==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=17-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 02-OCT-12 4HDD . COMPND 2 MOLECULE: RHOMBOID PROTEASE GLPG; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR C.LAZARENO-SAEZ,E.ARUTYUNOVA,N.COQUELLE,M.J.LEMIEUX . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6432.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 65.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 36.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A L 0 0 197 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 147.6 17.0 23.0 39.0 2 3 A X - 0 0 147 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.778 360.0-174.6 -89.1 114.3 13.4 21.8 38.7 3 4 A I - 0 0 116 -2,-0.7 2,-0.3 1,-0.3 -1,-0.2 0.933 54.0 -53.7 -75.4 -51.4 13.0 19.9 35.5 4 5 A T - 0 0 79 2,-0.0 2,-0.3 0, 0.0 -1,-0.3 -0.941 47.0-113.7-170.1-176.3 9.3 19.2 35.5 5 6 A S - 0 0 79 -2,-0.3 2,-0.4 -3,-0.1 23,-0.0 -0.986 16.8-161.9-138.3 150.6 6.4 17.8 37.5 6 7 A F - 0 0 86 -2,-0.3 6,-0.0 1,-0.1 -2,-0.0 -0.991 18.4-148.2-128.0 141.8 4.1 14.8 37.1 7 8 A A S S+ 0 0 113 -2,-0.4 -1,-0.1 1,-0.1 0, 0.0 0.899 89.8 66.9 -67.7 -42.7 0.8 14.1 38.7 8 9 A N S > S- 0 0 56 1,-0.2 4,-2.2 2,-0.0 3,-0.4 -0.718 70.2-158.8 -89.1 114.4 1.4 10.4 38.6 9 10 A P H > S+ 0 0 59 0, 0.0 4,-2.4 0, 0.0 -1,-0.2 0.815 92.3 55.7 -64.3 -27.4 4.3 9.4 41.0 10 11 A R H > S+ 0 0 184 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.842 107.0 50.4 -71.8 -33.6 5.0 6.2 39.2 11 12 A V H > S+ 0 0 69 -3,-0.4 4,-1.8 2,-0.2 -1,-0.2 0.941 111.9 47.6 -66.9 -47.2 5.4 8.1 36.0 12 13 A A H X S+ 0 0 14 -4,-2.2 4,-2.3 1,-0.2 -2,-0.2 0.938 112.4 49.6 -57.2 -46.2 7.9 10.5 37.7 13 14 A Q H X S+ 0 0 79 -4,-2.4 4,-3.0 1,-0.2 -1,-0.2 0.862 105.9 56.3 -66.2 -35.3 9.7 7.6 39.2 14 15 A A H X S+ 0 0 57 -4,-1.9 4,-2.2 2,-0.2 -1,-0.2 0.907 109.7 46.6 -59.7 -43.1 10.0 5.8 35.8 15 16 A F H X S+ 0 0 85 -4,-1.8 4,-2.7 2,-0.2 -2,-0.2 0.939 114.0 47.4 -63.6 -46.8 11.7 8.9 34.4 16 17 A V H X S+ 0 0 21 -4,-2.3 4,-2.2 1,-0.2 10,-0.2 0.932 112.5 49.9 -60.4 -43.9 14.0 9.1 37.4 17 18 A D H X S+ 0 0 87 -4,-3.0 4,-1.2 1,-0.2 -1,-0.2 0.915 111.2 48.6 -64.3 -41.8 14.8 5.4 37.2 18 19 A Y H >X S+ 0 0 138 -4,-2.2 3,-0.8 -5,-0.2 4,-0.8 0.948 110.0 51.1 -63.8 -46.6 15.6 5.6 33.5 19 20 A X H ><>S+ 0 0 41 -4,-2.7 5,-2.3 1,-0.3 3,-1.1 0.887 103.2 59.7 -61.2 -36.2 17.9 8.7 34.0 20 21 A A H ><5S+ 0 0 46 -4,-2.2 3,-1.6 1,-0.3 -1,-0.3 0.851 99.6 57.0 -59.3 -33.2 19.8 6.8 36.8 21 22 A T H <<5S+ 0 0 102 -4,-1.2 -1,-0.3 -3,-0.8 -2,-0.2 0.707 105.5 52.0 -72.5 -17.0 20.7 4.1 34.2 22 23 A Q T <<5S- 0 0 111 -3,-1.1 -1,-0.3 -4,-0.8 -2,-0.2 0.284 126.3-103.8 -96.5 9.2 22.2 6.9 32.1 23 24 A G T < 5S+ 0 0 66 -3,-1.6 2,-0.5 1,-0.2 -3,-0.2 0.616 83.2 123.7 80.7 14.7 24.3 8.1 35.1 24 25 A V < - 0 0 65 -5,-2.3 2,-0.6 -6,-0.1 -2,-0.2 -0.940 49.3-150.1-112.3 123.9 22.1 11.1 35.9 25 26 A I + 0 0 134 -2,-0.5 2,-0.3 -3,-0.1 -8,-0.1 -0.809 18.8 175.5-100.7 119.3 20.7 11.3 39.4 26 27 A L - 0 0 50 -2,-0.6 2,-0.3 -10,-0.2 -6,-0.0 -0.850 13.4-152.7-113.9 155.9 17.4 13.1 39.9 27 28 A T - 0 0 133 -2,-0.3 2,-0.5 2,-0.0 -2,-0.0 -0.852 10.6-131.9-124.9 163.1 15.4 13.5 43.1 28 29 A I - 0 0 71 -2,-0.3 2,-0.8 2,-0.0 -23,-0.0 -0.969 6.1-158.6-120.7 130.1 11.6 13.9 43.7 29 30 A Q - 0 0 143 -2,-0.5 2,-0.7 2,-0.0 -2,-0.0 -0.919 23.0-165.6 -99.7 102.2 9.8 16.4 45.8 30 31 A Q - 0 0 91 -2,-0.8 2,-0.7 2,-0.0 -2,-0.0 -0.843 5.0-169.6 -96.9 109.6 6.5 14.6 46.2 31 32 A H - 0 0 146 -2,-0.7 2,-0.4 2,-0.0 -2,-0.0 -0.867 7.3-166.8-116.1 110.3 3.8 16.9 47.6 32 33 A N + 0 0 114 -2,-0.7 2,-0.3 2,-0.0 -2,-0.0 -0.641 13.7 166.9 -97.0 120.5 0.9 15.0 48.5 33 34 A Q - 0 0 159 -2,-0.4 2,-0.7 2,-0.0 -2,-0.0 -0.847 13.8-178.2-147.6 119.7 -2.5 16.5 49.3 34 35 A S - 0 0 117 -2,-0.3 2,-0.5 2,-0.0 -2,-0.0 -0.926 18.5-158.4-107.8 103.6 -5.9 14.9 49.7 35 36 A D - 0 0 103 -2,-0.7 2,-0.6 1,-0.0 -2,-0.0 -0.737 7.9-144.1 -89.8 130.3 -8.5 17.6 50.4 36 37 A V - 0 0 139 -2,-0.5 2,-0.4 2,-0.0 -2,-0.0 -0.842 18.9-168.3-101.6 122.3 -11.6 16.3 52.0 37 38 A W - 0 0 222 -2,-0.6 2,-0.4 0, 0.0 -2,-0.0 -0.863 12.4-162.5-117.1 142.6 -14.8 18.0 50.9 38 39 A L - 0 0 56 -2,-0.4 6,-0.1 1,-0.1 3,-0.0 -0.988 3.7-167.8-124.1 122.6 -18.3 17.9 52.3 39 40 A A S S+ 0 0 90 -2,-0.4 2,-0.9 1,-0.1 -1,-0.1 0.833 75.2 68.3 -77.0 -32.5 -21.3 19.0 50.2 40 41 A D > - 0 0 107 1,-0.2 3,-2.0 2,-0.0 4,-0.2 -0.781 64.1-166.9 -99.7 99.0 -23.9 19.2 52.9 41 42 A E G > S+ 0 0 156 -2,-0.9 3,-1.8 1,-0.3 4,-0.3 0.735 81.4 70.0 -62.0 -22.5 -23.0 22.0 55.3 42 43 A S G 3 S+ 0 0 116 1,-0.3 -1,-0.3 2,-0.1 4,-0.3 0.727 97.1 53.6 -70.0 -18.1 -25.4 20.8 58.0 43 44 A Q G <> S+ 0 0 79 -3,-2.0 4,-2.4 1,-0.2 -1,-0.3 0.379 80.9 99.3 -88.7 0.8 -23.1 17.8 58.6 44 45 A A H <> S+ 0 0 27 -3,-1.8 4,-2.6 1,-0.2 5,-0.2 0.903 80.6 46.8 -61.1 -43.7 -20.0 19.9 59.1 45 46 A E H > S+ 0 0 118 -4,-0.3 4,-2.3 -3,-0.3 -1,-0.2 0.921 112.9 50.3 -66.4 -41.9 -20.0 19.9 62.9 46 47 A R H > S+ 0 0 179 -4,-0.3 4,-2.1 1,-0.2 -1,-0.2 0.913 112.2 47.5 -59.9 -47.1 -20.5 16.2 63.0 47 48 A V H X S+ 0 0 66 -4,-2.4 4,-2.6 1,-0.2 -2,-0.2 0.904 111.1 50.8 -62.8 -41.6 -17.7 15.6 60.6 48 49 A R H X S+ 0 0 172 -4,-2.6 4,-2.1 -5,-0.2 -2,-0.2 0.892 108.2 52.9 -67.6 -33.4 -15.3 17.9 62.5 49 50 A A H X S+ 0 0 64 -4,-2.3 4,-1.6 1,-0.2 -1,-0.2 0.933 112.6 44.2 -63.6 -46.3 -16.1 16.1 65.8 50 51 A E H X S+ 0 0 72 -4,-2.1 4,-2.8 1,-0.2 -2,-0.2 0.888 109.1 57.3 -65.7 -38.4 -15.2 12.7 64.2 51 52 A L H X S+ 0 0 78 -4,-2.6 4,-2.8 1,-0.2 5,-0.2 0.914 103.1 54.3 -60.1 -40.6 -12.1 14.2 62.5 52 53 A A H X S+ 0 0 64 -4,-2.1 4,-1.2 1,-0.2 -1,-0.2 0.936 111.9 44.0 -59.7 -42.9 -10.9 15.2 66.0 53 54 A R H X S+ 0 0 115 -4,-1.6 4,-0.9 1,-0.2 3,-0.2 0.923 112.9 51.9 -66.8 -42.2 -11.2 11.7 67.2 54 55 A F H >< S+ 0 0 75 -4,-2.8 3,-0.9 1,-0.2 -2,-0.2 0.915 106.1 53.6 -60.8 -44.6 -9.7 10.2 64.0 55 56 A L H 3< S+ 0 0 115 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.819 100.0 61.8 -64.3 -31.8 -6.6 12.5 64.2 56 57 A E H 3< S- 0 0 156 -4,-1.2 -1,-0.3 -3,-0.2 -2,-0.2 0.841 133.3 -4.6 -64.2 -30.4 -5.9 11.3 67.8 57 58 A N X< + 0 0 62 -4,-0.9 3,-2.0 -3,-0.9 -1,-0.2 -0.452 61.6 178.8-163.2 85.7 -5.5 7.8 66.3 58 59 A P T 3 S+ 0 0 69 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 0.734 85.0 60.8 -63.5 -18.6 -6.1 7.1 62.6 59 60 A A T 3 S+ 0 0 60 -5,-0.1 5,-0.1 4,-0.1 -5,-0.0 0.330 72.8 134.0 -92.6 9.9 -5.2 3.5 63.0 60 61 A D X> - 0 0 38 -3,-2.0 3,-2.0 -6,-0.2 4,-1.9 -0.289 69.7-116.5 -58.4 140.8 -8.0 2.8 65.6 61 62 A P H 3> S+ 0 0 88 0, 0.0 4,-2.6 0, 0.0 -1,-0.1 0.769 112.4 69.0 -49.6 -30.0 -9.8 -0.5 64.7 62 63 A R H 34 S+ 0 0 105 1,-0.2 4,-0.1 2,-0.2 -2,-0.1 0.841 108.9 36.1 -61.7 -29.2 -13.1 1.6 64.1 63 64 A Y H X4 S+ 0 0 49 -3,-2.0 3,-0.9 2,-0.1 -1,-0.2 0.865 117.7 50.0 -89.5 -41.8 -11.4 3.0 61.0 64 65 A L H 3< S+ 0 0 130 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.1 0.860 116.3 41.6 -62.1 -38.8 -9.4 -0.1 59.9 65 66 A A T 3< 0 0 84 -4,-2.6 -1,-0.2 -5,-0.2 -2,-0.1 0.307 360.0 360.0 -99.3 11.7 -12.4 -2.3 60.1 66 67 A A < 0 0 123 -3,-0.9 -3,-0.1 -5,-0.1 -4,-0.0 -0.238 360.0 360.0 -61.1 360.0 -15.1 0.0 58.6