==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 02-MAY-02 1GYZ . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L20; . SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; . AUTHOR S.RAIBAUD,I.LEBARS,F.BONTEMS,F.DARDEL . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4178.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 70.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 59 A W 0 0 92 0, 0.0 35,-0.2 0, 0.0 34,-0.1 0.000 360.0 360.0 360.0 67.0 -2.4 -11.0 0.1 2 60 A I > + 0 0 101 34,-0.1 4,-0.8 31,-0.1 3,-0.3 0.484 360.0 35.3-147.5 -61.0 -5.2 -8.9 -1.4 3 61 A A H > S+ 0 0 63 2,-0.2 4,-1.5 1,-0.2 13,-0.0 0.375 107.7 69.7 -97.0 0.7 -7.8 -7.7 1.0 4 62 A R H > S+ 0 0 87 2,-0.2 4,-0.8 3,-0.2 -1,-0.2 0.697 99.6 49.5 -81.6 -24.1 -5.2 -7.2 3.6 5 63 A I H > S+ 0 0 0 -3,-0.3 4,-1.9 2,-0.2 -2,-0.2 0.845 111.9 47.5 -78.7 -39.5 -4.0 -4.4 1.4 6 64 A N H X S+ 0 0 56 -4,-0.8 4,-1.0 1,-0.2 -2,-0.2 0.896 111.7 51.5 -63.7 -42.8 -7.5 -3.1 1.3 7 65 A A H < S+ 0 0 51 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.745 111.7 46.9 -68.6 -26.5 -7.7 -3.5 5.0 8 66 A A H >< S+ 0 0 15 -4,-0.8 3,-0.7 1,-0.2 -1,-0.2 0.867 114.2 43.1 -83.2 -36.6 -4.5 -1.6 5.5 9 67 A V H >X>S+ 0 0 0 -4,-1.9 4,-1.5 1,-0.2 3,-1.1 0.538 92.1 81.4 -91.6 -7.4 -5.1 1.4 3.2 10 68 A R T 3<5S+ 0 0 179 -4,-1.0 -1,-0.2 1,-0.3 -2,-0.1 0.535 78.7 72.3 -80.1 -4.5 -8.7 2.0 4.2 11 69 A A T <45S+ 0 0 83 -3,-0.7 -1,-0.3 1,-0.1 -2,-0.1 0.831 104.5 38.5 -69.5 -34.9 -7.5 3.8 7.3 12 70 A Y T <45S- 0 0 105 -3,-1.1 -2,-0.2 -4,-0.2 -1,-0.1 0.934 121.1 -95.5 -86.9 -50.4 -6.4 6.7 5.0 13 71 A G T <5S+ 0 0 65 -4,-1.5 -3,-0.2 1,-0.5 2,-0.1 0.161 85.6 120.8 145.3 -12.7 -9.2 6.9 2.5 14 72 A L < - 0 0 31 -5,-1.1 -1,-0.5 1,-0.1 -2,-0.2 -0.482 48.5-158.8 -75.5 151.5 -7.6 4.8 -0.2 15 73 A N - 0 0 84 -2,-0.1 -1,-0.1 -3,-0.1 -5,-0.1 0.046 49.8-101.5-121.6 20.1 -9.6 1.9 -1.2 16 74 A Y S > S+ 0 0 41 -7,-0.1 4,-1.3 -11,-0.1 -2,-0.1 -0.028 114.9 79.0 84.8 -24.2 -6.6 0.1 -2.7 17 75 A S H > S+ 0 0 72 2,-0.2 4,-0.8 1,-0.2 -1,-0.1 0.866 98.6 36.2 -82.3 -38.3 -7.8 1.1 -6.2 18 76 A T H > S+ 0 0 55 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.766 116.2 55.5 -86.2 -25.2 -6.5 4.6 -6.1 19 77 A F H > S+ 0 0 3 1,-0.2 4,-1.0 2,-0.2 -2,-0.2 0.894 103.2 58.9 -64.1 -40.2 -3.5 3.5 -4.2 20 78 A I H X S+ 0 0 81 -4,-1.3 4,-0.6 1,-0.2 -2,-0.2 0.815 107.0 43.7 -59.6 -38.7 -3.0 1.0 -7.0 21 79 A N H >X S+ 0 0 61 -4,-0.8 4,-1.2 1,-0.2 3,-0.9 0.879 109.7 56.0 -78.2 -38.3 -2.7 3.8 -9.6 22 80 A G H 3X S+ 0 0 0 -4,-1.7 4,-1.3 1,-0.3 -1,-0.2 0.623 96.2 66.3 -68.8 -18.8 -0.5 5.9 -7.4 23 81 A L H 3X>S+ 0 0 9 -4,-1.0 5,-2.5 2,-0.2 4,-2.0 0.853 103.7 45.5 -64.3 -37.6 1.9 3.0 -7.1 24 82 A K H <<5S+ 0 0 175 -3,-0.9 -2,-0.2 -4,-0.6 -1,-0.2 0.790 109.7 54.5 -78.1 -28.1 2.6 3.3 -10.8 25 83 A K H <5S+ 0 0 114 -4,-1.2 -1,-0.2 1,-0.2 -2,-0.2 0.812 109.6 47.7 -72.2 -30.6 2.9 7.1 -10.4 26 84 A A H <5S- 0 0 33 -4,-1.3 -2,-0.2 2,-0.2 -1,-0.2 0.894 110.8-129.2 -72.9 -41.6 5.5 6.4 -7.7 27 85 A G T <5S+ 0 0 61 -4,-2.0 2,-0.5 1,-0.3 -3,-0.2 0.702 72.2 120.8 97.9 28.5 7.1 4.0 -10.1 28 86 A I < - 0 0 48 -5,-2.5 2,-1.4 -6,-0.1 -1,-0.3 -0.960 54.8-153.2-129.0 102.2 7.2 1.3 -7.4 29 87 A E + 0 0 167 -2,-0.5 3,-0.1 -3,-0.1 2,-0.1 -0.657 47.1 132.6 -88.0 91.2 5.2 -1.7 -8.7 30 88 A L + 0 0 64 -2,-1.4 -7,-0.1 1,-0.1 -6,-0.0 -0.389 26.6 59.3-127.9-167.0 4.2 -3.0 -5.3 31 89 A D + 0 0 2 -2,-0.1 -1,-0.1 1,-0.1 3,-0.1 0.809 64.7 132.7 44.5 45.4 1.3 -4.4 -3.2 32 90 A R S S- 0 0 205 1,-0.4 2,-0.2 -3,-0.1 -1,-0.1 0.584 83.1 -50.2-101.6 -9.8 0.9 -7.1 -5.7 33 91 A K S S+ 0 0 126 -31,-0.0 -1,-0.4 -28,-0.0 -31,-0.1 -0.153 125.7 34.5 136.2 126.4 0.8 -9.9 -3.1 34 92 A I S S+ 0 0 99 -2,-0.2 4,-0.1 -3,-0.1 -32,-0.1 0.609 98.2 76.6 82.3 22.1 3.2 -10.4 -0.3 35 93 A L S >> S+ 0 0 13 -34,-0.1 4,-1.3 2,-0.1 3,-1.0 0.446 82.6 73.7-103.7 -28.8 3.9 -6.8 0.5 36 94 A A H 3> S+ 0 0 0 1,-0.3 4,-0.7 2,-0.3 5,-0.2 0.543 82.4 68.0 -59.6 -14.9 0.5 -7.1 2.0 37 95 A D H >> S+ 0 0 63 2,-0.2 4,-2.7 1,-0.2 3,-1.1 0.965 105.3 39.5 -60.7 -55.5 2.3 -9.0 4.7 38 96 A M H <> S+ 0 0 30 -3,-1.0 4,-1.6 1,-0.3 8,-0.5 0.804 102.5 74.7 -67.7 -26.3 4.0 -5.8 5.7 39 97 A A H 3< S+ 0 0 4 -4,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.810 119.5 9.4 -57.1 -33.3 0.9 -3.8 5.1 40 98 A V H << S+ 0 0 79 -3,-1.1 -1,-0.2 -4,-0.7 -2,-0.2 0.751 135.5 44.0-109.0 -43.2 -0.7 -5.1 8.3 41 99 A R H < S+ 0 0 166 -4,-2.7 -3,-0.2 1,-0.3 -2,-0.2 0.676 119.0 37.5 -95.3 -21.6 2.1 -6.9 10.1 42 100 A D X + 0 0 71 -4,-1.6 4,-2.5 -5,-0.4 3,-0.4 -0.729 63.8 169.9-125.0 80.4 5.0 -4.5 9.6 43 101 A P H > S+ 0 0 76 0, 0.0 4,-1.4 0, 0.0 -1,-0.1 0.582 72.9 65.8 -75.9 -7.1 3.3 -1.0 9.9 44 102 A Q H > S+ 0 0 147 2,-0.2 4,-0.6 3,-0.1 -5,-0.0 0.945 111.3 32.7 -72.2 -51.8 6.8 0.6 10.0 45 103 A A H >> S+ 0 0 30 -3,-0.4 4,-1.8 1,-0.2 3,-0.5 0.814 114.2 62.1 -78.8 -31.4 7.6 -0.4 6.5 46 104 A F H 3X S+ 0 0 9 -4,-2.5 4,-2.2 -8,-0.5 -1,-0.2 0.929 101.3 52.5 -51.7 -46.5 4.0 -0.1 5.5 47 105 A E H 3X S+ 0 0 126 -4,-1.4 4,-1.4 1,-0.2 -1,-0.2 0.717 105.6 55.9 -67.2 -19.5 4.2 3.6 6.4 48 106 A Q H S+ 0 0 2 -4,-1.7 4,-1.5 2,-0.2 5,-0.9 0.576 106.7 64.1 -87.1 -10.2 2.6 6.9 -2.7 54 112 A K H <>S+ 0 0 88 -4,-1.0 5,-2.4 3,-0.2 6,-0.4 0.882 111.5 33.7 -80.8 -36.8 1.3 9.8 -0.6 55 113 A E H <5S+ 0 0 110 -4,-1.4 -2,-0.2 3,-0.2 -3,-0.1 0.905 120.6 50.2 -80.6 -41.3 3.5 12.3 -2.3 56 114 A A H <5S+ 0 0 19 -4,-1.5 -2,-0.2 -5,-0.2 -3,-0.2 0.819 131.1 10.9 -66.0 -36.8 3.5 10.6 -5.6 57 115 A L T <5S+ 0 0 26 -4,-1.5 3,-0.3 -5,-0.1 -3,-0.2 0.840 128.4 32.8-100.3 -72.1 -0.3 10.3 -5.7 58 116 A Q T