==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 01-JUN-06 2H7A . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN YCGL; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR O.M.MINAILIUC,O.VAVELYUK,I.EKIEL,M.-NI.HUNG,M.CYGLER,S.GANDH . 110 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9981.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 43.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 16.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 140 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 99.2 2.9 -2.8 -12.7 2 2 A S - 0 0 110 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.411 360.0 -65.8-138.0-144.7 6.1 -4.6 -13.6 3 3 A M + 0 0 155 1,-0.2 0, 0.0 -2,-0.1 0, 0.0 -0.922 33.0 179.5-125.2 110.7 9.0 -6.3 -11.9 4 4 A P S S- 0 0 122 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.902 71.9 -28.3 -73.3 -43.5 11.4 -4.2 -9.8 5 5 A K - 0 0 180 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.910 46.7-138.4-173.6 144.9 13.7 -7.1 -8.8 6 6 A P + 0 0 123 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.948 32.9 174.2 -73.2 -89.6 13.6 -10.8 -8.2 7 7 A G + 0 0 51 2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.883 50.4 25.7 116.0-148.1 15.6 -11.7 -5.1 8 8 A I S S- 0 0 141 -2,-0.3 2,-0.6 1,-0.1 0, 0.0 -0.140 71.5-145.0 -48.6 144.8 15.9 -15.1 -3.4 9 9 A L + 0 0 149 2,-0.0 2,-0.4 -3,-0.0 -1,-0.1 -0.864 35.1 149.8-121.2 101.8 15.3 -17.9 -6.0 10 10 A K - 0 0 116 -2,-0.6 2,-0.7 2,-0.1 -2,-0.0 -0.796 20.0-172.3-133.2 94.6 13.5 -21.0 -4.6 11 11 A S + 0 0 114 -2,-0.4 2,-0.4 64,-0.0 -2,-0.0 -0.746 16.3 165.0 -88.8 114.9 11.3 -22.9 -7.1 12 12 A K - 0 0 175 -2,-0.7 2,-0.1 2,-0.0 -2,-0.1 -0.988 27.2-140.0-133.1 131.8 9.3 -25.6 -5.3 13 13 A S + 0 0 59 -2,-0.4 2,-0.3 46,-0.1 46,-0.1 -0.490 36.2 140.9 -85.1 158.4 6.2 -27.6 -6.6 14 14 A M - 0 0 106 44,-0.2 2,-0.4 -2,-0.1 47,-0.3 -0.914 48.9 -66.0-169.7-163.9 3.2 -28.4 -4.3 15 15 A F - 0 0 36 -2,-0.3 2,-0.3 44,-0.2 44,-0.2 -0.832 43.7-179.6-107.8 145.0 -0.6 -28.6 -4.2 16 16 A C E -A 57 0A 0 41,-1.9 41,-2.4 -2,-0.4 2,-0.5 -0.956 21.3-132.8-139.7 159.3 -3.0 -25.7 -4.5 17 17 A V E -AB 56 31A 0 14,-2.7 14,-1.1 -2,-0.3 2,-0.8 -0.947 11.6-151.1-117.4 127.7 -6.7 -25.1 -4.4 18 18 A I E -AB 55 30A 2 37,-2.2 37,-1.6 -2,-0.5 36,-1.0 -0.819 17.3-167.7 -99.1 108.6 -8.5 -23.0 -7.1 19 19 A Y E -AB 53 29A 30 10,-2.8 10,-0.9 -2,-0.8 2,-0.4 -0.538 9.9-139.5 -90.4 160.4 -11.7 -21.4 -5.6 20 20 A R E -AB 52 28A 95 32,-1.6 32,-1.0 8,-0.2 2,-0.3 -0.940 22.1-108.6-122.1 142.3 -14.4 -19.7 -7.8 21 21 A S E > -A 51 0A 5 6,-2.0 3,-0.6 -2,-0.4 6,-0.1 -0.488 25.0-130.6 -68.3 126.8 -16.3 -16.5 -7.0 22 22 A S T 3 S+ 0 0 50 28,-0.6 2,-0.3 26,-0.5 -1,-0.2 0.882 98.1 7.4 -45.0 -40.9 -19.9 -17.3 -6.1 23 23 A K T 3 S+ 0 0 126 25,-0.4 2,-0.3 24,-0.3 -1,-0.3 -0.710 99.1 101.1-148.1 94.8 -20.9 -14.6 -8.6 24 24 A R S < S- 0 0 142 -3,-0.6 24,-0.0 -2,-0.3 23,-0.0 -0.970 73.9 -93.4-160.7 173.5 -18.4 -12.9 -10.9 25 25 A D S S- 0 0 142 -2,-0.3 -1,-0.2 1,-0.1 61,-0.0 0.994 98.8 -39.1 -60.2 -73.9 -17.0 -13.0 -14.4 26 26 A Q S S+ 0 0 96 61,-0.1 2,-0.4 -3,-0.1 -1,-0.1 -0.232 84.2 151.0-152.1 54.0 -14.1 -15.4 -14.0 27 27 A T + 0 0 5 59,-0.1 -6,-2.0 -6,-0.1 2,-0.4 -0.720 16.2 177.5 -92.3 138.9 -12.4 -14.7 -10.6 28 28 A Y E -BC 20 85A 54 57,-1.9 57,-3.6 -2,-0.4 2,-0.3 -0.999 18.4-143.3-141.6 141.5 -10.6 -17.6 -8.8 29 29 A L E -BC 19 84A 2 -10,-0.9 -10,-2.8 -2,-0.4 2,-0.4 -0.708 13.3-153.0-101.6 154.7 -8.6 -17.7 -5.5 30 30 A Y E +BC 18 83A 1 53,-2.1 53,-2.5 -2,-0.3 2,-0.3 -0.983 18.7 163.6-130.4 137.9 -5.6 -20.0 -5.0 31 31 A V E -BC 17 82A 2 -14,-1.1 -14,-2.7 -2,-0.4 51,-0.2 -0.988 49.0-114.2-147.8 156.9 -4.2 -21.5 -1.7 32 32 A E S S- 0 0 90 49,-0.7 2,-0.3 -2,-0.3 -17,-0.2 0.739 102.6 -1.1 -65.1 -17.5 -1.8 -24.2 -0.7 33 33 A K S S- 0 0 86 48,-0.3 2,-1.8 3,-0.1 3,-0.2 -0.985 83.9 -91.8-161.6 168.2 -4.8 -26.0 0.8 34 34 A K S S+ 0 0 119 -2,-0.3 19,-0.0 1,-0.2 -18,-0.0 -0.363 86.7 107.5 -85.0 60.8 -8.6 -25.6 1.3 35 35 A D S S- 0 0 85 -2,-1.8 2,-0.3 1,-0.3 -1,-0.2 0.840 78.5 -61.7-101.4 -73.0 -8.3 -24.0 4.7 36 36 A D - 0 0 109 -3,-0.2 2,-0.6 0, 0.0 -1,-0.3 -0.989 32.5-112.8-167.4 172.6 -9.1 -20.3 4.7 37 37 A F + 0 0 24 -2,-0.3 45,-0.1 1,-0.1 44,-0.0 -0.879 45.2 144.4-122.1 100.8 -8.2 -16.8 3.2 38 38 A S + 0 0 92 -2,-0.6 -1,-0.1 1,-0.1 44,-0.0 0.527 69.1 59.6-111.5 -10.3 -6.9 -14.4 5.9 39 39 A R S S+ 0 0 159 2,-0.1 -2,-0.1 3,-0.0 -1,-0.1 0.722 79.5 101.7 -91.0 -21.1 -4.3 -12.6 3.8 40 40 A V S S- 0 0 25 1,-0.1 2,-0.2 2,-0.1 -3,-0.0 -0.425 81.8-113.9 -65.2 134.9 -6.8 -11.3 1.2 41 41 A P >> - 0 0 57 0, 0.0 4,-2.4 0, 0.0 3,-1.1 -0.461 14.3-129.3 -70.1 135.0 -7.7 -7.6 1.8 42 42 A E H 3> S+ 0 0 173 1,-0.3 4,-0.6 2,-0.2 -2,-0.1 0.698 107.2 66.4 -59.8 -13.7 -11.3 -7.1 2.8 43 43 A E H 34 S+ 0 0 154 2,-0.1 -1,-0.3 1,-0.1 4,-0.2 0.894 111.6 29.5 -76.1 -37.7 -11.4 -4.5 -0.0 44 44 A L H X> S+ 0 0 86 -3,-1.1 3,-2.7 2,-0.2 4,-1.0 0.910 111.7 62.4 -87.2 -47.9 -10.9 -7.1 -2.8 45 45 A M H 3X S+ 0 0 39 -4,-2.4 4,-3.1 1,-0.3 -3,-0.2 0.813 86.0 81.0 -48.7 -25.9 -12.6 -10.1 -1.1 46 46 A K H 3< S+ 0 0 178 -4,-0.6 -1,-0.3 -5,-0.3 -2,-0.2 0.890 95.0 44.4 -49.9 -37.3 -15.7 -7.9 -1.2 47 47 A G H <4 S+ 0 0 15 -3,-2.7 -24,-0.3 -4,-0.2 -1,-0.2 0.917 118.7 42.4 -75.3 -41.4 -16.1 -9.0 -4.9 48 48 A F H < S+ 0 0 5 -4,-1.0 2,-0.9 1,-0.2 -26,-0.5 0.991 77.2 163.0 -68.5 -59.3 -15.4 -12.6 -4.1 49 49 A G < + 0 0 26 -4,-3.1 -1,-0.2 -28,-0.1 -2,-0.1 -0.635 66.9 17.2 78.6-107.5 -17.4 -12.9 -0.9 50 50 A Q S S- 0 0 135 -2,-0.9 -28,-0.6 0, 0.0 -30,-0.1 -0.848 80.2-154.6-104.8 105.6 -17.9 -16.7 -0.4 51 51 A P E -A 21 0A 32 0, 0.0 2,-0.3 0, 0.0 -30,-0.2 -0.279 10.2-158.6 -71.6 159.5 -15.4 -18.7 -2.4 52 52 A Q E -A 20 0A 75 -32,-1.0 -32,-1.6 3,-0.0 2,-1.1 -0.917 25.9-102.9-137.2 164.7 -16.2 -22.3 -3.4 53 53 A L E +A 19 0A 79 -2,-0.3 -34,-0.2 -34,-0.2 3,-0.1 -0.729 54.6 144.2 -91.7 99.0 -14.2 -25.4 -4.4 54 54 A A E S+ 0 0 49 -2,-1.1 2,-0.3 -36,-1.0 -1,-0.2 0.701 70.9 14.2-105.4 -26.1 -14.6 -25.6 -8.2 55 55 A M E -A 18 0A 104 -37,-1.6 -37,-2.2 -3,-0.3 2,-0.5 -0.964 63.0-153.5-152.1 132.4 -11.1 -27.0 -9.2 56 56 A I E -A 17 0A 86 -2,-0.3 -39,-0.2 -39,-0.2 -3,-0.0 -0.901 14.3-140.5-109.8 130.7 -8.3 -28.5 -7.1 57 57 A L E -A 16 0A 5 -41,-2.4 -41,-1.9 -2,-0.5 6,-0.1 -0.787 19.4-142.2 -92.3 119.9 -4.7 -28.3 -8.2 58 58 A P - 0 0 74 0, 0.0 3,-0.3 0, 0.0 -44,-0.2 -0.145 11.3-125.9 -71.2 170.5 -2.7 -31.5 -7.6 59 59 A L S S+ 0 0 103 -44,-0.2 -44,-0.2 1,-0.1 -46,-0.1 -0.420 75.5 106.1-116.9 58.2 0.9 -31.5 -6.5 60 60 A D S S- 0 0 129 -2,-0.2 -1,-0.1 -46,-0.2 -45,-0.1 0.507 92.5-105.6-111.1 -7.6 2.6 -33.8 -9.1 61 61 A G S S+ 0 0 44 -47,-0.3 2,-1.4 -3,-0.3 -2,-0.0 -0.043 99.6 95.1 108.0 -32.7 4.4 -31.1 -11.0 62 62 A R + 0 0 224 2,-0.0 2,-0.5 1,-0.0 -2,-0.1 -0.606 47.0 135.8 -93.0 80.0 2.0 -31.1 -14.0 63 63 A K + 0 0 34 -2,-1.4 2,-0.5 -6,-0.1 7,-0.1 -0.849 18.2 160.1-129.5 99.7 -0.4 -28.3 -13.1 64 64 A K - 0 0 194 -2,-0.5 2,-0.3 6,-0.1 5,-0.1 -0.965 12.3-175.3-122.5 129.6 -1.3 -25.8 -15.9 65 65 A L - 0 0 50 -2,-0.5 5,-0.1 3,-0.3 -2,-0.0 -0.815 25.1-147.4-119.2 161.5 -4.3 -23.6 -15.8 66 66 A V S S+ 0 0 135 -2,-0.3 3,-0.1 3,-0.1 -1,-0.1 0.603 95.0 53.7-101.6 -14.0 -5.8 -21.2 -18.4 67 67 A N S S+ 0 0 59 1,-0.3 2,-0.3 20,-0.0 19,-0.1 0.954 120.3 6.7 -84.5 -60.2 -7.2 -18.6 -15.9 68 68 A A S S- 0 0 4 17,-0.1 2,-0.8 19,-0.1 -3,-0.3 -0.883 80.1-106.0-123.3 156.3 -4.1 -17.8 -13.8 69 69 A D >> - 0 0 95 -2,-0.3 4,-1.1 1,-0.2 3,-1.1 -0.682 21.1-151.1 -83.0 110.2 -0.5 -18.8 -14.1 70 70 A I H 3> S+ 0 0 21 -2,-0.8 4,-1.3 1,-0.3 3,-0.4 0.840 97.4 58.8 -49.1 -31.7 0.3 -21.4 -11.4 71 71 A E H 3> S+ 0 0 111 1,-0.2 4,-0.8 2,-0.2 3,-0.3 0.908 100.0 53.7 -68.2 -38.8 3.9 -20.1 -11.4 72 72 A K H <4 S+ 0 0 92 -3,-1.1 -1,-0.2 1,-0.2 -2,-0.2 0.721 109.3 51.8 -68.7 -15.8 2.8 -16.5 -10.5 73 73 A V H >X S+ 0 0 0 -4,-1.1 4,-2.3 -3,-0.4 3,-1.5 0.757 90.3 76.4 -90.7 -26.2 0.9 -18.1 -7.5 74 74 A K H 3X S+ 0 0 47 -4,-1.3 4,-1.7 -3,-0.3 5,-0.2 0.948 99.0 43.8 -49.3 -53.5 3.9 -20.1 -6.2 75 75 A Q H 3X S+ 0 0 93 -4,-0.8 4,-0.6 1,-0.2 5,-0.3 0.620 112.1 58.1 -69.9 -8.2 5.5 -16.9 -4.7 76 76 A A H <>>S+ 0 0 0 -3,-1.5 5,-3.6 3,-0.2 4,-1.6 0.871 109.8 38.1 -89.3 -40.2 2.0 -16.0 -3.4 77 77 A L H <5S+ 0 0 18 -4,-2.3 -2,-0.2 4,-0.3 -3,-0.1 0.773 117.4 51.7 -81.8 -24.0 1.3 -19.1 -1.3 78 78 A T H <5S+ 0 0 88 -4,-1.7 -1,-0.2 -5,-0.4 -3,-0.2 0.839 124.1 26.9 -80.7 -31.6 5.0 -19.3 -0.1 79 79 A E H <5S+ 0 0 132 -4,-0.6 -2,-0.2 -5,-0.2 -3,-0.2 0.886 147.1 4.4 -95.3 -51.6 5.1 -15.7 1.0 80 80 A Q T <5S- 0 0 94 -4,-1.6 -3,-0.3 -5,-0.3 -4,-0.1 0.872 87.9-127.0 -98.5 -59.6 1.4 -14.9 1.9 81 81 A G S