==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 09-JUL-01 1H7M . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L30E; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS CELER; . AUTHOR Y.W.CHEN,K.B.WONG . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5414.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 71.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 11.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 34.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A S 0 0 160 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 142.4 31.0 26.7 12.3 2 1 A V - 0 0 56 94,-0.1 2,-0.6 4,-0.0 92,-0.0 -0.694 360.0-157.9 -84.4 119.4 28.9 24.2 10.3 3 2 A D > - 0 0 93 -2,-0.6 4,-2.4 1,-0.2 5,-0.3 -0.797 7.1-152.4 -95.2 119.5 26.6 21.8 12.1 4 3 A F H > S+ 0 0 24 -2,-0.6 4,-2.7 1,-0.2 5,-0.2 0.895 91.4 47.5 -58.6 -51.0 25.8 18.7 10.0 5 4 A A H > S+ 0 0 24 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.913 114.1 47.1 -58.1 -47.5 22.4 17.8 11.4 6 5 A F H > S+ 0 0 102 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.902 114.7 45.7 -63.3 -43.9 21.1 21.4 11.2 7 6 A E H X S+ 0 0 4 -4,-2.4 4,-2.7 1,-0.2 87,-0.3 0.893 111.0 52.3 -73.0 -36.3 22.3 22.0 7.6 8 7 A L H X S+ 0 0 0 -4,-2.7 4,-2.7 -5,-0.3 -1,-0.2 0.916 110.4 47.6 -63.7 -44.2 21.0 18.6 6.3 9 8 A R H X S+ 0 0 120 -4,-1.9 4,-2.7 -5,-0.2 5,-0.2 0.913 111.9 51.6 -64.3 -38.8 17.5 19.3 7.7 10 9 A K H X S+ 0 0 71 -4,-1.9 4,-2.0 1,-0.2 81,-0.4 0.932 110.4 47.4 -63.6 -43.0 17.6 22.7 6.2 11 10 A A H X S+ 0 0 0 -4,-2.7 4,-2.1 2,-0.2 -1,-0.2 0.876 113.7 49.0 -58.2 -47.3 18.5 21.3 2.8 12 11 A Q H < S+ 0 0 57 -4,-2.7 5,-0.3 1,-0.2 -2,-0.2 0.944 118.4 37.0 -60.4 -47.3 15.8 18.7 3.1 13 12 A D H < S+ 0 0 129 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.666 132.4 25.8 -84.3 -18.1 13.0 21.2 4.1 14 13 A T H < S+ 0 0 68 -4,-2.0 -3,-0.2 -5,-0.2 -2,-0.2 0.539 125.3 27.5-120.1 -11.5 14.1 24.1 1.9 15 14 A G S < S- 0 0 25 -4,-2.1 2,-0.4 -5,-0.3 -4,-0.1 -0.110 93.0 -80.5-121.7-139.5 16.1 22.6 -1.1 16 15 A K E +A 88 0A 105 72,-2.7 72,-2.2 -2,-0.1 71,-2.2 -0.936 42.1 168.3-142.4 119.1 15.9 19.3 -2.8 17 16 A I E -A 86 0A 26 -2,-0.4 2,-0.4 -5,-0.3 69,-0.2 -0.923 18.3-153.0-125.3 149.0 17.5 16.0 -1.7 18 17 A V E -A 85 0A 19 67,-2.2 67,-3.2 -2,-0.3 2,-0.3 -0.991 15.0-143.4-122.7 136.4 16.9 12.6 -3.0 19 18 A M E +A 84 0A 40 -2,-0.4 65,-0.2 65,-0.2 4,-0.2 -0.711 49.4 60.2-107.9 144.2 17.4 9.6 -0.8 20 19 A G S > S- 0 0 26 63,-2.9 4,-2.2 -2,-0.3 5,-0.2 -0.016 71.2-106.9 121.0 145.8 18.7 6.2 -1.7 21 20 A A H > S+ 0 0 21 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.941 115.5 49.9 -63.1 -49.1 21.8 4.5 -3.0 22 21 A R H > S+ 0 0 104 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.937 114.8 43.7 -62.1 -43.0 20.3 3.7 -6.5 23 22 A K H > S+ 0 0 127 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.890 112.7 52.2 -72.4 -34.0 19.1 7.2 -7.0 24 23 A S H X S+ 0 0 0 -4,-2.2 4,-2.3 2,-0.2 -1,-0.2 0.877 110.2 48.5 -61.4 -40.5 22.2 8.8 -5.7 25 24 A I H X S+ 0 0 28 -4,-2.5 4,-2.3 1,-0.2 -2,-0.2 0.908 111.5 50.7 -68.7 -35.8 24.3 6.6 -8.1 26 25 A Q H X S+ 0 0 99 -4,-2.1 4,-1.6 -5,-0.2 -2,-0.2 0.920 109.9 49.4 -68.9 -40.8 21.9 7.7 -10.9 27 26 A Y H <>S+ 0 0 67 -4,-2.4 5,-2.5 2,-0.2 4,-0.5 0.863 109.0 53.1 -64.4 -36.9 22.3 11.3 -10.0 28 27 A A H ><5S+ 0 0 0 -4,-2.3 3,-1.3 1,-0.2 -2,-0.2 0.945 106.6 51.8 -63.9 -45.3 26.1 10.9 -10.0 29 28 A K H 3<5S+ 0 0 92 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.841 113.4 45.3 -56.1 -41.3 26.2 9.4 -13.5 30 29 A M T 3<5S- 0 0 129 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.444 110.3-118.7 -80.6 -5.4 24.1 12.3 -14.8 31 30 A G T < 5S+ 0 0 45 -3,-1.3 -3,-0.2 -4,-0.5 -2,-0.1 0.766 70.5 141.0 69.8 22.8 26.1 15.0 -13.0 32 31 A G < + 0 0 26 -5,-2.5 2,-0.3 -6,-0.2 -4,-0.2 0.075 42.6 58.8 -90.8 25.4 22.9 15.9 -11.3 33 32 A A - 0 0 10 -6,-0.3 54,-0.3 -5,-0.1 3,-0.1 -0.979 58.3-147.6-150.3 155.1 23.8 16.7 -7.6 34 33 A K S S+ 0 0 133 52,-3.0 2,-0.3 1,-0.3 53,-0.2 0.571 88.2 6.1 -97.2 -17.2 26.0 19.2 -5.9 35 34 A L E -B 86 0A 5 51,-1.0 51,-3.6 24,-0.2 2,-0.4 -0.958 60.6-151.9-161.3 141.9 26.9 16.8 -3.0 36 35 A I E -Bc 85 61A 0 24,-2.2 26,-3.1 -2,-0.3 2,-0.4 -0.992 11.8-158.4-117.9 142.1 26.3 13.2 -2.1 37 36 A I E -Bc 84 62A 0 47,-2.4 47,-2.5 -2,-0.4 2,-0.4 -0.932 8.7-172.6-119.5 132.6 26.2 12.0 1.5 38 37 A V E -Bc 83 63A 1 24,-2.3 26,-2.6 -2,-0.4 45,-0.3 -0.974 24.0-117.1-125.1 143.7 26.8 8.4 2.5 39 38 A A E > - c 0 64A 0 43,-2.7 3,-1.6 -2,-0.4 28,-0.2 -0.346 25.9-118.6 -73.9 151.8 26.5 6.7 5.9 40 39 A R T 3 S+ 0 0 46 26,-2.2 27,-0.2 24,-1.1 -1,-0.1 0.832 115.4 42.7 -60.5 -34.1 29.5 5.3 7.6 41 40 A N T 3 S+ 0 0 87 25,-0.6 -1,-0.3 2,-0.0 2,-0.1 0.095 80.6 133.8-103.7 22.7 28.0 1.8 7.5 42 41 A A S < S- 0 0 4 -3,-1.6 5,-0.1 40,-0.2 -4,-0.0 -0.455 73.8 -86.5 -60.4 145.8 26.6 2.0 4.0 43 42 A R >> - 0 0 146 1,-0.1 4,-2.4 -2,-0.1 3,-0.6 -0.146 36.4-119.1 -52.9 137.4 27.5 -1.2 2.1 44 43 A P H 3> S+ 0 0 87 0, 0.0 4,-2.7 0, 0.0 5,-0.2 0.813 114.1 56.3 -52.6 -30.0 30.9 -1.1 0.5 45 44 A D H 3> S+ 0 0 66 2,-0.2 4,-2.7 1,-0.2 5,-0.3 0.901 108.0 48.8 -67.6 -37.8 29.5 -1.5 -3.0 46 45 A I H <> S+ 0 0 4 -3,-0.6 4,-2.4 2,-0.2 5,-0.3 0.942 114.5 45.8 -63.6 -47.5 27.3 1.6 -2.4 47 46 A K H X S+ 0 0 44 -4,-2.4 4,-2.7 1,-0.2 -2,-0.2 0.952 118.0 41.4 -56.1 -53.5 30.3 3.6 -1.1 48 47 A E H X S+ 0 0 122 -4,-2.7 4,-2.3 -5,-0.2 -1,-0.2 0.862 115.5 48.8 -66.8 -35.9 32.6 2.5 -3.9 49 48 A D H X S+ 0 0 69 -4,-2.7 4,-1.9 -5,-0.2 5,-0.2 0.920 113.9 46.5 -72.7 -41.6 30.0 2.8 -6.7 50 49 A I H X S+ 0 0 0 -4,-2.4 4,-2.7 -5,-0.3 5,-0.3 0.925 114.0 48.5 -66.2 -45.4 28.9 6.2 -5.6 51 50 A E H X S+ 0 0 87 -4,-2.7 4,-2.5 -5,-0.3 5,-0.3 0.878 106.9 57.7 -61.8 -40.8 32.5 7.3 -5.2 52 51 A Y H X S+ 0 0 140 -4,-2.3 4,-1.6 1,-0.2 -1,-0.2 0.945 117.9 30.0 -52.0 -57.8 33.4 5.9 -8.7 53 52 A Y H X S+ 0 0 76 -4,-1.9 4,-2.6 2,-0.2 -2,-0.2 0.839 117.1 55.1 -75.6 -37.3 30.8 8.0 -10.5 54 53 A A H X>S+ 0 0 0 -4,-2.7 5,-2.7 -5,-0.2 4,-0.8 0.918 109.1 50.6 -61.5 -43.6 30.7 11.1 -8.2 55 54 A R H ><5S+ 0 0 197 -4,-2.5 3,-1.2 -5,-0.3 -2,-0.2 0.966 112.2 45.4 -59.4 -50.8 34.5 11.4 -8.7 56 55 A L H 3<5S+ 0 0 104 -4,-1.6 -1,-0.2 -5,-0.3 -2,-0.2 0.883 116.1 46.8 -58.6 -43.7 34.3 11.2 -12.5 57 56 A S H 3<5S- 0 0 49 -4,-2.6 -1,-0.3 2,-0.1 -2,-0.2 0.471 114.1-116.4 -73.9 -6.4 31.3 13.7 -12.5 58 57 A G T <<5 + 0 0 64 -3,-1.2 -3,-0.2 -4,-0.8 -2,-0.1 0.874 65.7 143.5 72.8 33.2 33.1 16.1 -10.1 59 58 A I < - 0 0 12 -5,-2.7 -1,-0.2 -6,-0.1 -24,-0.2 -0.954 48.6-127.2-109.6 120.5 30.5 15.7 -7.2 60 59 A P - 0 0 82 0, 0.0 -24,-2.2 0, 0.0 2,-0.5 -0.333 18.5-147.2 -65.3 147.3 32.0 15.8 -3.7 61 60 A V E -c 36 0A 50 -26,-0.2 2,-0.5 -24,-0.0 -24,-0.2 -0.981 9.4-162.2-116.4 134.7 31.1 13.0 -1.4 62 61 A Y E -c 37 0A 67 -26,-3.1 -24,-2.3 -2,-0.5 2,-0.7 -0.944 13.2-137.8-118.8 128.5 30.7 13.4 2.3 63 62 A E E -c 38 0A 74 -2,-0.5 2,-0.4 -26,-0.2 -24,-0.2 -0.765 12.1-146.2 -83.6 114.9 30.8 10.7 4.8 64 63 A F E -c 39 0A 28 -26,-2.6 2,-2.1 -2,-0.7 -24,-1.1 -0.623 15.6-137.8 -77.2 121.5 28.2 11.0 7.6 65 64 A E S S+ 0 0 136 -2,-0.4 2,-0.3 -26,-0.1 -1,-0.1 -0.509 75.9 67.8 -86.9 72.3 29.8 9.6 10.7 66 65 A G S S- 0 0 10 -2,-2.1 -26,-2.2 0, 0.0 -25,-0.6 -0.912 89.2 -78.8-167.5 179.4 26.8 7.7 11.9 67 66 A T > - 0 0 41 -2,-0.3 4,-2.5 -28,-0.2 5,-0.1 -0.341 36.4-110.1 -91.5 170.0 24.7 4.8 10.7 68 67 A S H > S+ 0 0 13 1,-0.2 4,-2.0 2,-0.2 13,-1.9 0.785 122.0 54.9 -67.4 -30.4 22.1 4.5 8.0 69 68 A V H > S+ 0 0 85 11,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.951 110.3 45.9 -62.6 -46.8 19.5 4.1 10.7 70 69 A E H > S+ 0 0 102 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.889 110.6 54.0 -62.2 -39.3 20.8 7.4 12.3 71 70 A L H X S+ 0 0 0 -4,-2.5 4,-1.6 1,-0.2 -1,-0.2 0.924 107.3 50.4 -64.2 -39.5 20.8 9.1 8.9 72 71 A G H <>S+ 0 0 0 -4,-2.0 5,-3.1 1,-0.2 -1,-0.2 0.917 110.3 50.8 -63.2 -41.9 17.1 8.1 8.4 73 72 A T H ><5S+ 0 0 99 -4,-1.9 3,-1.4 1,-0.3 -1,-0.2 0.866 106.1 53.9 -65.2 -36.9 16.2 9.5 11.8 74 73 A L H 3<5S+ 0 0 27 -4,-2.2 -1,-0.3 1,-0.3 -2,-0.2 0.901 111.0 46.9 -62.2 -39.3 17.9 12.7 11.1 75 74 A L T 3<5S- 0 0 5 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.189 117.2-112.6 -87.9 13.7 15.8 12.9 8.0 76 75 A G T < 5S+ 0 0 70 -3,-1.4 -3,-0.2 1,-0.2 -4,-0.1 0.664 72.7 136.2 62.7 20.4 12.5 12.0 9.8 77 76 A R < - 0 0 28 -5,-3.1 -1,-0.2 -6,-0.2 -2,-0.1 -0.816 55.3-143.4-103.5 143.5 12.3 8.6 8.0 78 77 A P S S+ 0 0 142 0, 0.0 2,-0.3 0, 0.0 -5,-0.1 0.675 82.4 63.4 -70.5 -23.1 11.4 5.2 9.5 79 78 A H S S- 0 0 111 1,-0.1 -2,-0.1 -7,-0.1 0, 0.0 -0.710 96.2 -91.6-103.6 160.0 13.8 3.2 7.2 80 79 A T - 0 0 69 -2,-0.3 2,-0.4 -8,-0.1 -11,-0.2 -0.213 31.4-154.0 -59.7 154.7 17.5 3.4 7.0 81 80 A V - 0 0 5 -13,-1.9 -10,-0.2 1,-0.1 -9,-0.1 -0.939 13.0-179.6-132.0 107.8 19.0 5.8 4.4 82 81 A S - 0 0 30 -2,-0.4 -43,-2.7 1,-0.2 2,-0.3 0.718 69.1 -0.1 -83.5 -17.0 22.4 4.7 3.3 83 82 A A E - B 0 38A 0 -45,-0.3 -63,-2.9 -15,-0.1 2,-0.3 -0.970 61.3-170.5-163.2 149.9 23.2 7.6 0.9 84 83 A L E -AB 19 37A 0 -47,-2.5 -47,-2.4 -2,-0.3 2,-0.5 -0.992 17.6-132.6-145.0 158.5 21.3 10.7 -0.3 85 84 A A E -AB 18 36A 0 -67,-3.2 -67,-2.2 -2,-0.3 2,-1.0 -0.910 9.3-144.9-113.7 131.0 22.0 13.3 -3.1 86 85 A V E +AB 17 35A 0 -51,-3.6 -52,-3.0 -2,-0.5 -51,-1.0 -0.834 26.2 168.2 -91.6 106.8 21.8 17.0 -2.5 87 86 A V E S+ 0 0 40 -71,-2.2 -70,-0.2 -2,-1.0 -1,-0.2 0.901 76.3 11.1 -82.4 -39.9 20.3 18.4 -5.8 88 87 A D E -A 16 0A 82 -72,-2.2 -72,-2.7 -3,-0.2 -1,-0.3 -0.988 62.6-154.4-141.9 118.7 19.7 21.8 -4.4 89 88 A P > - 0 0 29 0, 0.0 3,-1.9 0, 0.0 5,-0.3 0.615 30.5-169.1 -69.1 -15.1 21.0 23.0 -1.0 90 89 A G T 3 - 0 0 24 1,-0.3 -75,-0.2 -76,-0.1 -79,-0.1 -0.334 66.7 -16.8 67.0-132.5 18.1 25.5 -0.7 91 90 A E T 3 S+ 0 0 154 -81,-0.4 -1,-0.3 -3,-0.1 -80,-0.1 0.591 117.0 102.5 -84.4 -4.8 18.7 27.9 2.2 92 91 A S < - 0 0 13 -3,-1.9 3,-0.2 -82,-0.2 -85,-0.1 -0.270 68.3-139.7 -83.8 164.5 21.4 25.6 3.8 93 92 A R > + 0 0 138 1,-0.1 3,-2.3 2,-0.1 4,-0.3 -0.105 61.0 128.2 -97.8 24.4 25.2 25.8 3.9 94 93 A I G > + 0 0 0 -87,-0.3 3,-2.3 1,-0.3 -1,-0.1 0.862 63.4 65.5 -57.7 -27.8 25.4 22.0 3.4 95 94 A L G 3 S+ 0 0 80 1,-0.3 -1,-0.3 -3,-0.2 -2,-0.1 0.712 84.2 74.4 -68.8 -14.9 27.8 22.4 0.5 96 95 A A G < 0 0 69 -3,-2.3 -1,-0.3 1,-0.2 -2,-0.2 0.643 360.0 360.0 -70.0 -9.9 30.3 23.8 3.0 97 96 A L < 0 0 71 -3,-2.3 -1,-0.2 -4,-0.3 -2,-0.2 0.943 360.0 360.0 -61.6 360.0 30.8 20.3 4.2