1 -68.7 -43.1 7.8 -7.0 14.2 55 179 A L H X>S+ 0 0 0 -4,-2.2 4,-2.5 2,-0.2 5,-0.6 0.857 109.3 53.1 -65.4 -35.6 9.6 -5.0 11.5 56 180 A L H X>S+ 0 0 18 -4,-2.7 4,-1.7 -5,-0.2 5,-1.6 0.932 112.4 44.9 -65.0 -44.1 11.1 -8.2 10.1 57 181 A N H <5S+ 0 0 97 -4,-1.9 -2,-0.2 3,-0.2 -1,-0.2 0.909 117.9 42.7 -66.3 -43.6 7.6 -9.8 9.9 58 182 A H H <5S+ 0 0 114 -4,-2.7 -2,-0.2 -5,-0.1 -1,-0.2 0.854 129.7 24.5 -72.7 -35.6 5.9 -6.7 8.4 59 183 A V H <5S+ 0 0 12 -4,-2.5 -3,-0.2 -5,-0.2 -2,-0.2 0.867 131.9 29.0 -99.7 -44.0 8.7 -5.8 5.9 60 184 A W T < - 0 0 114 -2,-0.3 3,-1.1 1,-0.1 4,-0.5 -0.411 30.2-111.5 -83.2 162.3 18.6 -11.7 11.7 68 192 A D T >> S+ 0 0 80 1,-0.2 3,-1.6 2,-0.2 4,-0.8 0.876 114.0 58.8 -59.2 -41.8 17.5 -8.8 13.9 69 193 A R H 3> S+ 0 0 165 1,-0.3 4,-1.7 2,-0.2 -1,-0.2 0.661 89.5 72.7 -65.6 -15.8 20.6 -6.7 13.2 70 194 A T H <> S+ 0 0 28 -3,-1.1 4,-2.0 1,-0.2 -1,-0.3 0.829 93.2 56.9 -65.9 -30.2 19.8 -6.7 9.5 71 195 A V H <> S+ 0 0 0 -3,-1.6 4,-2.1 -4,-0.5 -1,-0.2 0.934 103.6 51.8 -63.8 -44.9 17.1 -4.4 10.5 72 196 A D H X S+ 0 0 28 -4,-0.8 4,-1.7 1,-0.2 -2,-0.2 0.848 107.4 54.3 -58.8 -36.7 19.7 -2.1 12.0 73 197 A V H X S+ 0 0 37 -4,-1.7 4,-1.9 1,-0.2 -1,-0.2 0.916 112.8 40.2 -65.4 -45.2 21.6 -2.2 8.7 74 198 A H H X S+ 0 0 24 -4,-2.0 4,-1.8 2,-0.2 -2,-0.2 0.732 109.5 59.7 -78.3 -20.9 18.6 -1.1 6.7 75 199 A I H X S+ 0 0 0 -4,-2.1 4,-2.6 2,-0.2 -1,-0.2 0.896 107.8 48.6 -69.2 -37.6 17.6 1.5 9.3 76 200 A R H X S+ 0 0 144 -4,-1.7 4,-2.8 2,-0.2 -2,-0.2 0.945 110.8 47.4 -65.1 -51.3 21.1 3.0 8.7 77 201 A R H X S+ 0 0 133 -4,-1.9 4,-1.9 1,-0.2 -1,-0.2 0.847 113.4 50.3 -59.6 -35.1 20.8 3.0 4.9 78 202 A L H X S+ 0 0 0 -4,-1.8 4,-1.5 2,-0.2 -2,-0.2 0.936 110.4 47.5 -70.1 -48.0 17.3 4.5 5.2 79 203 A R H X S+ 0 0 67 -4,-2.6 4,-0.7 1,-0.2 3,-0.5 0.930 111.3 53.5 -56.8 -43.6 18.4 7.3 7.6 80 204 A K H >< S+ 0 0 136 -4,-2.8 3,-0.8 1,-0.2 -1,-0.2 0.907 108.3 48.6 -58.3 -43.8 21.3 7.9 5.2 81 205 A A H 3< S+ 0 0 13 -4,-1.9 -51,-0.3 1,-0.2 -1,-0.2 0.748 111.5 51.4 -68.9 -23.2 18.9 8.3 2.2 82 206 A L H ><>S+ 0 0 0 -4,-1.5 5,-1.3 -3,-0.5 3,-0.7 0.474 83.0 93.9 -93.1 -3.8 16.7 10.7 4.3 83 207 A E G X<5 + 0 0 100 -3,-0.8 3,-2.5 -4,-0.7 -1,-0.2 0.861 64.0 75.3 -57.5 -45.0 19.5 13.1 5.3 84 208 A P G 3 5S+ 0 0 102 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.837 113.0 26.5 -35.9 -48.4 19.2 15.7 2.5 85 209 A G G < 5S- 0 0 38 -3,-0.7 -2,-0.2 -58,-0.1 -3,-0.1 0.323 111.5-112.8-101.6 6.8 16.1 17.1 4.2 86 210 A G T X 5S+ 0 0 14 -3,-2.5 3,-1.5 -4,-0.3 -3,-0.2 0.603 78.8 130.0 74.0 9.2 16.9 16.1 7.7 87 211 A H G > < + 0 0 20 -5,-1.3 3,-2.1 1,-0.3 4,-0.4 0.603 52.0 83.7 -71.8 -8.6 13.9 13.6 7.7 88 212 A D G > S+ 0 0 37 -6,-0.7 3,-1.3 1,-0.3 -1,-0.3 0.784 77.1 71.0 -62.0 -24.9 16.4 11.0 9.0 89 213 A R G < S+ 0 0 130 -3,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.622 87.7 63.5 -66.1 -14.3 15.5 12.5 12.4 90 214 A M G < S+ 0 0 0 -3,-2.1 12,-2.4 1,-0.1 2,-1.0 0.721 86.2 76.0 -82.3 -24.1 12.0 10.9 12.0 91 215 A V E < S-E 101 0B 4 -3,-1.3 2,-0.4 -4,-0.4 10,-0.2 -0.807 76.2-176.4 -89.4 104.1 13.5 7.4 12.1 92 216 A Q E -E 100 0B 30 8,-2.4 8,-1.8 -2,-1.0 2,-0.4 -0.854 25.4-130.7-114.4 141.2 14.3 7.1 15.8 93 217 A T E -E 99 0B 69 -2,-0.4 2,-0.9 6,-0.2 6,-0.2 -0.683 9.6-152.7 -86.0 129.8 15.9 4.4 17.9 94 218 A V E >> -E 98 0B 26 4,-3.1 3,-3.0 -2,-0.4 4,-2.1 -0.852 41.0-107.1-104.5 95.5 14.1 3.2 21.0 95 219 A R T 34 S- 0 0 242 -2,-0.9 4,-0.0 1,-0.3 -1,-0.0 0.177 88.7 -18.9 -26.1 112.7 17.0 2.1 23.1 96 220 A G T 34 S+ 0 0 83 1,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.663 131.7 74.3 56.4 20.4 17.2 -1.7 23.4 97 221 A T T <4 S- 0 0 78 -3,-3.0 2,-0.3 1,-0.3 -45,-0.2 0.651 97.0 -96.9-127.2 -42.7 13.5 -1.9 22.3 98 222 A G E < - E 0 94B 0 -4,-2.1 -4,-3.1 -47,-0.2 -1,-0.3 -0.987 45.8 -54.4 157.0-145.7 13.1 -1.2 18.6 99 223 A Y E -DE 50 93B 8 -49,-2.8 -49,-3.4 -2,-0.3 2,-0.3 -0.939 31.9-174.2-135.9 158.1 12.3 1.6 16.2 100 224 A R E -DE 49 92B 91 -8,-1.8 -8,-2.4 -2,-0.3 2,-0.6 -0.967 22.2-132.9-145.0 154.7 9.5 4.2 15.7 101 225 A F E + E 0 91B 0 -53,-0.5 -54,-4.2 -56,-0.4 2,-0.4 -0.965 36.9 176.4-113.6 117.8 8.8 6.8 13.0 102 226 A S - 0 0 4 -12,-2.4 -2,-0.0 -2,-0.6 -59,-0.0 -0.949 43.2-153.9-132.7 147.5 7.9 10.2 14.5 103 227 A T S S+ 0 0 53 -2,-0.4 2,-0.6 2,-0.1 -1,-0.1 0.591 83.4 87.0 -84.6 -11.7 7.1 13.8 13.5 104 228 A R 0 0 190 1,-0.2 -2,-0.1 -14,-0.1 -57,-0.0 -0.809 360.0 360.0 -96.1 122.6 8.3 14.8 17.0 105 229 A F 0 0 121 -2,-0.6 -1,-0.2 -13,-0.0 -2,-0.1 0.269 360.0 360.0-171.1 360.0 12.0 15.5 17.4