==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING 01-JUL-02 1H0Y . COMPND 2 MOLECULE: DNA BINDING PROTEIN SSO10B; . SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; . AUTHOR B.N.WARDLEWORTH,R.J.M.RUSSELL,S.D.BELL,G.L.TAYLOR,M.F.WHITE . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5889.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 78.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 25.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 27.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 12 A S 0 0 143 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -79.6 -34.2 30.9 -57.1 2 13 A N + 0 0 52 1,-0.3 28,-1.8 27,-0.1 2,-0.5 0.492 360.0 117.4 91.4 9.4 -33.7 31.7 -60.9 3 14 A V E -a 30 0A 52 26,-0.2 2,-0.7 28,-0.1 -1,-0.3 -0.921 47.7-161.4-110.7 131.5 -35.9 28.9 -62.1 4 15 A V E -a 31 0A 11 26,-3.1 28,-2.6 -2,-0.5 2,-0.6 -0.923 7.8-159.4-113.2 107.5 -39.1 29.6 -64.0 5 16 A L E -a 32 0A 106 -2,-0.7 2,-0.4 26,-0.2 28,-0.2 -0.762 16.7-132.4 -89.0 121.7 -41.5 26.7 -64.0 6 17 A I + 0 0 8 26,-3.5 28,-0.4 -2,-0.6 31,-0.1 -0.584 36.9 169.0 -74.4 123.9 -44.0 26.8 -66.8 7 18 A G - 0 0 25 -2,-0.4 33,-0.1 2,-0.1 -1,-0.1 -0.183 52.6 -70.7-113.5-151.8 -47.4 26.2 -65.5 8 19 A K S S+ 0 0 155 -2,-0.1 3,-0.1 2,-0.0 -2,-0.1 0.535 94.2 109.1 -85.3 -7.3 -51.0 26.4 -66.8 9 20 A K S S- 0 0 124 1,-0.1 5,-0.1 2,-0.1 -2,-0.1 -0.330 83.9 -84.5 -69.4 153.0 -50.9 30.2 -66.7 10 21 A P >> - 0 0 87 0, 0.0 3,-1.9 0, 0.0 4,-0.7 -0.212 43.3-107.4 -57.0 145.0 -50.9 32.2 -70.1 11 22 A V H >> S+ 0 0 37 1,-0.3 4,-2.2 2,-0.2 3,-1.2 0.847 114.1 65.8 -41.5 -53.2 -47.4 32.7 -71.6 12 23 A M H 3> S+ 0 0 78 1,-0.3 4,-2.1 2,-0.2 -1,-0.3 0.818 95.0 62.0 -43.9 -35.6 -47.1 36.4 -70.8 13 24 A N H <> S+ 0 0 66 -3,-1.9 4,-2.2 1,-0.2 -1,-0.3 0.946 110.2 38.3 -56.2 -49.5 -47.1 35.4 -67.2 14 25 A Y H S+ 0 0 35 -4,-1.7 5,-1.2 -5,-0.2 3,-0.3 0.979 119.1 37.8 -57.1 -62.3 -35.5 38.1 -63.3 22 33 A L H ><5S+ 0 0 0 -4,-2.0 2,-3.8 1,-0.3 3,-1.2 0.965 112.4 54.8 -53.6 -64.1 -33.1 39.1 -66.1 23 34 A N T 3<5S+ 0 0 133 -4,-2.7 -1,-0.3 1,-0.3 4,-0.1 -0.352 106.5 60.0 -70.1 61.8 -33.9 42.8 -66.2 24 35 A Q T 3 5S- 0 0 125 -2,-3.8 -1,-0.3 -3,-0.3 2,-0.3 0.141 130.0 -77.5-177.7 24.0 -33.1 42.8 -62.5 25 36 A G T < 5S+ 0 0 63 -3,-1.2 -3,-0.2 1,-0.3 2,-0.1 -0.206 92.5 123.0 98.9 -45.3 -29.5 41.6 -62.3 26 37 A V < - 0 0 43 -5,-1.2 -1,-0.3 -2,-0.3 -2,-0.2 -0.349 36.4-176.1 -56.9 121.8 -30.0 37.9 -62.8 27 38 A S + 0 0 69 1,-0.2 61,-3.1 -2,-0.1 2,-0.4 0.635 66.4 37.4 -95.3 -19.6 -27.9 37.0 -65.9 28 39 A E E + B 0 87A 46 59,-0.3 2,-0.3 -7,-0.1 59,-0.2 -0.990 61.2 170.9-139.7 131.1 -29.0 33.3 -66.2 29 40 A I E - B 0 86A 0 57,-2.1 57,-2.1 -2,-0.4 2,-0.4 -0.797 23.6-135.5-128.0 170.5 -32.4 31.7 -65.6 30 41 A V E -aB 3 85A 18 -28,-1.8 -26,-3.1 -2,-0.3 2,-0.7 -0.986 8.7-151.3-133.0 120.3 -33.7 28.2 -66.3 31 42 A I E -aB 4 84A 1 53,-3.3 53,-3.0 -2,-0.4 2,-0.4 -0.843 21.2-175.7 -93.5 121.0 -37.0 27.6 -67.9 32 43 A K E +aB 5 83A 61 -28,-2.6 -26,-3.5 -2,-0.7 2,-0.3 -0.906 12.6 149.9-116.9 146.2 -38.4 24.3 -66.7 33 44 A A E - B 0 82A 1 49,-1.6 49,-2.4 -2,-0.4 2,-0.3 -0.954 19.4-162.7-167.1 156.0 -41.6 22.7 -67.8 34 45 A R E > + B 0 81A 118 -28,-0.4 3,-1.3 -2,-0.3 47,-0.2 -0.956 52.6 7.4-144.2 163.4 -43.1 19.3 -68.3 35 46 A G T > S- 0 0 32 45,-2.4 3,-1.8 -2,-0.3 4,-0.2 -0.331 126.9 -14.4 68.3-147.0 -45.9 17.6 -70.1 36 47 A R T >> S+ 0 0 234 1,-0.3 3,-1.0 2,-0.2 4,-0.6 0.693 128.2 74.0 -63.4 -18.2 -48.0 19.7 -72.5 37 48 A A H <> S+ 0 0 6 -3,-1.3 4,-1.7 1,-0.2 -1,-0.3 0.610 72.8 84.8 -71.0 -12.9 -46.4 22.8 -71.0 38 49 A I H <> S+ 0 0 39 -3,-1.8 4,-1.3 2,-0.2 -1,-0.2 0.892 85.4 55.0 -56.3 -41.1 -43.2 22.0 -72.8 39 50 A S H X> S+ 0 0 78 -3,-1.0 4,-2.3 1,-0.2 3,-1.0 0.963 108.9 47.7 -54.2 -55.1 -44.6 23.7 -75.9 40 51 A K H 3X S+ 0 0 35 -4,-0.6 4,-2.6 1,-0.3 -1,-0.2 0.763 102.4 64.0 -58.9 -28.5 -45.1 26.8 -73.8 41 52 A A H 3X S+ 0 0 0 -4,-1.7 4,-1.6 2,-0.2 -1,-0.3 0.865 108.3 40.8 -66.7 -33.8 -41.6 26.6 -72.4 42 53 A V H S+ 0 0 1 -4,-2.1 5,-1.6 -5,-0.3 4,-0.8 0.982 118.2 36.7 -61.7 -58.5 -38.2 36.5 -74.5 49 60 A R H <5S+ 0 0 83 -4,-3.0 6,-0.4 3,-0.2 -1,-0.2 0.538 124.2 46.4 -74.8 -3.8 -35.2 36.4 -76.7 50 61 A N H <5S+ 0 0 94 -4,-1.2 -3,-0.2 -5,-0.2 -2,-0.2 0.880 122.7 16.1-104.0 -64.0 -37.2 37.7 -79.6 51 62 A R H <5S+ 0 0 163 -4,-1.6 -3,-0.1 -5,-0.3 -2,-0.1 0.226 134.3 34.5 -98.3 21.3 -39.4 40.6 -78.9 52 63 A F T <5S+ 0 0 65 -4,-0.8 -3,-0.2 -5,-0.3 -4,-0.1 0.619 131.1 10.9-136.2 -38.9 -37.8 41.7 -75.7 53 64 A L S >> - 0 0 46 4,-3.4 3,-1.1 -2,-0.6 -1,-0.0 -0.134 33.7 -92.0 -77.5 177.0 -50.9 10.4 -59.4 72 83 A Q T 3 S+ 0 0 165 1,-0.3 -1,-0.1 2,-0.2 -2,-0.0 0.903 126.7 57.8 -57.9 -43.9 -53.8 10.8 -57.0 73 84 A D T 3 S- 0 0 124 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.751 122.2-110.6 -57.1 -23.1 -54.6 7.1 -57.0 74 85 A G S < S+ 0 0 48 -3,-1.1 2,-0.2 1,-0.4 -2,-0.2 0.403 75.6 141.0 101.1 3.2 -51.1 6.7 -55.8 75 86 A R - 0 0 180 -5,-0.1 -4,-3.4 1,-0.1 -1,-0.4 -0.509 52.0-117.9 -81.5 144.7 -50.2 5.2 -59.2 76 87 A Q E + C 0 70A 153 -6,-0.2 2,-0.3 -2,-0.2 -6,-0.2 -0.607 38.6 159.2 -87.9 142.5 -47.0 5.9 -61.0 77 88 A S E - C 0 69A 72 -8,-2.6 -8,-3.8 -2,-0.3 2,-0.3 -0.981 27.2-132.4-154.0 148.8 -46.8 7.6 -64.4 78 89 A R E - C 0 68A 157 -2,-0.3 2,-0.3 -10,-0.3 -10,-0.2 -0.848 14.2-168.2-115.2 151.2 -44.2 9.5 -66.3 79 90 A V E - C 0 67A 52 -12,-1.7 -12,-2.3 -2,-0.3 2,-0.1 -0.966 27.5-109.3-130.8 147.8 -44.1 12.8 -68.1 80 91 A S E - C 0 66A 71 -2,-0.3 -45,-2.4 -14,-0.2 2,-0.3 -0.336 35.3-161.3 -72.7 156.0 -41.6 14.4 -70.4 81 92 A T E -BC 34 65A 29 -16,-3.5 -16,-2.3 -47,-0.2 2,-0.3 -0.943 10.4-161.8-138.6 158.4 -39.6 17.3 -69.2 82 93 A I E -BC 33 64A 21 -49,-2.4 -49,-1.6 -2,-0.3 2,-0.4 -0.978 1.1-166.2-139.8 150.0 -37.6 20.1 -70.7 83 94 A E E -BC 32 63A 50 -20,-1.9 -20,-2.9 -2,-0.3 2,-0.6 -0.963 5.4-176.2-140.4 115.6 -35.0 22.4 -69.2 84 95 A I E -BC 31 62A 7 -53,-3.0 -53,-3.3 -2,-0.4 2,-0.5 -0.940 5.6-167.9-118.9 108.6 -33.9 25.5 -71.1 85 96 A A E +BC 30 61A 6 -24,-3.1 -25,-2.1 -2,-0.6 -24,-1.8 -0.845 12.2 177.5 -98.3 128.5 -31.1 27.4 -69.5 86 97 A I E -BC 29 59A 0 -57,-2.1 -57,-2.1 -2,-0.5 2,-0.3 -0.936 6.9-170.8-130.2 152.1 -30.5 30.9 -70.9 87 98 A R E -BC 28 58A 96 -29,-2.5 -29,-2.5 -2,-0.3 -59,-0.3 -0.987 38.0 -84.5-145.1 153.4 -28.1 33.7 -70.1 88 99 A K E C 0 57A 89 -61,-3.1 -31,-0.3 -2,-0.3 -32,-0.1 -0.359 360.0 360.0 -56.9 121.6 -27.4 37.4 -70.9 89 100 A K 0 0 178 -33,-2.4 -1,-0.1 -2,-0.1 -32,-0.0 -0.484 360.0 360.0 -60.6 360.0 -25.2 37.3 -74.0