==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ICE-BINDING PROTEIN 25-OCT-96 1GZI . COMPND 2 MOLECULE: HPLC-12 TYPE III ANTIFREEZE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR A.A.ANTSON,S.LEWIS,D.I.ROPER,D.J.SMITH,R.E.HUBBARD . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3741.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 58.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 24.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 18.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A N 0 0 183 0, 0.0 2,-0.6 0, 0.0 25,-0.0 0.000 360.0 360.0 360.0-165.6 18.6 -7.0 -2.2 2 2 A Q - 0 0 128 25,-0.1 25,-0.6 31,-0.0 2,-0.3 -0.717 360.0-156.8 -84.0 120.4 20.8 -4.2 -0.9 3 3 A A E -A 26 0A 29 -2,-0.6 31,-1.8 23,-0.2 2,-0.3 -0.652 6.2-162.9 -91.5 151.5 19.1 -2.0 1.6 4 4 A S E -AB 25 33A 0 21,-3.0 21,-1.9 -2,-0.3 2,-0.3 -0.855 32.5 -89.5-120.9 171.9 20.1 1.6 2.4 5 5 A V E -A 24 0A 0 27,-2.7 50,-2.5 -2,-0.3 2,-0.4 -0.554 45.4-173.4 -78.9 132.9 19.4 3.9 5.2 6 6 A V E -AC 23 54A 0 17,-2.7 17,-2.8 -2,-0.3 2,-0.3 -0.964 31.7-103.4-128.4 142.8 16.3 5.9 4.6 7 7 A A E -A 22 0A 0 46,-2.6 45,-2.5 -2,-0.4 15,-0.2 -0.464 24.5-165.7 -68.4 127.0 15.0 8.8 6.8 8 8 A N S S+ 0 0 69 13,-2.8 2,-0.3 -2,-0.3 14,-0.2 0.544 77.7 6.3 -95.0 -3.9 12.0 7.6 9.0 9 9 A Q S S- 0 0 75 12,-0.6 2,-0.3 40,-0.1 43,-0.1 -0.933 103.9 -69.6-156.6 170.6 11.1 11.2 9.8 10 10 A L - 0 0 99 -2,-0.3 -2,-0.1 41,-0.1 38,-0.0 -0.570 48.0-153.9 -62.1 133.2 12.3 14.7 8.6 11 11 A I B -D 49 0B 0 38,-2.7 38,-3.1 -2,-0.3 3,-0.1 -0.950 14.0-138.9-114.9 110.0 15.8 15.1 10.1 12 12 A P > - 0 0 57 0, 0.0 3,-0.8 0, 0.0 33,-0.3 -0.341 32.5 -78.6 -63.6 160.8 16.5 18.8 10.5 13 13 A I T 3 S+ 0 0 96 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.111 111.6 10.5 -54.9 148.3 19.9 20.3 9.7 14 14 A N T 3 S+ 0 0 89 31,-1.5 2,-0.4 1,-0.2 -1,-0.2 0.836 92.7 139.8 49.6 42.5 22.7 19.9 12.1 15 15 A T < - 0 0 41 -3,-0.8 30,-1.5 30,-0.2 2,-0.3 -0.934 56.2-117.5-121.2 130.5 20.9 17.3 14.2 16 16 A A B -E 44 0C 47 -2,-0.4 28,-0.3 28,-0.2 2,-0.2 -0.577 36.8-113.4 -70.6 136.4 22.5 14.3 15.7 17 17 A L - 0 0 1 26,-3.1 25,-3.1 23,-0.4 2,-0.3 -0.476 32.5-169.1 -74.5 138.4 21.0 11.0 14.3 18 18 A T > - 0 0 56 23,-0.2 3,-1.5 -2,-0.2 4,-0.3 -0.818 36.4-106.6-116.3 165.0 19.1 8.7 16.6 19 19 A L G > S+ 0 0 116 -2,-0.3 3,-1.2 1,-0.3 -2,-0.0 0.806 116.9 61.4 -63.2 -25.3 17.8 5.2 15.9 20 20 A V G 3 S+ 0 0 94 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.739 99.1 59.6 -75.6 -11.6 14.2 6.3 15.6 21 21 A M G < S+ 0 0 17 -3,-1.5 -13,-2.8 1,-0.1 -12,-0.6 0.551 96.1 68.4 -87.5 -15.7 15.3 8.4 12.6 22 22 A M E < +A 7 0A 15 -3,-1.2 2,-0.2 -4,-0.3 -15,-0.2 -0.951 50.7 167.8-120.5 117.2 16.6 5.6 10.4 23 23 A R E -A 6 0A 89 -17,-2.8 -17,-2.7 -2,-0.5 2,-0.4 -0.607 29.5-123.6-106.3 179.2 14.8 2.8 8.7 24 24 A S E +A 5 0A 69 -19,-0.2 2,-0.3 -2,-0.2 -19,-0.2 -0.953 34.1 159.1-129.9 133.0 16.1 0.5 6.0 25 25 A E E -A 4 0A 71 -21,-1.9 -21,-3.0 -2,-0.4 2,-0.8 -0.981 45.9-107.9-146.6 159.6 14.7 -0.1 2.6 26 26 A V E +A 3 0A 91 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.726 60.0 151.1 -88.0 105.3 15.7 -1.4 -0.8 27 27 A V - 0 0 36 -2,-0.8 4,-0.1 -25,-0.6 -25,-0.1 -0.912 38.1 -95.2-133.6 166.6 15.9 1.8 -2.9 28 28 A T S S+ 0 0 133 -2,-0.3 2,-0.1 2,-0.1 26,-0.1 -0.999 99.5 39.0-140.0 136.2 17.7 3.2 -5.9 29 29 A P S S- 0 0 91 0, 0.0 2,-0.3 0, 0.0 25,-0.0 0.573 98.6-120.5 -72.9 164.3 20.0 4.8 -6.1 30 30 A V - 0 0 70 -2,-0.1 -2,-0.1 1,-0.1 2,-0.1 -0.574 35.3-179.7 -78.0 140.7 21.8 3.0 -3.3 31 31 A G - 0 0 10 1,-0.3 25,-0.2 -2,-0.3 3,-0.1 -0.075 49.2 -22.9-117.2-153.5 22.9 5.1 -0.3 32 32 A I S S- 0 0 0 23,-2.5 -27,-2.7 -27,-0.2 -1,-0.3 -0.397 82.3-102.3 -61.0 131.4 24.7 4.4 2.9 33 33 A P B > -B 4 0A 42 0, 0.0 3,-1.8 0, 0.0 -29,-0.2 -0.279 19.9-124.2 -60.5 143.7 24.3 0.7 3.7 34 34 A A G > S+ 0 0 22 -31,-1.8 3,-2.0 1,-0.3 -30,-0.1 0.864 107.8 67.7 -62.9 -24.2 21.8 -0.3 6.3 35 35 A E G 3 S+ 0 0 153 1,-0.3 4,-0.3 -32,-0.3 -1,-0.3 0.754 92.0 62.8 -69.0 -17.4 24.5 -2.2 8.2 36 36 A D G <> S+ 0 0 14 -3,-1.8 4,-1.4 1,-0.2 3,-0.4 0.568 72.9 99.1 -87.3 4.8 26.1 1.2 9.0 37 37 A I H X> S+ 0 0 23 -3,-2.0 4,-1.0 1,-0.2 3,-0.9 0.921 76.1 57.0 -55.1 -51.3 23.1 2.4 11.0 38 38 A P H >4 S+ 0 0 93 0, 0.0 3,-0.7 0, 0.0 -1,-0.2 0.943 109.5 45.6 -52.9 -37.4 24.6 1.6 14.3 39 39 A R H 34 S+ 0 0 121 -3,-0.4 -2,-0.2 -4,-0.3 -3,-0.1 0.793 102.1 63.3 -88.5 -7.4 27.6 3.8 13.6 40 40 A L H X< S+ 0 0 0 -4,-1.4 3,-2.6 -3,-0.9 -23,-0.4 0.681 75.7 116.7 -77.9 -20.7 25.7 6.8 12.2 41 41 A V T << S+ 0 0 54 -4,-1.0 -23,-0.2 -3,-0.7 3,-0.1 -0.296 84.7 11.3 -54.3 127.9 24.1 7.2 15.7 42 42 A S T 3 S+ 0 0 93 -25,-3.1 -1,-0.3 1,-0.3 2,-0.1 0.251 97.8 121.6 79.8 -6.5 25.1 10.6 17.1 43 43 A M < - 0 0 45 -3,-2.6 -26,-3.1 -27,-0.1 2,-0.4 -0.522 60.0-126.4 -78.3 154.6 26.6 11.8 13.8 44 44 A Q B -E 16 0C 77 17,-0.3 17,-3.0 -28,-0.3 -28,-0.2 -0.823 9.4-129.0-103.0 148.3 25.0 15.0 12.5 45 45 A V B -F 60 0D 0 -30,-1.5 -31,-1.5 -2,-0.4 -30,-0.2 -0.582 7.5-145.2 -87.0 155.8 23.6 15.7 9.1 46 46 A N S S+ 0 0 58 13,-2.5 2,-0.3 -2,-0.2 14,-0.1 0.268 80.9 26.4-102.9 6.9 24.7 18.8 7.1 47 47 A R S S- 0 0 100 12,-0.4 2,-0.3 -35,-0.2 -32,-0.2 -0.971 96.7 -83.7-155.2 161.9 21.3 19.5 5.5 48 48 A A - 0 0 55 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.611 41.4-151.8 -69.3 140.8 17.7 18.9 6.3 49 49 A V B -D 11 0B 2 -38,-3.1 -38,-2.7 -2,-0.3 -40,-0.1 -0.922 11.6-138.4-118.6 108.2 16.7 15.4 5.1 50 50 A P > - 0 0 74 0, 0.0 3,-2.1 0, 0.0 -43,-0.3 -0.195 37.4 -78.0 -59.9 156.0 13.1 15.1 4.2 51 51 A L T 3 S+ 0 0 112 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.059 118.3 18.0 -52.4 134.9 11.0 12.0 5.2 52 52 A G T 3 S+ 0 0 34 -45,-2.5 -1,-0.3 1,-0.3 2,-0.2 0.453 89.6 140.7 79.1 10.5 11.7 9.0 2.9 53 53 A T < - 0 0 40 -3,-2.1 -46,-2.6 -46,-0.1 2,-0.4 -0.545 56.2-119.5 -83.9 138.3 15.0 10.4 1.6 54 54 A T B -C 6 0A 23 -48,-0.2 2,-0.4 -2,-0.2 -48,-0.2 -0.661 28.5-125.4 -73.6 132.3 17.9 8.0 1.1 55 55 A L - 0 0 0 -50,-2.5 -23,-2.5 -2,-0.4 -50,-0.3 -0.583 29.3-163.4 -82.5 129.2 20.9 9.1 3.3 56 56 A M > - 0 0 40 -2,-0.4 3,-2.2 -25,-0.2 4,-0.4 -0.745 31.4-109.1-113.2 155.8 24.0 9.5 1.2 57 57 A P G > S+ 0 0 65 0, 0.0 3,-1.2 0, 0.0 6,-0.3 0.854 115.8 59.1 -53.8 -33.7 27.6 9.7 2.5 58 58 A D G 3 S+ 0 0 98 1,-0.2 -12,-0.1 4,-0.1 4,-0.1 0.667 96.1 63.2 -78.0 -5.1 27.9 13.4 1.6 59 59 A M G < S+ 0 0 24 -3,-2.2 -13,-2.5 -14,-0.1 2,-0.5 0.576 90.6 75.0 -90.9 -10.8 24.9 14.3 3.9 60 60 A V B X S-F 45 0D 6 -3,-1.2 3,-1.7 -4,-0.4 -15,-0.2 -0.909 82.4-124.4-113.3 124.6 26.6 13.2 7.1 61 61 A K T 3 S+ 0 0 87 -17,-3.0 -17,-0.3 -2,-0.5 -2,-0.1 -0.416 93.5 4.3 -65.7 126.4 29.3 15.2 8.8 62 62 A G T 3 S+ 0 0 80 1,-0.2 2,-0.4 -2,-0.1 -1,-0.3 0.589 89.5 147.8 85.1 1.1 32.5 13.1 9.3 63 63 A Y < + 0 0 29 -3,-1.7 2,-0.3 -6,-0.3 -1,-0.2 -0.730 10.4 158.4 -81.8 134.1 31.2 10.0 7.6 64 64 A A 0 0 80 -2,-0.4 0, 0.0 0, 0.0 0, 0.0 -0.934 360.0 360.0-149.3 130.4 33.8 7.8 5.8 65 65 A A 0 0 125 -2,-0.3 -33,-0.0 -33,-0.0 0, 0.0 -0.414 360.0 360.0 -78.4 360.0 33.1 4.2 5.0