==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDOCYTOSIS, PROTEIN BINDING 14-JUN-06 2HBP . COMPND 2 MOLECULE: CYTOSKELETON ASSEMBLY CONTROL PROTEIN SLA1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.OVERDUIN,R.K.MAHADEV . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4229.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 62.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 30.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A K 0 0 156 0, 0.0 2,-0.3 0, 0.0 17,-0.1 0.000 360.0 360.0 360.0 133.4 -5.7 -7.7 5.4 2 4 A K - 0 0 158 15,-0.2 2,-0.3 0, 0.0 15,-0.2 -0.955 360.0 -66.6-169.6 154.7 -8.6 -5.4 5.3 3 5 A S S S+ 0 0 62 -2,-0.3 15,-0.3 15,-0.1 2,-0.2 -0.322 73.2 153.5 -57.0 112.6 -9.5 -1.9 4.0 4 6 A R E -A 17 0A 117 13,-2.8 13,-2.8 -2,-0.3 2,-0.8 -0.680 49.8 -70.0-137.0-177.1 -7.4 0.4 6.1 5 7 A L E -A 16 0A 81 11,-0.2 2,-0.3 -2,-0.2 11,-0.3 -0.730 46.7-169.6 -91.2 106.7 -5.7 3.7 6.2 6 8 A W E -A 15 0A 2 9,-4.0 9,-2.1 -2,-0.8 2,-0.4 -0.674 0.6-164.6 -92.1 149.3 -2.7 3.9 3.8 7 9 A V E -A 14 0A 45 -2,-0.3 38,-1.9 7,-0.2 41,-0.2 -0.995 13.6-130.1-135.7 140.0 -0.2 6.7 3.9 8 10 A D B -B 44 0B 3 5,-1.9 3,-0.4 -2,-0.4 36,-0.3 -0.280 37.4 -94.2 -80.8 175.1 2.4 7.8 1.3 9 11 A R S S+ 0 0 83 34,-3.1 35,-0.2 1,-0.2 37,-0.1 0.924 124.5 39.3 -54.2 -51.2 6.1 8.5 2.1 10 12 A S S S- 0 0 88 33,-0.4 -1,-0.2 1,-0.1 34,-0.1 0.650 109.0-119.5 -80.2 -14.8 5.7 12.2 2.5 11 13 A G S S+ 0 0 50 -3,-0.4 -2,-0.1 2,-0.2 3,-0.1 0.789 75.1 128.9 79.6 29.7 2.3 12.0 4.3 12 14 A T + 0 0 115 1,-0.2 2,-0.4 0, 0.0 -3,-0.0 0.839 69.8 28.9 -86.6 -36.9 0.6 13.9 1.6 13 15 A F - 0 0 66 2,-0.0 -5,-1.9 0, 0.0 2,-0.4 -0.980 59.1-173.3-130.0 141.4 -2.2 11.5 1.0 14 16 A K E -A 7 0A 143 -2,-0.4 2,-0.4 -7,-0.2 -7,-0.2 -0.999 14.9-176.3-128.9 131.8 -3.9 9.0 3.2 15 17 A V E -A 6 0A 19 -9,-2.1 -9,-4.0 -2,-0.4 2,-0.6 -0.978 29.7-128.5-134.9 140.9 -6.4 6.5 1.8 16 18 A D E +A 5 0A 52 -2,-0.4 17,-0.4 -11,-0.3 2,-0.3 -0.778 55.1 140.7 -81.2 122.4 -8.8 3.8 3.0 17 19 A A E -A 4 0A 0 -13,-2.8 -13,-2.8 -2,-0.6 2,-0.4 -0.996 46.1-137.8-162.0 155.9 -8.0 0.8 0.8 18 20 A E E -C 30 0C 38 12,-1.6 12,-2.9 -2,-0.3 2,-0.4 -0.942 35.8-111.4-116.3 145.9 -7.6 -2.9 0.6 19 21 A F E +C 29 0C 16 -2,-0.4 10,-0.2 10,-0.2 3,-0.1 -0.616 39.9 163.5 -80.9 129.5 -4.8 -4.5 -1.4 20 22 A I E - 0 0 100 8,-2.5 2,-0.3 -2,-0.4 -1,-0.2 0.771 64.4 -23.7-108.7 -49.5 -5.9 -6.4 -4.5 21 23 A G E -C 28 0C 27 7,-1.2 7,-3.4 2,-0.1 2,-0.5 -0.934 48.3-141.2-168.4 140.9 -2.7 -6.8 -6.5 22 24 A C E +C 27 0C 51 -2,-0.3 2,-0.3 5,-0.3 5,-0.2 -0.929 30.8 163.6-111.1 130.4 0.7 -5.2 -6.9 23 25 A A E > +C 26 0C 44 3,-2.2 3,-2.0 -2,-0.5 -2,-0.1 -0.997 57.4 3.4-151.4 138.0 2.1 -5.0 -10.4 24 26 A K T 3 S- 0 0 206 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.723 130.0 -54.7 61.6 24.6 4.9 -3.1 -12.2 25 27 A G T 3 S+ 0 0 24 1,-0.4 16,-1.8 15,-0.1 17,-0.5 0.491 119.3 104.0 89.6 2.7 5.9 -1.5 -8.9 26 28 A K E < -CD 23 40C 113 -3,-2.0 -3,-2.2 14,-0.3 2,-0.5 -0.789 65.3-129.3-115.0 161.8 2.5 -0.1 -8.2 27 29 A I E -CD 22 39C 0 12,-3.3 12,-2.5 -2,-0.3 2,-0.6 -0.945 10.4-144.9-114.4 120.7 -0.3 -1.3 -5.8 28 30 A H E -CD 21 38C 76 -7,-3.4 -8,-2.5 -2,-0.5 -7,-1.2 -0.760 29.0-171.8 -80.5 123.5 -3.8 -1.8 -7.0 29 31 A L E -CD 19 37C 1 8,-2.5 8,-3.0 -2,-0.6 2,-0.7 -0.941 23.9-153.7-126.3 139.7 -6.1 -0.7 -4.2 30 32 A H E -CD 18 36C 91 -12,-2.9 -12,-1.6 -2,-0.4 6,-0.3 -0.921 25.1-140.8-112.7 103.1 -9.8 -1.0 -3.5 31 33 A K > - 0 0 38 4,-3.3 3,-1.6 -2,-0.7 -14,-0.3 -0.202 16.7-125.3 -59.6 152.6 -10.9 1.7 -1.2 32 34 A A T 3 S+ 0 0 63 1,-0.3 -1,-0.1 -16,-0.2 -15,-0.1 0.642 113.3 69.0 -72.2 -15.2 -13.5 1.0 1.5 33 35 A N T 3 S- 0 0 119 -17,-0.4 -1,-0.3 2,-0.2 3,-0.1 0.593 124.4-106.3 -74.4 -13.3 -15.3 3.9 -0.1 34 36 A G S < S+ 0 0 51 -3,-1.6 2,-0.3 1,-0.3 -2,-0.1 0.537 80.2 126.3 99.3 9.5 -15.8 1.6 -3.1 35 37 A V - 0 0 66 0, 0.0 -4,-3.3 0, 0.0 2,-0.5 -0.781 51.8-141.5-103.0 142.8 -13.2 3.3 -5.4 36 38 A K E +D 30 0C 128 -2,-0.3 -6,-0.2 -6,-0.3 2,-0.2 -0.916 30.1 171.2-105.3 125.2 -10.3 1.4 -7.1 37 39 A I E -D 29 0C 39 -8,-3.0 -8,-2.5 -2,-0.5 2,-0.4 -0.719 31.0-129.4-127.3 172.4 -7.0 3.3 -7.3 38 40 A A E +D 28 0C 68 -2,-0.2 2,-0.5 -10,-0.2 -10,-0.2 -0.941 24.7 179.8-129.9 110.0 -3.4 2.8 -8.2 39 41 A V E -D 27 0C 13 -12,-2.5 -12,-3.3 -2,-0.4 2,-0.3 -0.939 31.1-120.0-114.2 127.0 -0.7 3.9 -5.7 40 42 A A E > -D 26 0C 24 -2,-0.5 3,-1.0 -14,-0.3 -14,-0.3 -0.485 15.5-144.2 -67.6 128.4 3.0 3.4 -6.5 41 43 A A T 3 S+ 0 0 0 -16,-1.8 3,-0.4 -2,-0.3 -15,-0.2 0.594 93.3 60.9 -70.8 -10.2 4.5 1.2 -3.9 42 44 A D T 3 S+ 0 0 90 -17,-0.5 -1,-0.2 1,-0.2 -16,-0.1 0.669 102.4 46.5 -96.2 -19.8 7.8 3.1 -3.9 43 45 A K S < S+ 0 0 85 -3,-1.0 -34,-3.1 21,-0.1 -33,-0.4 0.133 99.4 99.0-104.8 19.6 6.5 6.5 -2.8 44 46 A L B S-B 8 0B 1 -3,-0.4 21,-0.4 -36,-0.3 -36,-0.3 -0.385 81.6 -83.9-101.5 176.4 4.5 4.9 -0.0 45 47 A S > - 0 0 19 -38,-1.9 4,-2.1 -2,-0.1 3,-0.3 -0.583 31.6-122.5 -88.4 147.5 5.1 4.5 3.7 46 48 A N H > S+ 0 0 22 1,-0.2 4,-2.8 -2,-0.2 5,-0.1 0.781 110.8 54.7 -56.9 -35.4 7.2 1.6 5.1 47 49 A E H > S+ 0 0 142 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.922 107.3 48.9 -68.1 -45.6 4.3 0.4 7.3 48 50 A D H > S+ 0 0 15 -3,-0.3 4,-2.3 -41,-0.2 -2,-0.2 0.888 113.7 48.1 -59.2 -40.8 2.0 0.2 4.3 49 51 A L H X S+ 0 0 0 -4,-2.1 4,-3.2 2,-0.2 -2,-0.2 0.932 107.6 54.2 -68.1 -42.9 4.7 -1.7 2.5 50 52 A A H X S+ 0 0 28 -4,-2.8 4,-1.1 1,-0.2 -1,-0.2 0.860 110.6 49.0 -58.8 -35.2 5.3 -4.1 5.4 51 53 A Y H >X S+ 0 0 35 -4,-2.0 4,-1.7 2,-0.2 3,-0.5 0.951 112.4 44.2 -68.8 -50.3 1.6 -4.9 5.3 52 54 A V H 3X S+ 0 0 0 -4,-2.3 4,-2.5 1,-0.3 5,-0.3 0.849 107.8 61.2 -68.9 -31.4 1.4 -5.5 1.6 53 55 A E H 3X S+ 0 0 7 -4,-3.2 4,-3.1 1,-0.2 -1,-0.3 0.890 105.5 48.4 -51.9 -41.0 4.6 -7.6 2.0 54 56 A K H << S+ 0 0 148 -4,-1.1 -2,-0.2 -3,-0.5 -1,-0.2 0.848 110.8 49.3 -75.5 -34.0 2.7 -9.8 4.3 55 57 A I H < S+ 0 0 39 -4,-1.7 -1,-0.2 1,-0.1 -2,-0.2 0.892 124.6 29.5 -66.3 -39.6 -0.3 -10.1 1.9 56 58 A T H < S- 0 0 45 -4,-2.5 -2,-0.2 -5,-0.2 -3,-0.2 0.902 95.4-126.1 -92.1 -46.3 2.0 -11.0 -1.0 57 59 A G S < S+ 0 0 66 -4,-3.1 -3,-0.1 1,-0.4 -4,-0.1 0.285 74.7 110.2 107.5 -5.5 5.0 -12.8 0.5 58 60 A F - 0 0 153 -6,-0.3 2,-0.5 -5,-0.2 -1,-0.4 -0.241 69.3-114.1 -89.8-178.5 7.4 -10.4 -1.3 59 61 A S - 0 0 61 -3,-0.1 3,-0.3 -2,-0.1 -9,-0.1 -0.984 20.4-175.8-124.2 125.4 9.6 -7.7 0.2 60 62 A L >> + 0 0 8 -2,-0.5 4,-0.9 1,-0.2 3,-0.8 0.030 53.9 115.6-104.2 24.2 9.0 -4.0 -0.4 61 63 A E G >4 S+ 0 0 114 1,-0.3 3,-1.2 2,-0.2 -1,-0.2 0.923 75.6 54.4 -53.8 -46.5 12.2 -3.2 1.6 62 64 A K G 34 S+ 0 0 179 -3,-0.3 -1,-0.3 1,-0.3 -2,-0.1 0.747 106.8 52.4 -59.4 -24.8 13.6 -1.8 -1.6 63 65 A F G <4 S+ 0 0 51 -3,-0.8 2,-0.4 -17,-0.1 -1,-0.3 0.625 88.8 95.5 -89.2 -14.1 10.5 0.4 -1.9 64 66 A K << - 0 0 44 -3,-1.2 -19,-0.1 -4,-0.9 -22,-0.1 -0.644 57.8-164.3 -81.3 129.8 11.0 1.8 1.6 65 67 A A 0 0 70 -2,-0.4 -1,-0.1 -21,-0.4 -20,-0.1 0.725 360.0 360.0 -87.8 -21.7 12.8 5.1 1.5 66 68 A N 0 0 171 -57,-0.0 -2,-0.1 0, 0.0 -21,-0.0 -0.191 360.0 360.0 177.0 360.0 13.7 5.1 5.2