==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 15-APR-09 3H34 . COMPND 2 MOLECULE: CYTOCHROME C7; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; . AUTHOR P.R.POKKULURI,M.SCHIFFER . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6135.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 8.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 24.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 97 0, 0.0 16,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 157.1 1.6 16.4 10.6 2 2 A D + 0 0 104 1,-0.2 16,-2.0 15,-0.2 17,-0.5 0.812 360.0 35.2 -67.6 -32.6 4.8 18.2 11.7 3 3 A V S S- 0 0 82 13,-0.2 2,-0.4 14,-0.2 -1,-0.2 -0.993 77.5-168.2-126.2 122.2 6.6 14.9 11.9 4 4 A I E -A 15 0A 48 11,-2.8 11,-3.0 -2,-0.5 2,-0.5 -0.934 9.7-148.8-115.6 133.5 5.8 12.2 9.4 5 5 A L E -A 14 0A 118 -2,-0.4 9,-0.2 9,-0.2 7,-0.0 -0.875 7.0-161.6-103.0 128.8 6.9 8.6 9.6 6 6 A F E -A 13 0A 51 7,-2.9 7,-2.5 -2,-0.5 -2,-0.0 -0.898 11.5-145.3-112.4 103.7 7.4 6.6 6.4 7 7 A P + 0 0 121 0, 0.0 2,-0.3 0, 0.0 5,-0.1 -0.373 28.3 177.7 -62.9 145.7 7.4 2.8 6.8 8 8 A S > - 0 0 55 1,-0.1 3,-1.8 -2,-0.0 4,-0.1 -0.991 45.3-131.6-155.6 145.5 9.9 1.2 4.4 9 9 A K T 3 S+ 0 0 223 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.631 116.1 49.7 -69.1 -12.1 11.3 -2.2 3.4 10 10 A N T 3 S- 0 0 103 1,-0.3 -1,-0.3 54,-0.0 58,-0.1 0.246 135.3 -62.9-108.5 11.1 14.7 -0.5 3.7 11 11 A G < - 0 0 14 -3,-1.8 -1,-0.3 58,-0.1 58,-0.2 0.090 63.5 -75.7 114.6 133.7 14.1 1.0 7.1 12 12 A A - 0 0 37 56,-0.2 58,-2.9 -4,-0.1 57,-0.7 -0.224 42.4-141.6 -59.4 144.6 11.6 3.6 8.3 13 13 A V E -AB 6 68A 21 -7,-2.5 -7,-2.9 55,-0.2 2,-0.7 -0.938 3.1-149.8-112.3 128.6 12.2 7.2 7.5 14 14 A T E -A 5 0A 79 53,-0.6 2,-0.6 -2,-0.5 -9,-0.2 -0.881 16.4-163.6-100.2 115.5 11.5 10.0 10.0 15 15 A F E -A 4 0A 43 -11,-3.0 -11,-2.8 -2,-0.7 2,-2.1 -0.879 17.1-151.5-108.7 114.9 10.6 13.2 8.1 16 16 A T > + 0 0 45 -2,-0.6 4,-2.4 -13,-0.2 -13,-0.2 -0.521 26.8 171.6 -81.5 74.5 10.7 16.5 9.9 17 17 A H H > S+ 0 0 60 -2,-2.1 4,-0.6 -15,-0.3 -1,-0.2 0.908 74.1 39.3 -50.0 -57.0 7.9 18.0 7.7 18 18 A K H >4 S+ 0 0 115 -16,-2.0 3,-1.6 1,-0.2 4,-0.3 0.936 113.9 54.2 -64.6 -47.6 7.4 21.3 9.7 19 19 A R H >4 S+ 0 0 134 -17,-0.5 3,-2.3 1,-0.3 4,-0.3 0.879 99.6 63.4 -55.4 -39.0 11.1 21.8 10.4 20 20 A H H >X S+ 0 0 54 -4,-2.4 4,-2.4 1,-0.3 3,-1.5 0.765 89.2 67.7 -59.1 -25.2 11.9 21.5 6.7 21 21 A S T << S+ 0 0 76 -3,-1.6 -1,-0.3 -4,-0.6 -2,-0.2 0.623 90.0 64.5 -70.7 -9.4 9.8 24.6 6.0 22 22 A E T <4 S+ 0 0 145 -3,-2.3 -1,-0.3 -4,-0.3 -2,-0.2 0.653 116.1 28.8 -83.1 -15.1 12.5 26.5 7.9 23 23 A F T <4 S+ 0 0 115 -3,-1.5 2,-0.6 -4,-0.3 -2,-0.2 0.613 114.3 64.8-114.9 -25.2 14.9 25.5 5.1 24 24 A V < - 0 0 21 -4,-2.4 -1,-0.2 1,-0.1 5,-0.0 -0.919 62.6-160.6-110.8 115.4 12.6 25.2 2.1 25 25 A R S S+ 0 0 223 -2,-0.6 2,-0.4 -3,-0.1 -1,-0.1 0.859 71.5 47.0 -60.0 -43.2 10.9 28.4 1.0 26 26 A E > - 0 0 121 1,-0.1 3,-1.2 5,-0.0 4,-0.2 -0.869 58.7-151.0-113.4 139.7 8.0 26.9 -1.0 27 27 A C G >> S+ 0 0 81 -2,-0.4 4,-2.4 1,-0.3 3,-2.1 0.871 101.4 67.6 -64.0 -36.1 5.5 24.1 -0.3 28 28 A R G 34 S+ 0 0 138 1,-0.3 -1,-0.3 2,-0.2 6,-0.0 0.666 79.8 76.4 -59.2 -19.5 5.6 23.7 -4.1 29 29 A S G <4 S+ 0 0 77 -3,-1.2 -1,-0.3 1,-0.2 -2,-0.2 0.747 118.7 13.9 -65.8 -19.2 9.2 22.5 -4.0 30 30 A C T <4 S+ 0 0 52 -3,-2.1 -2,-0.2 -4,-0.2 2,-0.2 0.568 123.3 67.3-125.2 -23.2 7.8 19.2 -2.7 31 31 A H S < S- 0 0 35 -4,-2.4 2,-0.1 1,-0.1 6,-0.1 -0.549 74.4-115.4-105.5 166.8 4.1 19.4 -3.4 32 32 A E - 0 0 119 2,-0.5 -1,-0.1 -2,-0.2 -2,-0.1 -0.259 65.2 -71.5 -80.7 178.7 1.7 19.5 -6.3 33 33 A K S S+ 0 0 171 1,-0.1 -5,-0.1 -2,-0.1 -2,-0.1 0.852 130.5 48.6 -42.6 -45.3 -0.3 22.8 -6.8 34 34 A T S S- 0 0 116 -6,-0.0 -2,-0.5 -7,-0.0 -1,-0.1 -0.884 94.2-125.7-102.3 120.4 -2.4 21.9 -3.7 35 35 A P + 0 0 75 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 -0.410 65.1 88.0 -63.9 135.3 -0.4 20.8 -0.6 36 36 A G S S- 0 0 40 -2,-0.1 -4,-0.2 -4,-0.1 -2,-0.0 -0.978 79.5 -10.6 166.5-164.7 -1.5 17.4 0.7 37 37 A K - 0 0 214 -2,-0.3 2,-0.7 1,-0.1 -6,-0.0 -0.309 66.1-128.1 -58.4 140.3 -0.9 13.7 0.3 38 38 A I > - 0 0 30 1,-0.1 3,-2.0 -7,-0.1 -1,-0.1 -0.853 10.3-151.3 -99.9 112.6 1.3 13.0 -2.8 39 39 A R T 3 S+ 0 0 253 -2,-0.7 -1,-0.1 1,-0.3 -2,-0.0 0.822 94.3 38.2 -48.1 -45.8 -0.3 10.4 -5.0 40 40 A N T 3 S+ 0 0 108 2,-0.1 5,-0.5 4,-0.0 -1,-0.3 0.055 81.8 144.7 -99.8 26.9 2.9 9.0 -6.5 41 41 A F < + 0 0 78 -3,-2.0 2,-0.3 4,-0.1 3,-0.1 -0.405 30.2 92.5 -64.5 139.2 4.9 9.2 -3.2 42 42 A G S > S- 0 0 29 1,-0.1 4,-2.8 -2,-0.1 5,-0.2 -0.974 88.5 -37.8 165.8-164.9 7.3 6.3 -3.0 43 43 A K H > S+ 0 0 129 -2,-0.3 4,-3.0 1,-0.2 5,-0.3 0.915 130.5 44.2 -51.3 -56.0 10.9 5.3 -3.7 44 44 A D H > S+ 0 0 123 2,-0.2 4,-1.5 1,-0.2 5,-0.2 0.931 116.9 44.5 -59.3 -50.0 11.3 7.1 -7.0 45 45 A Y H > S+ 0 0 40 -5,-0.5 4,-2.7 1,-0.2 5,-0.3 0.930 117.3 47.0 -60.4 -45.1 9.7 10.3 -5.9 46 46 A A H X>S+ 0 0 17 -4,-2.8 4,-1.7 1,-0.2 5,-1.4 0.896 110.5 48.6 -66.2 -43.9 11.6 10.3 -2.6 47 47 A H H <5S+ 0 0 92 -4,-3.0 5,-0.5 -5,-0.2 -1,-0.2 0.808 116.9 44.4 -69.4 -26.3 15.1 9.5 -4.0 48 48 A K H <5S+ 0 0 162 -4,-1.5 -2,-0.2 -5,-0.3 -1,-0.2 0.924 127.6 26.3 -80.0 -48.0 14.6 12.2 -6.6 49 49AA T H X5S+ 0 0 41 -4,-2.7 4,-1.9 -5,-0.2 5,-0.2 0.948 128.8 35.8 -81.9 -54.6 13.2 14.9 -4.3 50 51 A C H X5S+ 0 0 45 -4,-1.7 4,-1.7 -5,-0.3 -3,-0.2 0.985 128.5 33.0 -64.9 -62.1 14.5 14.1 -0.8 51 52 A K H > S+ 0 0 32 -5,-0.5 4,-2.2 -6,-0.3 -1,-0.2 0.920 106.7 44.3 -57.5 -49.3 18.3 15.2 -4.6 53 54 A C H X S+ 0 0 44 -4,-1.9 4,-2.6 1,-0.2 6,-0.3 0.920 112.0 53.2 -63.8 -42.2 17.8 18.4 -2.6 54 55 A H H X>S+ 0 0 27 -4,-1.7 4,-1.5 -5,-0.2 5,-0.7 0.892 109.7 50.6 -58.4 -39.4 20.2 17.1 0.1 55 56 A E H <5S+ 0 0 118 -4,-2.3 -2,-0.2 2,-0.2 -1,-0.2 0.938 112.9 43.1 -65.0 -48.6 22.8 16.5 -2.7 56 57 A V H <5S+ 0 0 119 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.864 120.0 42.0 -67.7 -36.6 22.5 19.9 -4.3 57 58 A R H <5S- 0 0 142 -4,-2.6 -1,-0.2 2,-0.2 -2,-0.2 0.660 99.5-132.4 -85.9 -16.5 22.5 21.8 -1.0 58 59 A G T <5S+ 0 0 70 -4,-1.5 2,-0.3 -5,-0.3 -3,-0.2 0.683 76.0 97.5 73.4 16.4 25.2 19.7 0.7 59 60 A A < + 0 0 65 -5,-0.7 -1,-0.3 -6,-0.3 -2,-0.2 -0.979 59.7 40.8-135.7 147.2 23.0 19.4 3.8 60 61 A G S S- 0 0 47 -2,-0.3 2,-0.2 -3,-0.1 7,-0.1 -0.035 97.1 -54.3 96.0 155.1 20.7 16.6 4.8 61 62 A P + 0 0 43 0, 0.0 -7,-0.2 0, 0.0 -6,-0.1 -0.421 46.1 163.1 -73.1 138.1 21.4 12.8 4.5 62 63 A T + 0 0 50 -2,-0.2 2,-0.3 -8,-0.1 5,-0.1 0.512 55.1 94.2-120.3 -21.9 22.4 11.2 1.2 63 64 A K S >> S- 0 0 122 1,-0.1 3,-1.6 2,-0.0 4,-0.6 -0.584 83.1-122.7 -76.0 133.7 23.8 8.0 2.7 64 65 A C H >> S+ 0 0 94 -2,-0.3 4,-3.0 1,-0.3 3,-1.4 0.856 106.8 43.5 -39.6 -61.0 21.1 5.2 2.8 65 66 A K H 34 S+ 0 0 147 1,-0.3 -1,-0.3 2,-0.2 -2,-0.0 0.569 103.5 66.2 -69.5 -11.2 21.2 4.5 6.5 66 67 A L H <4 S+ 0 0 93 -3,-1.6 -1,-0.3 1,-0.1 -2,-0.2 0.588 117.1 26.3 -86.4 -10.6 21.2 8.1 7.5 67 68 A C H << S+ 0 0 37 -3,-1.4 2,-1.7 -4,-0.6 -53,-0.6 0.685 118.5 57.8-114.0 -44.0 17.8 8.6 6.1 68 69 A H B < +B 13 0A 33 -4,-3.0 -55,-0.2 -5,-0.3 -56,-0.2 -0.647 68.4 146.0 -87.7 78.0 16.5 5.0 6.4 69 70 A T 0 0 88 -2,-1.7 -1,-0.2 -57,-0.7 -56,-0.2 0.599 360.0 360.0 -92.8 -15.3 17.1 5.0 10.2 70 71 A G 0 0 98 -58,-2.9 -3,-0.0 -3,-0.2 -56,-0.0 -0.065 360.0 360.0 -66.5 360.0 14.2 2.9 11.3