==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOSKELETON 06-NOV-00 1HD3 . COMPND 2 MOLECULE: SPECTRIN ALPHA CHAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; . AUTHOR M.C.VEGA,A.R.VIGUERA,L.SERRANO . 58 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4124.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 65.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 39.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 5 A G 0 0 55 0, 0.0 29,-0.1 0, 0.0 30,-0.1 0.000 360.0 360.0 360.0 152.0 -2.0 3.7 4.7 2 6 A K + 0 0 185 28,-0.1 28,-0.1 2,-0.1 2,-0.0 0.490 360.0 107.1-113.2 -10.5 -0.9 0.0 4.4 3 7 A E E -A 29 0A 68 26,-0.5 26,-2.5 25,-0.1 2,-0.3 -0.292 60.4-133.9 -70.3 153.8 2.4 0.1 6.3 4 8 A L E -A 28 0A 69 24,-0.3 53,-2.6 36,-0.1 54,-0.3 -0.838 16.6-168.9-113.2 152.8 2.7 -1.4 9.8 5 9 A V E -AB 27 56A 0 22,-2.6 22,-3.0 -2,-0.3 2,-0.5 -0.970 19.7-129.7-137.9 148.9 4.3 -0.2 13.0 6 10 A L E -AB 26 55A 57 49,-2.7 49,-1.6 -2,-0.3 2,-0.5 -0.872 25.9-125.0-100.5 127.7 5.0 -1.9 16.3 7 11 A A E - B 0 54A 0 18,-3.0 17,-2.6 -2,-0.5 47,-0.2 -0.597 20.9-168.1 -74.3 119.6 3.8 -0.1 19.5 8 12 A L + 0 0 49 45,-2.8 2,-0.3 -2,-0.5 46,-0.2 0.705 67.6 14.4 -80.6 -25.2 6.8 0.4 21.7 9 13 A Y S S- 0 0 136 44,-0.9 2,-0.3 13,-0.1 15,-0.1 -0.872 85.4 -91.9-142.7 171.7 4.8 1.4 24.8 10 14 A D - 0 0 112 -2,-0.3 2,-0.3 12,-0.2 12,-0.2 -0.637 44.7-175.3 -80.7 150.5 1.3 1.4 26.2 11 15 A Y B -F 21 0B 32 10,-2.7 10,-2.2 -2,-0.3 2,-0.4 -0.856 15.8-158.8-155.8 116.7 -0.5 4.6 25.4 12 16 A Q - 0 0 147 -2,-0.3 8,-0.1 8,-0.2 7,-0.1 -0.809 38.3-101.2 -95.8 134.1 -4.0 5.7 26.6 13 17 A E - 0 0 89 -2,-0.4 7,-0.1 1,-0.1 36,-0.1 -0.304 31.2-171.3 -56.3 130.3 -5.7 8.4 24.5 14 18 A K + 0 0 164 1,-0.1 -1,-0.1 5,-0.1 -2,-0.0 0.417 69.7 24.0-102.2 -5.8 -5.4 11.9 26.0 15 19 A S S > S- 0 0 48 1,-0.0 3,-2.2 0, 0.0 -1,-0.1 -0.975 89.6 -97.3-154.1 160.2 -7.8 13.7 23.6 16 20 A P T 3 S+ 0 0 134 0, 0.0 -3,-0.0 0, 0.0 -1,-0.0 0.790 121.1 54.8 -52.8 -29.1 -10.7 12.8 21.3 17 21 A R T 3 S+ 0 0 128 30,-0.1 31,-2.5 2,-0.0 2,-0.1 0.483 95.8 83.4 -84.3 -6.5 -8.2 12.7 18.3 18 22 A E B < -c 48 0A 24 -3,-2.2 2,-0.3 29,-0.3 31,-0.2 -0.471 65.0-143.8 -94.6 168.1 -5.9 10.2 19.9 19 23 A V - 0 0 1 29,-1.8 2,-0.3 -2,-0.1 -5,-0.1 -0.958 14.2-119.0-131.9 153.5 -6.1 6.4 20.0 20 24 A T + 0 0 46 -2,-0.3 2,-0.3 -8,-0.1 -8,-0.2 -0.706 32.2 172.3 -94.0 141.4 -5.1 3.8 22.6 21 25 A M B -F 11 0B 4 -10,-2.2 -10,-2.7 -2,-0.3 2,-0.3 -0.968 23.5-137.6-144.3 155.6 -2.5 1.0 22.1 22 26 A K > - 0 0 135 -2,-0.3 3,-2.1 -12,-0.2 -15,-0.2 -0.861 41.9 -91.6-111.0 150.3 -0.7 -1.7 24.1 23 27 A K T 3 S+ 0 0 128 -2,-0.3 -15,-0.2 1,-0.3 3,-0.1 -0.342 115.7 32.2 -60.2 138.6 3.0 -2.4 23.8 24 28 A G T 3 S+ 0 0 42 -17,-2.6 -1,-0.3 1,-0.3 -16,-0.1 0.228 85.8 137.1 96.2 -16.1 3.4 -5.2 21.2 25 29 A D < - 0 0 42 -3,-2.1 -18,-3.0 -18,-0.1 2,-0.7 -0.398 49.5-140.7 -65.2 142.6 0.4 -4.1 19.1 26 30 A I E -A 6 0A 91 -20,-0.2 17,-0.3 -3,-0.1 2,-0.3 -0.925 28.2-172.9-107.8 112.0 1.0 -4.1 15.4 27 31 A L E -A 5 0A 1 -22,-3.0 -22,-2.6 -2,-0.7 2,-0.7 -0.757 27.4-117.7-109.9 154.3 -0.8 -1.0 14.0 28 32 A T E -AD 4 41A 30 13,-1.8 13,-1.8 -2,-0.3 2,-0.7 -0.811 28.6-134.7 -91.6 117.0 -1.4 0.2 10.5 29 33 A L E +AD 3 40A 8 -26,-2.5 -26,-0.5 -2,-0.7 11,-0.3 -0.645 28.2 175.2 -72.3 111.5 0.3 3.5 9.9 30 34 A L E + 0 0 44 9,-2.6 2,-0.3 -2,-0.7 10,-0.2 0.839 66.7 2.1 -87.8 -35.7 -2.2 5.8 8.2 31 35 A N E + D 0 39A 56 8,-1.8 8,-2.6 -30,-0.1 -1,-0.3 -0.884 47.6 171.5-159.8 121.8 -0.3 9.0 8.1 32 36 A S + 0 0 46 -2,-0.3 6,-0.1 6,-0.2 -1,-0.0 -0.047 48.3 114.7-119.0 26.9 3.2 9.9 9.2 33 37 A T + 0 0 125 4,-0.0 2,-0.3 6,-0.0 -1,-0.1 0.824 62.4 76.0 -67.7 -32.8 3.3 13.5 7.7 34 38 A N S S- 0 0 74 3,-0.5 17,-0.1 -3,-0.2 -3,-0.0 -0.642 76.7-142.0 -82.6 137.1 3.5 15.1 11.1 35 39 A K S S+ 0 0 160 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 0.778 97.4 30.4 -66.2 -29.6 6.9 14.9 12.9 36 40 A D S S+ 0 0 86 1,-0.2 15,-2.2 15,-0.1 2,-0.4 0.758 119.4 40.6-105.3 -29.1 5.3 14.3 16.3 37 41 A W E - E 0 50A 91 13,-0.3 -3,-0.5 14,-0.1 2,-0.4 -0.978 59.9-165.9-130.1 125.1 2.0 12.5 15.9 38 42 A W E - E 0 49A 41 11,-2.1 11,-1.9 -2,-0.4 2,-0.5 -0.854 21.3-129.3-107.9 137.4 1.3 9.7 13.5 39 43 A K E +DE 31 48A 55 -8,-2.6 -9,-2.6 -2,-0.4 -8,-1.8 -0.771 37.6 172.2 -86.6 128.5 -2.2 8.5 12.7 40 44 A V E -DE 29 47A 0 7,-2.9 7,-2.0 -2,-0.5 2,-0.5 -0.841 34.0-125.1-134.0 164.1 -2.6 4.8 13.1 41 45 A E E -DE 28 46A 56 -13,-1.8 -13,-1.8 -2,-0.3 2,-0.8 -0.982 16.9-163.7-112.9 119.3 -5.4 2.2 13.1 42 46 A V E > - E 0 45A 2 3,-2.5 3,-1.9 -2,-0.5 2,-0.5 -0.913 65.1 -65.6-104.0 96.8 -5.5 0.0 16.3 43 47 A N T 3 S- 0 0 131 -2,-0.8 -15,-0.1 -17,-0.3 0, 0.0 -0.389 122.6 -10.7 58.5-103.8 -7.6 -2.9 15.1 44 48 A D T 3 S+ 0 0 153 -2,-0.5 2,-0.3 -3,-0.1 -1,-0.3 0.034 123.1 87.3-112.9 27.4 -10.9 -1.2 14.5 45 49 A R E < - E 0 42A 123 -3,-1.9 -3,-2.5 -25,-0.1 2,-0.3 -0.913 57.7-159.8-124.2 151.8 -10.0 2.1 16.2 46 50 A Q E + E 0 41A 106 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.984 30.7 89.7-137.7 145.0 -8.3 5.2 14.6 47 51 A G E - E 0 40A 0 -7,-2.0 -7,-2.9 -2,-0.3 -29,-0.3 -0.988 61.9 -49.4 164.2-169.4 -6.4 8.2 15.8 48 52 A Y E +cE 18 39A 58 -31,-2.5 -29,-1.8 -2,-0.3 -9,-0.2 -0.689 37.5 174.5-101.6 150.4 -3.1 9.8 16.7 49 53 A V E - E 0 38A 0 -11,-1.9 -11,-2.1 -2,-0.3 2,-0.3 -0.953 48.8 -78.6-143.5 153.9 -0.3 8.6 18.9 50 54 A P E > - E 0 37A 16 0, 0.0 3,-2.8 0, 0.0 -13,-0.3 -0.449 37.4-137.4 -61.8 121.3 3.2 10.0 19.6 51 55 A A G > S+ 0 0 9 -15,-2.2 3,-1.4 1,-0.3 -14,-0.1 0.798 102.4 60.6 -45.1 -40.2 5.4 9.1 16.6 52 56 A A G 3 S+ 0 0 77 -16,-0.4 -1,-0.3 1,-0.2 -15,-0.1 0.631 95.0 63.5 -67.1 -14.2 8.2 8.2 19.0 53 57 A Y G < S+ 0 0 92 -3,-2.8 -45,-2.8 -45,-0.1 -44,-0.9 0.399 100.6 58.7 -91.4 0.4 6.1 5.5 20.7 54 58 A V E < -B 7 0A 9 -3,-1.4 2,-0.4 -47,-0.2 -47,-0.2 -0.887 67.6-148.0-127.0 161.1 5.8 3.4 17.5 55 59 A K E -B 6 0A 128 -49,-1.6 -49,-2.7 -2,-0.3 -3,-0.1 -0.985 21.7-122.8-133.9 118.9 8.4 1.7 15.2 56 60 A K E -B 5 0A 90 -2,-0.4 -51,-0.3 -51,-0.2 -53,-0.0 -0.341 14.9-142.9 -57.9 138.5 8.0 1.3 11.4 57 61 A L 0 0 83 -53,-2.6 -1,-0.1 1,-0.0 -52,-0.1 0.522 360.0 360.0 -82.0 -8.6 8.2 -2.5 10.5 58 62 A D 0 0 188 -54,-0.3 -2,-0.1 0, 0.0 -1,-0.0 -0.979 360.0 360.0-114.5 360.0 10.1 -1.7 7.2