==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-JUN-06 2HEQ . COMPND 2 MOLECULE: YORP PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR T.A.RAMELOT,J.R.CORT,D.WANG,H.JANJUA,K.CUNNINGHAM,L.-C.MA, . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7086.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 51.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 23.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 241 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 109.7 47.2 -8.7 2.3 2 2 A A + 0 0 111 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.986 360.0 77.5-155.8 147.0 48.6 -12.2 1.9 3 3 A G - 0 0 68 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.444 69.8 -84.9 131.8 156.1 51.0 -14.1 -0.3 4 4 A D - 0 0 141 -2,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.846 28.4-172.8 -98.5 113.0 54.7 -14.6 -0.9 5 5 A P + 0 0 122 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.065 39.0 135.5 -90.5 25.5 56.2 -11.9 -3.1 6 6 A L + 0 0 120 1,-0.2 -2,-0.1 2,-0.1 4,-0.1 -0.655 27.5 176.9 -81.8 111.7 59.6 -13.8 -3.3 7 7 A P - 0 0 97 0, 0.0 -1,-0.2 0, 0.0 4,-0.1 0.954 64.0 -69.1 -77.1 -56.0 60.8 -13.8 -6.9 8 8 A K S S- 0 0 185 2,-0.0 3,-0.1 0, 0.0 -2,-0.1 0.095 91.8 -36.4-163.1 -65.0 64.1 -15.6 -6.4 9 9 A Y S S+ 0 0 73 1,-0.3 2,-0.7 39,-0.0 39,-0.0 0.401 112.8 57.8-137.6 -73.3 66.8 -13.6 -4.5 10 10 A W + 0 0 111 1,-0.2 -1,-0.3 -4,-0.1 33,-0.0 -0.581 43.9 167.6 -80.3 112.7 67.1 -9.8 -5.0 11 11 A S + 0 0 60 -2,-0.7 -1,-0.2 -3,-0.1 -5,-0.0 0.841 67.2 59.4 -85.5 -39.8 63.8 -8.0 -4.2 12 12 A Y S S- 0 0 59 1,-0.0 -1,-0.1 4,-0.0 3,-0.1 -0.768 79.6-141.0 -97.2 133.9 65.4 -4.5 -4.2 13 13 A P > - 0 0 74 0, 0.0 3,-1.0 0, 0.0 2,-0.3 -0.242 30.0 -82.7 -84.8 173.9 67.1 -3.2 -7.4 14 14 A V T 3 S+ 0 0 84 1,-0.2 25,-0.2 25,-0.1 3,-0.1 -0.606 112.7 31.6 -78.3 135.7 70.3 -1.1 -7.8 15 15 A G T 3 S+ 0 0 37 23,-3.5 2,-0.4 1,-0.3 -1,-0.2 0.400 83.5 140.0 98.5 -0.3 69.9 2.6 -7.3 16 16 A L < - 0 0 44 -3,-1.0 22,-2.4 22,-0.3 2,-0.5 -0.610 50.5-132.8 -80.3 129.8 67.1 2.3 -4.8 17 17 A A E +A 37 0A 34 -2,-0.4 52,-2.8 20,-0.2 2,-0.3 -0.720 36.7 168.0 -81.3 128.0 67.1 4.7 -1.9 18 18 A V E -AB 36 68A 0 18,-2.2 18,-3.3 -2,-0.5 2,-0.4 -0.865 28.6-130.8-134.3 166.6 66.6 2.9 1.4 19 19 A E E -AB 35 67A 80 48,-2.8 48,-2.2 -2,-0.3 2,-0.9 -0.932 22.3-122.1-119.3 148.4 66.9 3.6 5.1 20 20 A I E - B 0 66A 1 14,-3.0 13,-3.1 -2,-0.4 14,-0.4 -0.797 30.1-150.8 -91.2 106.6 68.6 1.5 7.7 21 21 A N > - 0 0 24 44,-0.9 3,-1.2 -2,-0.9 2,-0.4 -0.323 28.7-103.6 -73.9 161.6 66.1 0.5 10.4 22 22 A N T 3 S+ 0 0 86 1,-0.3 3,-0.4 10,-0.2 -1,-0.1 0.075 102.6 91.7 -78.2 29.9 67.2 -0.1 14.0 23 23 A N T 3 S+ 0 0 103 -2,-0.4 3,-0.3 1,-0.2 -1,-0.3 0.446 72.2 68.0-101.7 -3.3 66.8 -3.9 13.5 24 24 A A <> + 0 0 6 -3,-1.2 4,-2.6 41,-0.2 3,-0.2 0.086 66.4 122.5 -94.7 19.8 70.5 -4.1 12.5 25 25 A R T 4 S+ 0 0 134 -3,-0.4 2,-1.1 1,-0.3 -1,-0.2 0.901 72.0 45.2 -46.6 -53.5 71.2 -3.2 16.1 26 26 A Y T 4 S+ 0 0 223 -3,-0.3 -1,-0.3 1,-0.2 -3,-0.0 -0.736 121.5 32.5 -97.6 85.4 73.2 -6.4 16.7 27 27 A G T 4 S+ 0 0 50 -2,-1.1 -2,-0.2 -3,-0.2 -1,-0.2 -0.025 124.0 36.9 160.4 -37.7 75.4 -6.4 13.6 28 28 A C S >< S- 0 0 13 -4,-2.6 3,-1.9 31,-0.0 4,-0.2 -0.653 81.2-153.5-136.7 77.8 75.9 -2.7 12.8 29 29 A P T 3 S- 0 0 107 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 -0.337 77.5 -9.5 -62.4 120.1 76.3 -0.9 16.1 30 30 A H T 3 S+ 0 0 176 -2,-0.2 -5,-0.1 -5,-0.1 -8,-0.0 0.779 110.0 102.0 63.1 29.6 75.3 2.7 15.9 31 31 A H < + 0 0 30 -3,-1.9 2,-0.3 -7,-0.1 3,-0.3 0.137 62.8 91.4-120.2 14.4 75.1 2.5 12.1 32 32 A V + 0 0 23 -4,-0.2 -11,-0.2 1,-0.2 -10,-0.2 -0.812 60.5 50.6-115.4 151.1 71.3 2.2 12.2 33 33 A G S S+ 0 0 51 -13,-3.1 2,-0.2 1,-0.4 -1,-0.2 0.569 91.2 93.0 99.9 12.9 68.6 4.9 11.9 34 34 A R S S- 0 0 71 -14,-0.4 -14,-3.0 -3,-0.3 -1,-0.4 -0.551 71.4-105.3-122.6-171.7 70.1 6.6 8.8 35 35 A K E +A 19 0A 91 -16,-0.3 19,-2.3 -2,-0.2 -16,-0.3 -0.830 33.5 168.9-120.2 159.2 69.6 6.4 5.1 36 36 A G E -AC 18 53A 10 -18,-3.3 -18,-2.2 -2,-0.3 2,-0.4 -0.896 29.5-111.1-154.3-178.9 71.6 4.9 2.3 37 37 A K E -AC 17 52A 90 15,-1.7 15,-3.0 -2,-0.3 2,-0.7 -0.990 23.0-130.3-129.5 125.4 71.7 4.0 -1.4 38 38 A I E + C 0 51A 0 -22,-2.4 -23,-3.5 -2,-0.4 -22,-0.3 -0.638 38.8 159.8 -73.9 112.6 71.8 0.4 -2.8 39 39 A I E + 0 0 58 11,-2.6 2,-0.3 -2,-0.7 -1,-0.2 0.671 57.4 28.2-110.3 -24.0 74.7 0.5 -5.3 40 40 A E E - C 0 50A 122 10,-1.2 10,-2.1 -27,-0.1 2,-0.4 -0.931 67.8-128.3-137.4 159.6 75.6 -3.2 -5.6 41 41 A H E - C 0 49A 59 -2,-0.3 2,-0.3 8,-0.2 8,-0.3 -0.922 24.5-168.1-109.4 135.1 74.1 -6.6 -5.4 42 42 A L - 0 0 60 6,-3.2 2,-0.6 -2,-0.4 8,-0.0 -0.882 19.6-142.2-118.6 151.1 75.6 -9.3 -3.2 43 43 A H + 0 0 161 -2,-0.3 2,-0.3 -33,-0.0 5,-0.1 -0.917 55.1 118.1-112.3 101.8 74.9 -13.0 -3.0 44 44 A S - 0 0 47 -2,-0.6 -2,-0.1 3,-0.2 5,-0.0 -0.924 64.1-133.4-164.9 137.4 75.3 -13.9 0.7 45 45 A A S S+ 0 0 97 -2,-0.3 3,-0.1 1,-0.2 17,-0.0 0.629 112.3 46.9 -74.2 -12.7 72.9 -15.2 3.3 46 46 A T S S+ 0 0 75 1,-0.3 2,-0.4 15,-0.0 -1,-0.2 0.805 126.0 17.4 -91.8 -37.0 74.1 -12.5 5.6 47 47 A Y + 0 0 80 1,-0.1 15,-0.3 15,-0.1 -1,-0.3 -0.992 48.7 178.1-146.0 129.5 73.9 -9.6 3.2 48 48 A D S S+ 0 0 11 13,-1.2 -6,-3.2 -2,-0.4 2,-0.3 0.677 71.1 34.4-102.3 -24.5 72.1 -9.2 -0.1 49 49 A Y E -CD 41 61A 0 12,-3.1 12,-2.7 -8,-0.3 2,-0.6 -0.897 65.4-131.5-134.1 158.6 73.0 -5.6 -0.9 50 50 A A E -CD 40 60A 6 -10,-2.1 -11,-2.6 -2,-0.3 -10,-1.2 -0.956 31.0-165.7-110.5 113.9 75.8 -3.0 -0.6 51 51 A V E -CD 38 59A 0 8,-2.7 8,-3.1 -2,-0.6 2,-0.8 -0.874 15.5-144.8-109.8 125.6 74.4 0.2 0.7 52 52 A S E -CD 37 58A 28 -15,-3.0 -15,-1.7 -2,-0.5 6,-0.3 -0.793 25.1-136.4 -87.3 109.9 76.3 3.5 0.7 53 53 A D E > -C 36 0A 5 4,-3.0 3,-2.5 -2,-0.8 -17,-0.3 -0.319 19.4-114.6 -64.6 150.4 75.4 5.4 3.8 54 54 A E T 3 S+ 0 0 113 -19,-2.3 -1,-0.1 1,-0.3 -18,-0.1 0.725 116.7 63.9 -60.6 -21.5 74.6 9.1 3.5 55 55 A T T 3 S- 0 0 93 -20,-0.2 -1,-0.3 2,-0.2 3,-0.1 0.577 125.9-101.4 -77.6 -9.1 77.7 9.8 5.6 56 56 A G S < S+ 0 0 67 -3,-2.5 2,-0.6 1,-0.3 -2,-0.2 0.601 81.2 132.4 98.8 14.6 79.8 8.2 2.8 57 57 A D - 0 0 77 -4,-0.2 -4,-3.0 2,-0.0 2,-0.6 -0.886 48.9-144.3-104.5 117.9 80.3 4.9 4.4 58 58 A I E +D 52 0A 92 -2,-0.6 2,-0.3 -6,-0.3 -6,-0.3 -0.713 29.1 171.1 -83.9 118.2 79.7 1.8 2.3 59 59 A T E -D 51 0A 21 -8,-3.1 -8,-2.7 -2,-0.6 2,-0.4 -0.837 31.7-117.9-124.1 162.1 78.2 -1.0 4.3 60 60 A Y E +D 50 0A 129 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.861 36.8 174.5-104.7 134.9 76.7 -4.4 3.5 61 61 A F E -D 49 0A 1 -12,-2.7 -12,-3.1 -2,-0.4 -13,-1.2 -0.903 23.2-131.9-138.0 163.7 73.1 -5.1 4.4 62 62 A K >> - 0 0 56 -15,-0.3 3,-2.0 -2,-0.3 4,-0.5 -0.752 36.7-102.3-114.2 161.5 70.3 -7.7 4.0 63 63 A E G >4 S+ 0 0 58 1,-0.3 3,-0.7 -2,-0.3 -1,-0.1 0.792 122.6 55.6 -53.4 -30.6 66.7 -7.3 2.9 64 64 A H G 34 S+ 0 0 130 1,-0.2 -1,-0.3 3,-0.0 -41,-0.1 0.726 105.2 52.2 -75.2 -21.5 65.6 -7.6 6.5 65 65 A E G <4 S+ 0 0 20 -3,-2.0 -44,-0.9 -41,-0.1 2,-0.3 0.466 102.6 71.3 -95.1 -2.3 67.9 -4.7 7.6 66 66 A L E << -B 20 0A 6 -3,-0.7 -46,-0.2 -4,-0.5 -48,-0.0 -0.864 55.9-162.5-122.3 150.0 66.6 -2.2 5.0 67 67 A T E -B 19 0A 53 -48,-2.2 -48,-2.8 -2,-0.3 -3,-0.0 -0.988 28.5-120.6-129.9 121.5 63.4 -0.2 4.4 68 68 A P E -B 18 0A 44 0, 0.0 2,-0.3 0, 0.0 -50,-0.3 -0.259 22.8-133.8 -62.7 143.0 62.7 1.3 0.9 69 69 A L - 0 0 54 -52,-2.8 2,-0.4 2,-0.0 -52,-0.2 -0.689 15.4-150.1 -95.3 152.7 62.2 5.0 0.6 70 70 A K - 0 0 190 -2,-0.3 3,-0.1 1,-0.1 -52,-0.0 -0.945 14.3-142.6-126.3 146.6 59.4 6.6 -1.3 71 71 A G - 0 0 87 -2,-0.4 2,-0.3 1,-0.1 -1,-0.1 0.885 46.3-120.1 -74.9 -39.5 59.2 9.9 -3.2 72 72 A G + 0 0 47 1,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.853 42.6 173.3 143.6-104.9 55.7 10.8 -2.3 73 73 A L + 0 0 155 -2,-0.3 5,-0.1 1,-0.1 -1,-0.1 0.711 58.2 108.6 63.6 23.6 52.9 11.3 -4.8 74 74 A A S S+ 0 0 99 1,-0.1 -1,-0.1 -3,-0.1 -2,-0.0 0.498 80.3 37.2-106.1 -9.7 50.6 11.5 -1.8 75 75 A Y S S+ 0 0 220 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 0.328 97.4 100.8-120.6 1.7 49.9 15.2 -2.0 76 76 A V - 0 0 83 2,-0.0 2,-0.7 1,-0.0 -4,-0.0 -0.625 61.6-145.9 -93.1 146.0 49.8 15.5 -5.8 77 77 A L + 0 0 142 -2,-0.3 2,-0.7 3,-0.0 3,-0.3 -0.870 26.2 173.3-110.6 95.4 46.6 15.6 -7.9 78 78 A E + 0 0 131 -2,-0.7 -2,-0.0 1,-0.2 3,-0.0 -0.860 41.6 87.5-112.6 98.0 47.4 13.8 -11.1 79 79 A H S S+ 0 0 181 -2,-0.7 2,-0.4 0, 0.0 -1,-0.2 0.325 88.0 35.6-149.0 -41.2 44.4 13.2 -13.4 80 80 A H + 0 0 163 -3,-0.3 2,-0.4 2,-0.0 -3,-0.0 -0.771 69.7 133.7-131.0 85.9 44.1 16.2 -15.7 81 81 A H - 0 0 135 -2,-0.4 2,-0.7 -3,-0.0 3,-0.1 -0.995 31.8-165.0-131.9 127.6 47.4 17.8 -16.8 82 82 A H - 0 0 152 -2,-0.4 -2,-0.0 1,-0.3 0, 0.0 -0.763 54.7 -74.8-115.4 85.0 48.2 18.8 -20.4 83 83 A H 0 0 193 -2,-0.7 -1,-0.3 1,-0.2 0, 0.0 -0.060 360.0 360.0 61.2-163.7 51.9 19.4 -20.6 84 84 A H 0 0 255 -3,-0.1 -1,-0.2 0, 0.0 -3,-0.0 -0.843 360.0 360.0-113.0 360.0 53.5 22.5 -19.2