==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE 20-JUN-06 2HDM . COMPND 2 MOLECULE: LYMPHOTACTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR B.F.VOLKMAN,R.L.TUINSTRA,F.C.PETERSON,E.S.ELGIN . 74 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5979.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 59.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 17.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 14.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 16.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A G 0 0 103 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -88.0 -12.6 -9.8 9.5 2 3 A S + 0 0 67 1,-0.1 3,-0.1 3,-0.0 7,-0.0 0.469 360.0 92.6-101.0 -4.9 -10.0 -7.8 7.8 3 4 A E S S+ 0 0 130 1,-0.2 2,-0.3 2,-0.1 -1,-0.1 0.961 101.1 3.5 -52.2 -63.5 -9.1 -10.6 5.3 4 5 A V S S+ 0 0 119 1,-0.1 -1,-0.2 5,-0.0 0, 0.0 -0.913 72.8 122.7-125.6 153.2 -11.5 -9.5 2.6 5 6 A S - 0 0 71 -2,-0.3 3,-0.1 -3,-0.1 -1,-0.1 0.110 38.3-168.3-168.9 -52.0 -13.7 -6.4 2.4 6 7 A D + 0 0 125 1,-0.2 2,-1.5 0, 0.0 -2,-0.0 0.017 60.4 60.2 66.2-178.5 -12.9 -4.4 -0.7 7 8 A K S S- 0 0 178 1,-0.1 2,-0.3 2,-0.1 -1,-0.2 -0.501 132.5 -11.7 64.4 -88.9 -14.1 -0.8 -1.4 8 9 A R + 0 0 103 -2,-1.5 -1,-0.1 -3,-0.1 3,-0.0 -0.833 65.1 179.8-139.3 97.9 -12.5 0.6 1.8 9 10 A T S S+ 0 0 50 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 0.756 76.9 20.2 -66.5 -24.5 -11.3 -2.0 4.1 10 11 A a - 0 0 23 -3,-0.1 -1,-0.1 1,-0.1 25,-0.1 -0.949 52.0-164.5-143.6 157.3 -10.1 0.7 6.5 11 12 A V S S+ 0 0 93 -2,-0.3 2,-0.4 36,-0.1 -1,-0.1 0.488 71.2 81.3-118.1 -14.5 -10.8 4.4 7.1 12 13 A S - 0 0 89 23,-0.0 2,-0.4 37,-0.0 35,-0.1 -0.770 65.2-151.7 -97.1 141.8 -7.8 5.2 9.2 13 14 A L - 0 0 50 -2,-0.4 2,-0.6 33,-0.0 35,-0.3 -0.889 13.7-126.8-116.8 142.8 -4.4 5.9 7.7 14 15 A T B +a 48 0A 40 33,-2.9 35,-1.9 -2,-0.4 32,-0.0 -0.768 22.3 179.7 -85.5 120.8 -1.0 5.4 9.0 15 16 A T + 0 0 103 -2,-0.6 -1,-0.2 33,-0.2 40,-0.1 0.686 59.9 86.4 -93.2 -23.1 1.0 8.6 8.9 16 17 A Q S S- 0 0 151 1,-0.1 2,-0.2 36,-0.0 33,-0.2 -0.285 85.8 -97.6 -75.0 165.2 4.1 7.0 10.5 17 18 A R - 0 0 196 31,-0.1 -1,-0.1 -2,-0.0 -2,-0.1 -0.482 27.3-167.5 -95.7 156.9 6.6 5.2 8.3 18 19 A L - 0 0 34 -2,-0.2 2,-0.1 22,-0.0 5,-0.1 -0.926 43.5 -89.9-126.6 149.5 7.2 1.6 7.3 19 20 A P > - 0 0 52 0, 0.0 3,-2.0 0, 0.0 4,-0.3 -0.443 31.0-135.4 -59.4 135.6 10.4 0.3 5.6 20 21 A b G > S+ 0 0 54 1,-0.3 3,-0.8 2,-0.2 41,-0.0 0.714 104.1 66.6 -70.4 -17.1 9.7 0.5 1.8 21 22 A S G 3 S+ 0 0 86 1,-0.2 -1,-0.3 19,-0.0 0, 0.0 0.603 93.3 59.6 -76.8 -12.7 11.2 -3.0 1.6 22 23 A R G < S+ 0 0 143 -3,-2.0 19,-1.6 18,-0.1 2,-0.4 0.512 77.0 113.6 -92.1 -5.9 8.2 -4.3 3.6 23 24 A I E < +B 40 0A 11 -3,-0.8 17,-0.2 -4,-0.3 3,-0.1 -0.544 37.8 174.5 -69.1 121.0 5.9 -3.1 0.9 24 25 A K E - 0 0 66 15,-3.3 2,-0.3 1,-0.5 -1,-0.2 0.892 63.5 -41.8 -90.1 -55.5 4.3 -6.1 -0.7 25 26 A T E -B 39 0A 57 14,-0.9 14,-3.2 48,-0.0 -1,-0.5 -0.943 57.8-133.8-165.9 165.8 1.8 -4.3 -2.9 26 27 A Y E -B 38 0A 52 -2,-0.3 2,-0.4 12,-0.2 12,-0.2 -0.917 7.5-163.4-132.8 160.0 -0.6 -1.4 -2.7 27 28 A T E -B 37 0A 81 10,-2.5 10,-3.4 -2,-0.3 2,-0.5 -0.962 14.9-147.9-140.5 121.1 -4.1 -0.6 -3.6 28 29 A I E -B 36 0A 73 -2,-0.4 2,-0.5 8,-0.3 8,-0.3 -0.780 10.3-147.3 -92.6 132.7 -5.3 3.0 -3.7 29 30 A T E -B 35 0A 13 6,-3.2 6,-0.8 -2,-0.5 2,-0.5 -0.865 11.8-155.4-101.9 128.5 -8.9 3.7 -2.8 30 31 A E + 0 0 154 -2,-0.5 2,-0.2 4,-0.2 4,-0.1 -0.893 45.3 86.2-109.4 133.7 -10.7 6.4 -4.6 31 32 A G S S- 0 0 63 -2,-0.5 3,-0.2 1,-0.0 -1,-0.0 -0.719 99.0 -45.3-175.6-124.1 -13.6 8.3 -3.3 32 33 A S S S+ 0 0 138 1,-0.3 2,-0.7 -2,-0.2 -2,-0.0 0.723 134.6 45.3 -99.4 -33.5 -13.8 11.4 -1.1 33 34 A L S S- 0 0 67 2,-0.0 2,-0.6 -3,-0.0 -1,-0.3 -0.955 82.2-157.6-110.9 110.0 -11.3 10.0 1.3 34 35 A R + 0 0 144 -2,-0.7 2,-0.4 -3,-0.2 -4,-0.2 -0.817 17.4 172.3 -92.8 120.2 -8.4 8.6 -0.7 35 36 A A E -B 29 0A 0 -6,-0.8 -6,-3.2 -2,-0.6 2,-0.6 -0.979 24.6-143.0-127.9 139.3 -6.4 6.0 1.2 36 37 A V E -BC 28 48A 0 12,-1.9 12,-3.2 -2,-0.4 2,-0.5 -0.912 15.1-151.8-104.5 119.5 -3.6 3.8 -0.1 37 38 A I E -BC 27 47A 13 -10,-3.4 -10,-2.5 -2,-0.6 2,-0.5 -0.794 10.5-166.4 -91.6 127.6 -3.6 0.4 1.4 38 39 A F E -BC 26 46A 2 8,-2.8 8,-3.1 -2,-0.5 2,-0.4 -0.956 11.5-145.8-114.2 129.6 -0.2 -1.3 1.5 39 40 A I E -BC 25 45A 37 -14,-3.2 -15,-3.3 -2,-0.5 -14,-0.9 -0.781 20.1-135.3 -90.7 137.4 0.1 -4.8 2.2 40 41 A T E > -B 23 0A 19 4,-3.2 3,-2.4 -2,-0.4 -17,-0.2 -0.559 24.3-107.7 -89.2 162.1 3.2 -5.7 4.2 41 42 A K T 3 S+ 0 0 143 -19,-1.6 -18,-0.1 1,-0.3 -1,-0.1 0.656 118.5 67.3 -64.0 -16.0 5.5 -8.5 3.4 42 43 A R T 3 S- 0 0 209 -20,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.667 120.6-108.9 -76.1 -16.7 4.1 -10.3 6.4 43 44 A G S < S+ 0 0 47 -3,-2.4 2,-0.3 1,-0.4 -2,-0.2 0.551 79.1 125.1 99.1 9.4 0.8 -10.5 4.5 44 45 A L - 0 0 92 -4,-0.1 -4,-3.2 1,-0.0 2,-0.4 -0.701 60.0-116.8 -99.0 154.4 -1.0 -8.0 6.7 45 46 A K E - C 0 39A 68 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.750 28.0-175.4 -96.4 137.0 -2.7 -5.0 5.4 46 47 A V E - C 0 38A 31 -8,-3.1 -8,-2.8 -2,-0.4 2,-0.5 -0.931 15.3-143.9-123.8 149.2 -1.7 -1.6 6.3 47 48 A a E - C 0 37A 16 -2,-0.4 -33,-2.9 -10,-0.3 2,-0.3 -0.975 23.2-172.7-121.2 127.7 -3.4 1.6 5.4 48 49 A A E -aC 14 36A 1 -12,-3.2 -12,-1.9 -2,-0.5 -33,-0.2 -0.857 31.5-102.1-128.3 154.2 -1.2 4.6 4.7 49 50 A D > - 0 0 32 -35,-1.9 3,-1.6 -2,-0.3 6,-0.2 -0.628 26.2-151.1 -74.9 118.2 -1.6 8.3 4.0 50 51 A P T 3 S+ 0 0 30 0, 0.0 -1,-0.1 0, 0.0 -15,-0.1 0.679 93.8 57.3 -68.5 -17.2 -1.2 8.9 0.2 51 52 A Q T 3 S+ 0 0 138 4,-0.1 2,-0.4 5,-0.0 -2,-0.1 0.361 79.1 112.0 -97.5 5.2 0.2 12.4 0.7 52 53 A A S <> S- 0 0 12 -3,-1.6 4,-2.7 1,-0.1 5,-0.2 -0.656 70.9-134.9 -75.0 133.0 3.0 11.2 2.9 53 54 A T H > S+ 0 0 107 -2,-0.4 4,-1.9 1,-0.2 -1,-0.1 0.868 105.4 49.7 -59.3 -38.0 6.3 11.6 1.1 54 55 A W H > S+ 0 0 22 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.862 110.6 50.9 -72.1 -33.5 7.5 8.2 2.0 55 56 A V H > S+ 0 0 0 -6,-0.2 4,-3.8 2,-0.2 5,-0.4 0.927 107.2 53.1 -66.3 -44.9 4.3 6.7 0.8 56 57 A R H X S+ 0 0 137 -4,-2.7 4,-1.2 1,-0.2 -2,-0.2 0.872 108.3 51.8 -58.1 -38.3 4.6 8.6 -2.5 57 58 A D H X S+ 0 0 104 -4,-1.9 4,-1.3 -5,-0.2 -1,-0.2 0.926 118.2 35.8 -62.3 -45.4 8.0 7.0 -2.8 58 59 A b H X S+ 0 0 2 -4,-2.1 4,-2.9 2,-0.2 5,-0.3 0.889 114.0 53.2 -80.5 -39.7 6.8 3.5 -2.2 59 60 A V H X S+ 0 0 11 -4,-3.8 4,-0.9 1,-0.2 -1,-0.2 0.823 118.4 41.4 -65.0 -26.9 3.4 3.7 -4.0 60 61 A R H X S+ 0 0 154 -4,-1.2 4,-2.3 -5,-0.4 -2,-0.2 0.736 107.9 59.2 -90.7 -27.1 5.5 5.0 -6.9 61 62 A S H X S+ 0 0 41 -4,-1.3 4,-1.5 2,-0.2 -2,-0.2 0.944 111.4 41.8 -62.9 -46.9 8.3 2.5 -6.3 62 63 A M H X S+ 0 0 27 -4,-2.9 4,-0.6 2,-0.2 -2,-0.2 0.857 113.3 54.3 -67.9 -34.0 5.7 -0.3 -6.9 63 64 A D H >< S+ 0 0 51 -4,-0.9 3,-0.6 -5,-0.3 4,-0.3 0.892 107.1 50.8 -62.4 -39.8 4.3 1.7 -9.7 64 65 A R H >X S+ 0 0 194 -4,-2.3 4,-0.8 1,-0.3 3,-0.7 0.790 105.7 55.4 -69.2 -30.7 7.8 1.8 -11.2 65 66 A K H 3< S+ 0 0 90 -4,-1.5 5,-0.4 1,-0.2 -1,-0.3 0.670 102.2 58.7 -74.4 -17.4 7.9 -2.0 -10.8 66 67 A S T << S+ 0 0 71 -4,-0.6 -1,-0.2 -3,-0.6 -2,-0.2 0.533 91.1 69.6 -89.8 -9.1 4.8 -2.1 -12.9 67 68 A N T <4 S+ 0 0 104 -3,-0.7 2,-0.2 -4,-0.3 -2,-0.2 0.933 98.4 55.2 -70.1 -45.2 6.5 -0.3 -15.8 68 69 A T S < S- 0 0 79 -4,-0.8 2,-1.4 2,-0.1 0, 0.0 -0.585 96.2-116.8 -88.5 148.3 8.6 -3.4 -16.4 69 70 A R S S+ 0 0 221 -2,-0.2 2,-0.1 1,-0.1 -3,-0.1 -0.673 82.0 88.4 -94.8 85.2 6.8 -6.6 -17.0 70 71 A N + 0 0 125 -2,-1.4 2,-0.6 -5,-0.4 -2,-0.1 -0.485 43.8 173.3-173.5 95.8 7.9 -8.8 -14.1 71 72 A N - 0 0 91 -2,-0.1 2,-1.2 -5,-0.1 -5,-0.0 -0.916 17.0-157.7-118.1 104.5 5.9 -8.7 -11.0 72 73 A M - 0 0 163 -2,-0.6 2,-1.0 2,-0.1 -2,-0.0 -0.700 12.9-178.0 -82.7 95.5 6.9 -11.3 -8.4 73 74 A I 0 0 137 -2,-1.2 -2,-0.1 -48,-0.0 -48,-0.0 -0.827 360.0 360.0 -97.3 95.4 3.9 -11.7 -6.3 74 75 A Q 0 0 179 -2,-1.0 -2,-0.1 -50,-0.1 -1,-0.0 -0.779 360.0 360.0-142.6 360.0 5.0 -14.1 -3.6