==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-AUG-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 03-OCT-12 4HED . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; . AUTHOR D.RAJASEKARAN,C.FAN,W.MENG,J.W.PFLUGRATH,E.J.LOLIS . 70 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5034.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 58.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 18.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 12 A P 0 0 88 0, 0.0 2,-0.8 0, 0.0 33,-0.0 0.000 360.0 360.0 360.0 -25.9 -11.0 4.5 -1.6 2 13 A G + 0 0 88 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.190 360.0 103.6 -84.7 45.2 -13.7 3.0 -3.8 3 14 A V - 0 0 53 -2,-0.8 2,-0.3 2,-0.0 26,-0.0 -0.747 56.5-152.7-125.9 167.9 -12.7 5.4 -6.5 4 15 A a - 0 0 59 -2,-0.2 2,-0.4 25,-0.0 -2,-0.0 -0.873 9.0-161.5-148.8 110.5 -10.7 5.5 -9.8 5 16 A F + 0 0 46 25,-0.4 25,-2.9 -2,-0.3 3,-0.1 -0.782 17.7 170.9-100.2 135.4 -8.9 8.5 -11.2 6 17 A K S S+ 0 0 139 -2,-0.4 2,-0.3 1,-0.2 -1,-0.1 0.440 75.6 43.3-118.0 -10.8 -7.9 8.8 -14.9 7 18 A V S S- 0 0 119 23,-0.1 2,-0.3 37,-0.0 37,-0.2 -0.983 82.1-137.6-130.7 145.4 -6.8 12.4 -14.8 8 19 A L - 0 0 51 -2,-0.3 2,-0.5 -3,-0.1 37,-0.2 -0.753 9.6-121.7-111.6 151.7 -4.7 14.0 -12.0 9 20 A T B +a 45 0A 38 35,-2.8 37,-2.4 -2,-0.3 40,-0.1 -0.750 33.0 164.5 -81.4 127.3 -4.7 17.2 -10.0 10 21 A T + 0 0 81 -2,-0.5 2,-0.4 35,-0.2 -1,-0.1 0.562 48.9 87.7-118.6 -16.8 -1.5 19.1 -10.3 11 22 A K S S- 0 0 173 1,-0.1 38,-0.0 38,-0.1 -2,-0.0 -0.710 87.5-109.5 -82.0 134.4 -2.4 22.5 -9.0 12 23 A E - 0 0 68 -2,-0.4 2,-0.2 1,-0.1 -1,-0.1 -0.458 32.1-129.9 -66.3 124.0 -2.0 22.8 -5.2 13 24 A P - 0 0 15 0, 0.0 4,-0.1 0, 0.0 -1,-0.1 -0.564 9.1-155.1 -78.8 141.6 -5.3 23.1 -3.5 14 25 A K + 0 0 200 -2,-0.2 3,-0.1 2,-0.1 -2,-0.0 0.694 64.1 103.8 -79.9 -24.5 -5.9 25.9 -1.0 15 26 A A S S- 0 0 28 1,-0.1 2,-0.3 22,-0.0 0, 0.0 -0.194 84.0-101.8 -61.0 149.7 -8.6 24.0 0.9 16 27 A N - 0 0 101 1,-0.0 22,-1.7 2,-0.0 2,-0.5 -0.578 35.4-139.0 -68.4 130.8 -7.8 22.4 4.2 17 28 A I E +B 37 0A 14 -2,-0.3 20,-0.3 20,-0.2 3,-0.1 -0.835 23.3 178.3 -98.0 126.6 -7.3 18.6 3.8 18 29 A K E + 0 0 93 18,-2.3 2,-0.3 -2,-0.5 19,-0.2 0.731 66.8 13.2-100.6 -22.0 -8.9 16.4 6.4 19 30 A R E -B 36 0A 97 17,-1.5 17,-2.7 45,-0.1 2,-0.3 -0.989 60.7-171.4-149.2 148.1 -8.0 12.9 5.1 20 31 A b E -B 35 0A 3 45,-0.4 47,-2.4 -2,-0.3 2,-0.4 -0.995 1.6-172.1-144.6 156.5 -5.7 11.4 2.5 21 32 A Y E -Bc 34 67A 38 13,-1.9 13,-3.2 -2,-0.3 2,-0.7 -0.998 25.8-126.8-142.5 137.4 -5.1 8.0 1.0 22 33 A N E -B 33 0A 27 45,-2.7 47,-0.3 -2,-0.4 11,-0.2 -0.784 30.2-156.4 -83.8 115.9 -2.5 6.7 -1.4 23 34 A L E -B 32 0A 18 9,-3.0 9,-1.4 -2,-0.7 2,-0.1 -0.769 13.2-124.7 -96.0 139.7 -4.4 5.1 -4.3 24 35 A P - 0 0 87 0, 0.0 2,-0.3 0, 0.0 -1,-0.0 -0.417 19.5-108.4 -83.0 154.0 -2.6 2.3 -6.3 25 36 A K + 0 0 152 -2,-0.1 2,-0.2 6,-0.1 5,-0.2 -0.622 46.1 169.2 -70.4 136.8 -2.0 2.2 -10.1 26 37 A T - 0 0 62 3,-2.8 5,-0.1 -2,-0.3 -22,-0.0 -0.718 52.7 -83.2-131.9-171.6 -4.2 -0.4 -11.8 27 38 A N S S+ 0 0 166 -2,-0.2 -2,-0.0 1,-0.2 3,-0.0 0.879 129.4 21.2 -63.7 -36.3 -5.0 -1.2 -15.4 28 39 A N S S+ 0 0 118 2,-0.0 2,-0.3 1,-0.0 -1,-0.2 0.514 119.0 64.5-109.5 -9.5 -7.7 1.5 -15.5 29 40 A a S S- 0 0 22 -23,-0.0 -3,-2.8 -26,-0.0 2,-0.3 -0.909 71.7-126.3-123.3 150.0 -6.7 3.8 -12.7 30 41 A L - 0 0 58 -25,-2.9 -25,-0.4 -2,-0.3 2,-0.2 -0.647 28.0-108.2 -92.0 144.7 -3.7 6.1 -12.0 31 42 A K + 0 0 97 -2,-0.3 2,-0.3 -5,-0.1 -6,-0.1 -0.514 59.2 146.4 -62.7 132.5 -1.5 6.1 -8.9 32 43 A c E -B 23 0A 1 -9,-1.4 -9,-3.0 -2,-0.2 2,-0.8 -0.985 53.9-106.7-164.8 162.0 -2.3 9.2 -7.0 33 44 A V E -BD 22 45A 8 12,-2.3 12,-3.1 -2,-0.3 2,-0.5 -0.868 36.2-143.4-100.2 111.2 -2.6 10.8 -3.5 34 45 A L E -BD 21 44A 0 -13,-3.2 -13,-1.9 -2,-0.8 2,-0.5 -0.637 14.3-165.7 -80.0 119.5 -6.3 11.3 -2.8 35 46 A F E -BD 20 43A 2 8,-3.1 8,-2.0 -2,-0.5 2,-0.5 -0.902 3.5-164.0-100.5 131.4 -7.0 14.5 -0.8 36 47 A V E -BD 19 42A 1 -17,-2.7 -18,-2.3 -2,-0.5 -17,-1.5 -0.976 17.0-152.1-112.7 119.6 -10.4 14.8 0.8 37 48 A D E > -B 17 0A 5 4,-2.5 3,-2.3 -2,-0.5 -20,-0.2 -0.262 32.7 -93.7 -88.1 178.0 -11.1 18.4 1.8 38 49 A A T 3 S+ 0 0 67 -22,-1.7 -21,-0.1 1,-0.3 -1,-0.1 0.750 127.7 55.3 -63.9 -20.3 -13.2 19.9 4.6 39 50 A S T 3 S- 0 0 80 -23,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.304 119.5-112.6 -89.7 9.9 -16.1 20.2 2.0 40 51 A N < + 0 0 104 -3,-2.3 2,-0.2 1,-0.2 -2,-0.1 0.647 69.5 146.6 62.8 19.4 -15.7 16.4 1.3 41 52 A R - 0 0 129 1,-0.0 -4,-2.5 2,-0.0 2,-0.4 -0.593 39.7-138.9 -80.7 149.1 -14.5 17.2 -2.2 42 53 A M E + D 0 36A 80 -2,-0.2 2,-0.4 -6,-0.2 -6,-0.2 -0.904 24.1 172.4-110.9 138.6 -11.9 14.8 -3.7 43 54 A K E - D 0 35A 64 -8,-2.0 -8,-3.1 -2,-0.4 2,-0.7 -0.988 21.2-148.3-137.4 130.3 -8.8 15.7 -5.7 44 55 A c E - D 0 34A 1 -2,-0.4 -35,-2.8 -10,-0.2 -10,-0.3 -0.884 21.2-142.8-105.6 112.6 -6.3 13.0 -6.6 45 56 A I E -aD 9 33A 0 -12,-3.1 -12,-2.3 -2,-0.7 -35,-0.2 -0.513 15.9-113.0 -83.0 134.9 -2.8 14.5 -6.7 46 57 A D > - 0 0 44 -37,-2.4 3,-2.3 -2,-0.2 6,-0.2 -0.473 24.8-137.2 -54.1 122.3 -0.1 13.5 -9.2 47 58 A P T 3 S+ 0 0 45 0, 0.0 -1,-0.2 0, 0.0 6,-0.1 0.742 103.6 58.9 -60.1 -17.8 2.6 11.9 -7.0 48 59 A N T 3 S+ 0 0 143 4,-0.1 2,-0.1 3,-0.0 -2,-0.1 0.462 73.3 130.4 -90.8 2.0 5.1 13.8 -9.1 49 60 A A X - 0 0 14 -3,-2.3 3,-1.5 -40,-0.1 4,-0.5 -0.353 60.0-135.3 -60.2 130.1 3.7 17.2 -8.2 50 61 A S T 3 S+ 0 0 122 1,-0.3 4,-0.3 2,-0.1 3,-0.2 0.778 100.6 45.8 -59.1 -32.4 6.6 19.4 -7.0 51 62 A W T 3> S+ 0 0 34 1,-0.2 4,-2.1 2,-0.1 -1,-0.3 0.496 88.4 90.8 -89.9 -6.9 4.7 20.8 -4.0 52 63 A L H <> S+ 0 0 9 -3,-1.5 4,-2.9 1,-0.2 5,-0.2 0.902 80.9 52.5 -66.1 -44.6 3.4 17.5 -2.8 53 64 A A H > S+ 0 0 76 -4,-0.5 4,-2.2 -3,-0.2 -1,-0.2 0.940 113.4 45.0 -55.6 -47.2 6.2 16.5 -0.4 54 65 A E H > S+ 0 0 119 -4,-0.3 4,-2.5 1,-0.2 -1,-0.2 0.899 111.8 52.5 -65.0 -37.7 6.1 19.8 1.4 55 66 A R H X S+ 0 0 26 -4,-2.1 4,-2.5 1,-0.2 -1,-0.2 0.922 109.1 50.0 -65.8 -38.9 2.2 19.7 1.6 56 67 A L H X S+ 0 0 54 -4,-2.9 4,-2.3 2,-0.2 -1,-0.2 0.889 109.4 51.8 -63.2 -41.4 2.4 16.2 3.1 57 68 A Y H X S+ 0 0 142 -4,-2.2 4,-2.2 -5,-0.2 -2,-0.2 0.930 111.7 47.1 -57.2 -47.0 4.9 17.5 5.7 58 69 A R H X S+ 0 0 98 -4,-2.5 4,-0.9 2,-0.2 -2,-0.2 0.883 109.7 52.9 -63.3 -40.3 2.5 20.3 6.5 59 70 A L H ><>S+ 0 0 9 -4,-2.5 5,-2.6 2,-0.2 3,-0.8 0.923 107.8 51.3 -62.9 -40.7 -0.4 18.0 6.8 60 71 A K H ><5S+ 0 0 141 -4,-2.3 3,-2.4 1,-0.3 -2,-0.2 0.932 105.0 55.4 -64.2 -42.6 1.4 15.8 9.2 61 72 A E H 3<5S+ 0 0 137 -4,-2.2 -1,-0.3 1,-0.3 -2,-0.2 0.765 108.2 51.4 -58.9 -20.5 2.2 18.9 11.3 62 73 A K T <<5S- 0 0 146 -4,-0.9 -1,-0.3 -3,-0.8 -2,-0.2 0.270 128.7 -97.2 -99.2 7.2 -1.5 19.4 11.4 63 74 A G T < 5S+ 0 0 68 -3,-2.4 2,-0.5 1,-0.2 -3,-0.2 0.530 85.9 121.5 95.0 11.3 -2.3 15.8 12.6 64 75 A V < + 0 0 25 -5,-2.6 2,-0.4 -6,-0.1 -1,-0.2 -0.928 30.7 172.9-116.8 119.6 -3.1 14.3 9.1 65 76 A T - 0 0 92 -2,-0.5 -45,-0.4 -5,-0.1 2,-0.2 -0.968 34.4-113.8-120.7 139.2 -1.2 11.3 7.7 66 77 A b - 0 0 35 -2,-0.4 -45,-0.3 -47,-0.1 2,-0.1 -0.527 25.9-137.0 -74.4 138.2 -2.2 9.5 4.5 67 78 A R B +c 21 0A 182 -47,-2.4 -45,-2.7 -2,-0.2 -1,-0.1 -0.354 65.2 42.7 -83.3 167.7 -3.4 5.9 4.7 68 79 A G S S- 0 0 58 -47,-0.2 2,-0.3 -2,-0.1 -45,-0.1 0.026 98.9 -52.4 77.7 169.2 -2.2 3.2 2.3 69 80 A E 0 0 185 -47,-0.3 -2,-0.1 1,-0.1 -48,-0.0 -0.633 360.0 360.0 -93.1 143.1 1.3 2.7 0.9 70 81 A A 0 0 89 -2,-0.3 -4,-0.1 -4,-0.1 -1,-0.1 -0.768 360.0 360.0 89.1 360.0 3.5 5.4 -0.8