==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-OCT-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 26-SEP-12 4HAE . COMPND 2 MOLECULE: CHROMODOMAIN Y-LIKE PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.QIN,L.DOMBROVSKI,W.TEMPEL,A.DONG,C.XU,C.BOUNTRA,C.H.ARROWS . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5412.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 34.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A E 0 0 102 0, 0.0 53,-0.2 0, 0.0 16,-0.1 0.000 360.0 360.0 360.0 9.7 -7.3 30.0 -13.2 2 -4 A N + 0 0 86 1,-0.2 52,-2.7 51,-0.1 2,-0.3 0.965 360.0 178.5 41.3 64.2 -3.5 30.8 -12.8 3 -3 A L E -A 53 0A 35 12,-0.4 12,-2.2 50,-0.2 2,-0.3 -0.728 12.3-178.6 -99.0 141.9 -3.5 28.9 -9.5 4 -2 A Y E -AB 52 14A 53 48,-2.6 48,-3.8 -2,-0.3 2,-0.4 -0.981 19.2-139.2-140.6 144.2 -0.4 28.5 -7.4 5 -1 A F E -AB 51 13A 16 8,-3.0 8,-2.7 -2,-0.3 2,-0.8 -0.911 16.4-134.9-106.7 134.5 0.3 26.7 -4.1 6 0 A Q E - B 0 12A 79 44,-2.5 6,-0.2 -2,-0.4 5,-0.1 -0.819 31.2-154.3 -92.3 111.5 2.6 28.3 -1.5 7 1 A G > - 0 0 13 4,-2.9 3,-3.4 -2,-0.8 -1,-0.0 -0.212 33.4 -86.0 -88.0 174.7 4.8 25.6 -0.3 8 2 A A T 3 S+ 0 0 122 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.781 129.3 53.6 -50.3 -34.5 6.7 25.0 3.0 9 3 A S T 3 S- 0 0 86 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.549 116.6-113.5 -72.4 -12.4 9.6 27.2 1.6 10 4 A G S < S+ 0 0 36 -3,-3.4 -2,-0.1 1,-0.4 -1,-0.1 0.216 78.3 132.0 87.6 -13.9 7.2 30.1 0.8 11 5 A D - 0 0 103 -5,-0.1 -4,-2.9 1,-0.1 2,-0.4 -0.362 60.1-118.1 -67.3 148.7 8.0 29.3 -2.9 12 6 A L E -B 6 0A 72 -6,-0.2 2,-0.5 -3,-0.1 -6,-0.2 -0.775 22.9-159.1 -96.7 135.7 5.0 29.1 -5.3 13 7 A Y E -B 5 0A 113 -8,-2.7 -8,-3.0 -2,-0.4 2,-0.2 -0.969 23.3-116.5-117.7 129.1 4.2 25.8 -7.1 14 8 A E E -B 4 0A 91 -2,-0.5 22,-1.9 -10,-0.2 2,-0.5 -0.423 22.2-146.4 -71.5 131.2 2.1 25.8 -10.2 15 9 A V E -C 35 0B 9 -12,-2.2 -12,-0.4 20,-0.2 20,-0.2 -0.845 7.7-162.4 -96.3 128.4 -1.2 24.0 -10.0 16 10 A E E - 0 0 113 18,-2.8 2,-0.3 -2,-0.5 19,-0.2 0.936 69.7 -38.3 -72.2 -53.2 -2.5 22.3 -13.2 17 11 A R E -C 34 0B 120 17,-1.2 17,-2.8 -16,-0.1 2,-0.6 -0.984 54.2 -99.4-164.0 166.2 -6.0 22.0 -11.8 18 12 A I E -C 33 0B 52 -2,-0.3 15,-0.2 15,-0.2 3,-0.1 -0.837 31.3-175.2 -87.6 123.7 -8.2 21.3 -8.9 19 13 A V E - 0 0 45 13,-3.4 2,-0.3 -2,-0.6 14,-0.2 0.782 61.5 -19.7 -91.4 -32.2 -9.4 17.7 -9.1 20 14 A D E -C 32 0B 93 12,-0.9 12,-2.2 2,-0.0 2,-0.3 -0.948 55.3-136.1-167.3 173.9 -11.8 17.7 -6.1 21 15 A K E +C 31 0B 106 -2,-0.3 2,-0.3 10,-0.2 10,-0.2 -0.986 21.4 170.4-145.3 144.0 -12.7 19.4 -2.9 22 16 A R E -C 30 0B 110 8,-2.3 8,-2.8 -2,-0.3 2,-0.6 -0.991 34.8-118.5-151.0 157.2 -13.6 18.2 0.6 23 17 A K E -C 29 0B 131 -2,-0.3 6,-0.2 6,-0.2 -2,-0.0 -0.881 40.0-137.5 -92.9 128.1 -14.2 19.4 4.1 24 18 A N > - 0 0 34 4,-3.3 3,-1.9 -2,-0.6 -1,-0.0 -0.203 24.6 -98.8 -82.1 175.1 -11.7 17.8 6.3 25 19 A K T 3 S+ 0 0 221 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.614 124.2 57.9 -73.7 -11.0 -12.2 16.4 9.8 26 20 A K T 3 S- 0 0 137 2,-0.2 -1,-0.3 0, 0.0 3,-0.1 0.478 122.1-108.3 -90.9 -3.8 -10.9 19.6 11.4 27 21 A G S < S+ 0 0 40 -3,-1.9 2,-0.3 1,-0.3 -2,-0.1 0.576 79.8 122.4 95.1 12.6 -13.7 21.4 9.5 28 22 A K - 0 0 82 1,-0.0 -4,-3.3 20,-0.0 -1,-0.3 -0.799 63.6-108.0-112.1 150.7 -11.4 23.2 7.0 29 23 A W E -C 23 0B 100 -2,-0.3 19,-2.2 -6,-0.2 2,-0.3 -0.543 33.8-176.5 -79.8 138.6 -11.6 23.0 3.2 30 24 A E E -CD 22 47B 28 -8,-2.8 -8,-2.3 17,-0.2 2,-0.4 -0.944 12.3-146.8-129.4 152.5 -9.0 21.1 1.2 31 25 A Y E -CD 21 46B 45 15,-2.7 15,-2.8 -2,-0.3 2,-0.7 -0.952 16.9-128.7-118.2 145.2 -8.4 20.6 -2.5 32 26 A L E -CD 20 45B 27 -12,-2.2 -13,-3.4 -2,-0.4 -12,-0.9 -0.808 37.2-150.7 -92.9 118.2 -7.1 17.7 -4.4 33 27 A I E -CD 18 44B 1 11,-2.7 11,-1.2 -2,-0.7 2,-0.7 -0.808 18.9-153.4-106.2 127.1 -4.4 19.2 -6.5 34 28 A R E -C 17 0B 44 -17,-2.8 -18,-2.8 -2,-0.5 -17,-1.2 -0.884 29.7-140.0 -85.3 115.3 -3.1 18.1 -9.9 35 29 A W E > -C 15 0B 39 -2,-0.7 3,-2.1 4,-0.3 -20,-0.2 -0.582 21.4-102.1 -84.2 139.3 0.5 19.4 -9.9 36 30 A K T 3 S+ 0 0 57 -22,-1.9 -1,-0.1 1,-0.3 3,-0.1 -0.374 109.8 16.7 -58.6 126.9 1.9 20.9 -13.1 37 31 A G T 3 S+ 0 0 78 1,-0.3 -1,-0.3 -2,-0.1 2,-0.2 0.342 112.7 93.7 91.3 -4.7 4.2 18.3 -14.7 38 32 A Y < - 0 0 149 -3,-2.1 -1,-0.3 1,-0.1 2,-0.1 -0.717 64.8-127.8-117.3 165.7 2.8 15.4 -12.7 39 33 A G > - 0 0 36 -2,-0.2 3,-1.8 -3,-0.1 -4,-0.3 -0.408 43.6 -82.5-104.5-179.5 0.1 12.8 -13.1 40 34 A S G > S+ 0 0 79 1,-0.3 3,-1.4 2,-0.2 -7,-0.0 0.739 119.7 71.0 -59.4 -23.3 -2.8 11.7 -11.0 41 35 A T G 3 S+ 0 0 125 1,-0.3 -1,-0.3 3,-0.0 -3,-0.0 0.816 100.6 47.1 -63.6 -26.8 -0.6 9.4 -8.9 42 36 A E G < S+ 0 0 101 -3,-1.8 -1,-0.3 -7,-0.1 -2,-0.2 0.297 81.1 128.8 -96.0 6.4 1.0 12.6 -7.3 43 37 A D < - 0 0 29 -3,-1.4 2,-0.3 -4,-0.1 -9,-0.2 -0.403 38.1-173.3 -62.7 136.3 -2.4 14.3 -6.6 44 38 A T E -D 33 0B 53 -11,-1.2 -11,-2.7 -2,-0.1 2,-0.5 -0.976 28.5-115.3-138.3 150.6 -2.5 15.5 -3.0 45 39 A W E -D 32 0B 75 -2,-0.3 -13,-0.2 -13,-0.2 -24,-0.1 -0.741 41.5-177.5 -84.2 124.0 -5.1 17.1 -0.7 46 40 A E E -D 31 0B 44 -15,-2.8 -15,-2.7 -2,-0.5 2,-0.1 -0.930 30.1-100.3-129.8 147.8 -4.0 20.6 0.3 47 41 A P E > -D 30 0B 33 0, 0.0 3,-1.5 0, 0.0 4,-0.3 -0.406 25.9-132.1 -66.5 139.8 -5.4 23.3 2.6 48 42 A E G > S+ 0 0 86 -19,-2.2 3,-1.4 1,-0.3 -18,-0.1 0.778 100.4 69.7 -63.9 -27.0 -7.3 26.1 0.9 49 43 A H G 3 S+ 0 0 123 -20,-0.3 -1,-0.3 1,-0.3 -19,-0.1 0.732 100.3 48.6 -68.5 -17.4 -5.4 28.8 2.8 50 44 A H G < S+ 0 0 73 -3,-1.5 -44,-2.5 2,-0.0 2,-0.5 0.467 88.5 96.7 -95.8 -5.2 -2.2 27.9 0.8 51 45 A L E < -A 5 0A 33 -3,-1.4 2,-0.3 -4,-0.3 -46,-0.2 -0.772 58.5-167.5 -89.3 128.7 -3.8 28.0 -2.6 52 46 A L E -A 4 0A 53 -48,-3.8 -48,-2.6 -2,-0.5 2,-0.5 -0.860 20.7-148.3-117.4 149.3 -3.3 31.3 -4.4 53 47 A H E -A 3 0A 125 -2,-0.3 2,-0.5 -50,-0.2 -50,-0.2 -0.983 20.0-158.6-111.1 120.1 -4.8 32.9 -7.5 54 48 A C + 0 0 42 -52,-2.7 2,-0.3 -2,-0.5 3,-0.0 -0.901 14.2 176.0-104.9 123.5 -2.3 35.1 -9.2 55 49 A E - 0 0 73 -2,-0.5 3,-0.1 1,-0.1 -2,-0.0 -0.886 43.9 -80.4-119.4 155.4 -3.5 37.9 -11.6 56 50 A E - 0 0 172 -2,-0.3 2,-0.2 1,-0.1 -1,-0.1 -0.199 60.6-101.1 -48.3 139.3 -1.7 40.6 -13.5 57 51 A F - 0 0 156 -3,-0.0 2,-0.5 1,-0.0 -1,-0.1 -0.471 33.6-159.7 -70.1 136.1 -1.0 43.5 -11.1 58 52 A I - 0 0 122 -2,-0.2 2,-0.2 -3,-0.1 4,-0.1 -0.984 17.8-129.5-123.9 120.2 -3.4 46.5 -11.4 59 53 A D > - 0 0 89 -2,-0.5 3,-1.0 1,-0.1 -2,-0.0 -0.440 10.4-131.4 -74.1 131.0 -2.1 49.7 -9.9 60 54 A E T 3 S+ 0 0 102 1,-0.3 2,-0.9 -2,-0.2 -1,-0.1 0.904 112.0 44.1 -44.0 -50.0 -4.3 51.6 -7.5 61 55 A F T 3 S+ 0 0 116 3,-0.0 2,-0.4 -3,-0.0 -1,-0.3 -0.544 88.1 138.8 -96.6 63.7 -3.6 54.7 -9.5 62 56 A N < - 0 0 51 -3,-1.0 3,-0.1 -2,-0.9 2,-0.1 -0.900 53.7 -14.7-105.8 137.6 -4.0 53.1 -13.0 63 57 A G S S- 0 0 85 -2,-0.4 3,-0.0 1,-0.2 0, 0.0 -0.327 98.0 -43.0 83.9-154.6 -5.8 54.7 -16.0 64 58 A L S S+ 0 0 154 -2,-0.1 2,-0.3 1,-0.1 -1,-0.2 0.922 112.5 41.9 -88.6 -53.0 -8.2 57.7 -16.3 65 59 A H 0 0 158 1,-0.2 -3,-0.1 -3,-0.1 -1,-0.1 -0.722 360.0 360.0-102.9 152.6 -10.7 57.5 -13.4 66 60 A M 0 0 156 -2,-0.3 -1,-0.2 -5,-0.1 -4,-0.1 0.872 360.0 360.0 -97.3 360.0 -10.1 56.6 -9.7