==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-JUN-06 2HFQ . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: NITROSOMONAS EUROPAEA; . AUTHOR J.R.CORT,A.A.YEE,V.YIM,J.LUKIN,M.A.KENNEDY,NORTHEAST . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5672.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 75.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 19 22.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 25.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 105 0, 0.0 2,-0.6 0, 0.0 62,-0.5 0.000 360.0 360.0 360.0 133.1 12.9 -0.2 -9.5 2 2 A Q E -A 62 0A 115 60,-0.1 2,-0.5 23,-0.1 60,-0.2 -0.856 360.0-145.4-101.3 116.7 11.4 2.6 -7.4 3 3 A I E -A 61 0A 3 58,-1.5 58,-1.4 -2,-0.6 2,-0.8 -0.688 8.7-143.8 -81.8 124.0 9.1 1.6 -4.7 4 4 A H E -AB 60 24A 10 20,-2.8 20,-1.5 -2,-0.5 2,-0.9 -0.812 13.4-147.2 -89.6 110.8 6.3 4.1 -4.1 5 5 A V E -AB 59 23A 8 54,-2.8 53,-2.9 -2,-0.8 2,-0.9 -0.710 14.8-172.2 -85.3 104.7 5.6 4.1 -0.4 6 6 A Y E - B 0 22A 13 16,-2.1 16,-2.7 -2,-0.9 2,-0.6 -0.841 13.7-149.9-100.9 99.2 1.9 4.8 0.2 7 7 A D E - B 0 21A 3 -2,-0.9 49,-1.1 49,-0.5 2,-0.5 -0.558 20.6-161.2 -67.6 111.9 1.3 5.3 3.9 8 8 A T E -CB 55 20A 0 12,-3.3 12,-1.7 -2,-0.6 2,-0.7 -0.863 13.7-155.0-109.4 129.4 -2.2 4.1 4.4 9 9 A Y E + B 0 19A 68 45,-2.9 2,-0.5 -2,-0.5 10,-0.2 -0.895 16.7 173.8-100.3 111.8 -4.5 4.8 7.4 10 10 A V E - B 0 18A 3 8,-2.1 8,-3.3 -2,-0.7 2,-0.9 -0.943 21.5-147.2-118.9 109.6 -7.1 2.2 8.0 11 11 A K - 0 0 123 -2,-0.5 2,-0.2 38,-0.3 38,-0.2 -0.652 13.2-169.4 -84.7 104.7 -9.1 2.9 11.1 12 12 A A - 0 0 29 -2,-0.9 36,-0.1 4,-0.5 33,-0.0 -0.602 24.0-126.8 -82.4 154.6 -10.2 -0.3 12.9 13 13 A K S S- 0 0 202 -2,-0.2 -1,-0.1 34,-0.2 4,-0.1 0.999 87.6 -15.2 -69.6 -67.2 -12.7 0.1 15.7 14 14 A D S S+ 0 0 140 2,-0.1 -1,-0.1 3,-0.0 3,-0.1 0.509 125.9 72.0-118.9 -11.7 -11.2 -1.7 18.7 15 15 A G S S- 0 0 53 1,-0.2 2,-0.2 -4,-0.0 -4,-0.0 0.993 107.8 -71.1 -65.9 -77.3 -8.5 -3.8 17.0 16 16 A H - 0 0 80 -6,-0.1 -4,-0.5 66,-0.0 2,-0.5 -0.851 44.3 -86.4-178.0 145.4 -5.9 -1.1 16.1 17 17 A V - 0 0 72 -2,-0.2 2,-1.5 -6,-0.2 -6,-0.2 -0.502 47.0-132.8 -57.7 114.6 -5.4 1.7 13.7 18 18 A M E +B 10 0A 3 -8,-3.3 -8,-2.1 -2,-0.5 2,-1.0 -0.609 32.1 176.1 -79.5 90.7 -4.0 -0.1 10.7 19 19 A H E +B 9 0A 39 -2,-1.5 63,-2.9 -10,-0.2 2,-0.3 -0.833 19.4 146.8 -99.2 95.2 -1.1 2.0 9.8 20 20 A F E -B 8 0A 1 -12,-1.7 -12,-3.3 -2,-1.0 2,-0.4 -0.946 41.7-130.4-131.5 150.8 0.6 0.2 6.9 21 21 A D E -BD 7 79A 9 58,-1.0 58,-2.2 -2,-0.3 2,-0.7 -0.856 15.9-140.3-105.4 136.3 2.5 1.3 3.9 22 22 A V E -BD 6 78A 0 -16,-2.7 -16,-2.1 -2,-0.4 2,-0.8 -0.858 8.8-151.8 -97.7 114.8 1.7 -0.0 0.4 23 23 A F E +BD 5 77A 28 54,-3.4 54,-2.4 -2,-0.7 2,-0.3 -0.782 35.0 151.4 -84.3 111.8 4.7 -0.8 -1.8 24 24 A T E -BD 4 76A 1 -20,-1.5 -20,-2.8 -2,-0.8 52,-0.2 -0.953 51.3-142.4-140.0 161.3 3.7 -0.4 -5.4 25 25 A D S S+ 0 0 86 50,-0.7 2,-0.1 -2,-0.3 -23,-0.1 0.597 77.8 98.3 -93.0 -16.1 5.1 0.6 -8.7 26 26 A V - 0 0 49 49,-0.3 -2,-0.1 1,-0.1 -22,-0.1 -0.452 62.7-153.8 -75.3 143.1 1.9 2.5 -9.7 27 27 A R + 0 0 218 -2,-0.1 2,-0.6 4,-0.0 -1,-0.1 0.104 58.9 113.4-103.8 22.4 2.0 6.2 -9.2 28 28 A D > - 0 0 42 1,-0.2 4,-1.9 2,-0.0 5,-0.1 -0.844 52.2-160.9-104.4 122.5 -1.8 6.5 -8.8 29 29 A D H > S+ 0 0 101 -2,-0.6 4,-2.0 2,-0.2 -1,-0.2 0.849 97.1 54.0 -65.3 -36.2 -3.2 7.5 -5.4 30 30 A K H > S+ 0 0 115 2,-0.2 4,-3.1 1,-0.2 -1,-0.2 0.915 107.7 50.1 -63.7 -43.9 -6.6 6.0 -6.4 31 31 A K H > S+ 0 0 70 2,-0.2 4,-3.5 1,-0.2 5,-0.3 0.870 106.2 56.4 -60.7 -38.1 -4.9 2.7 -7.1 32 32 A A H X S+ 0 0 1 -4,-1.9 4,-1.8 2,-0.2 -2,-0.2 0.928 111.6 42.8 -58.3 -45.6 -3.2 3.0 -3.7 33 33 A I H X S+ 0 0 29 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.943 115.6 49.4 -62.1 -49.1 -6.7 3.2 -2.2 34 34 A E H X S+ 0 0 80 -4,-3.1 4,-2.7 1,-0.2 5,-0.2 0.924 111.1 47.5 -59.6 -48.3 -8.0 0.5 -4.5 35 35 A F H X S+ 0 0 22 -4,-3.5 4,-2.0 1,-0.2 -1,-0.2 0.884 112.7 50.3 -62.9 -39.0 -5.2 -2.0 -3.7 36 36 A A H X S+ 0 0 0 -4,-1.8 4,-2.7 -5,-0.3 -1,-0.2 0.916 111.6 47.6 -64.5 -43.3 -5.5 -1.3 -0.0 37 37 A K H X S+ 0 0 107 -4,-2.6 4,-2.7 2,-0.2 5,-0.2 0.904 111.0 50.3 -66.9 -41.9 -9.3 -1.9 -0.1 38 38 A Q H X S+ 0 0 98 -4,-2.7 4,-1.3 1,-0.2 -1,-0.2 0.892 113.2 48.0 -60.4 -39.5 -8.9 -5.1 -2.2 39 39 A W H X S+ 0 0 34 -4,-2.0 4,-2.8 -5,-0.2 5,-0.3 0.904 110.0 51.4 -67.6 -43.2 -6.3 -6.2 0.4 40 40 A L H X>S+ 0 0 3 -4,-2.7 4,-2.5 1,-0.2 5,-1.2 0.930 111.2 47.3 -59.4 -47.3 -8.6 -5.3 3.3 41 41 A S H <5S+ 0 0 59 -4,-2.7 -1,-0.2 4,-0.2 -2,-0.2 0.809 112.4 53.2 -63.2 -29.4 -11.5 -7.4 1.8 42 42 A S H <5S+ 0 0 100 -4,-1.3 -2,-0.2 -5,-0.2 -1,-0.2 0.954 115.4 35.8 -71.2 -51.3 -9.0 -10.2 1.3 43 43 A I H <5S- 0 0 69 -4,-2.8 -2,-0.2 -5,-0.1 -3,-0.2 0.769 115.8-109.5 -77.6 -26.5 -7.7 -10.4 4.9 44 44 A G T <5S+ 0 0 62 -4,-2.5 3,-0.3 -5,-0.3 2,-0.2 0.397 89.9 110.6 114.0 0.3 -11.1 -9.6 6.4 45 45 A E < + 0 0 70 -5,-1.2 -4,-0.2 -6,-0.2 -5,-0.1 -0.245 32.4 128.5 -99.7 46.0 -10.4 -6.1 7.7 46 46 A E + 0 0 123 -6,-0.4 2,-2.6 -2,-0.2 -1,-0.2 0.611 38.5 102.4 -75.9 -12.6 -12.7 -4.5 5.1 47 47 A G + 0 0 72 -3,-0.3 2,-0.3 -7,-0.2 -34,-0.2 -0.346 63.6 85.6 -77.9 65.1 -14.6 -2.6 7.8 48 48 A A S S- 0 0 26 -2,-2.6 2,-0.6 -36,-0.1 -36,-0.1 -0.982 72.1-122.0-157.2 154.1 -13.0 0.8 7.3 49 49 A T - 0 0 112 -2,-0.3 2,-0.7 -38,-0.2 -38,-0.3 -0.896 21.4-162.2-104.2 120.9 -13.4 3.8 5.1 50 50 A V + 0 0 15 -2,-0.6 2,-0.2 -40,-0.1 -40,-0.1 -0.897 20.3 163.7-107.0 110.1 -10.5 4.8 3.0 51 51 A T > - 0 0 64 -2,-0.7 4,-2.1 -18,-0.0 3,-0.4 -0.451 58.6 -85.5-108.9-174.0 -10.6 8.4 1.7 52 52 A S T 4 S+ 0 0 93 1,-0.2 -2,-0.0 2,-0.2 -1,-0.0 0.703 131.6 55.3 -65.4 -19.0 -8.1 10.8 0.2 53 53 A E T 4 S+ 0 0 156 1,-0.1 -1,-0.2 3,-0.1 -3,-0.0 0.788 107.4 47.3 -81.9 -29.9 -7.2 11.6 3.8 54 54 A E T 4 S+ 0 0 27 -3,-0.4 -45,-2.9 -46,-0.1 2,-0.4 0.802 101.8 73.1 -82.3 -32.4 -6.6 8.0 4.7 55 55 A C B < +C 8 0A 20 -4,-2.1 2,-0.3 -47,-0.2 -47,-0.2 -0.723 66.8 175.5 -85.2 131.3 -4.4 7.4 1.6 56 56 A R - 0 0 121 -49,-1.1 2,-0.5 -2,-0.4 -49,-0.5 -0.986 25.0-143.0-139.4 143.4 -1.0 9.1 1.9 57 57 A F + 0 0 100 -2,-0.3 -51,-0.2 -51,-0.3 3,-0.1 -0.947 17.7 174.9-110.6 122.0 2.2 9.2 -0.2 58 58 A C - 0 0 47 -53,-2.9 2,-0.3 -2,-0.5 -1,-0.2 0.948 50.1 -77.3 -84.3 -67.6 5.5 9.2 1.6 59 59 A H E -A 5 0A 89 -54,-0.6 -54,-2.8 -56,-0.1 2,-0.4 -0.963 36.3 -89.7-177.2-179.1 8.1 9.0 -1.1 60 60 A S E +A 4 0A 51 -2,-0.3 2,-0.2 -56,-0.2 -56,-0.2 -0.979 47.4 165.0-118.1 130.4 10.0 6.8 -3.5 61 61 A E E -A 3 0A 95 -58,-1.4 -58,-1.5 -2,-0.4 2,-0.0 -0.747 42.9 -62.0-134.5 178.9 13.1 5.0 -2.4 62 62 A K E -A 2 0A 189 -2,-0.2 -60,-0.1 -60,-0.2 -1,-0.1 -0.341 52.3-134.3 -64.3 148.3 15.5 2.2 -3.3 63 63 A A - 0 0 27 -62,-0.5 -1,-0.1 -3,-0.0 2,-0.1 -0.919 5.1-134.6-118.1 124.7 14.0 -1.3 -3.4 64 64 A P > - 0 0 75 0, 0.0 4,-1.6 0, 0.0 3,-0.5 -0.354 34.1-105.8 -66.2 155.6 15.4 -4.5 -1.9 65 65 A D H > S+ 0 0 142 1,-0.2 4,-1.8 2,-0.2 5,-0.2 0.823 116.9 62.8 -53.2 -37.0 15.3 -7.7 -4.0 66 66 A E H > S+ 0 0 148 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.942 106.1 40.4 -54.7 -55.2 12.5 -9.0 -1.9 67 67 A V H > S+ 0 0 9 -3,-0.5 4,-2.7 1,-0.2 5,-0.3 0.775 107.2 65.7 -71.5 -24.9 10.0 -6.3 -2.7 68 68 A I H X S+ 0 0 36 -4,-1.6 4,-1.8 2,-0.2 -1,-0.2 0.952 107.2 40.4 -57.5 -50.2 11.1 -6.3 -6.3 69 69 A E H X S+ 0 0 81 -4,-1.8 4,-2.2 -3,-0.2 5,-0.3 0.928 114.9 52.9 -64.7 -46.1 9.7 -9.8 -6.7 70 70 A A H X>S+ 0 0 15 -4,-1.9 4,-3.1 1,-0.2 5,-0.6 0.935 114.4 38.8 -57.2 -53.2 6.6 -9.1 -4.7 71 71 A I H X5S+ 0 0 6 -4,-2.7 4,-1.0 1,-0.2 -1,-0.2 0.826 114.9 54.9 -71.0 -31.4 5.5 -6.1 -6.6 72 72 A K H <5S+ 0 0 129 -4,-1.8 -1,-0.2 -5,-0.3 -2,-0.2 0.853 119.4 32.4 -68.1 -34.5 6.5 -7.6 -9.9 73 73 A Q H <5S+ 0 0 138 -4,-2.2 -2,-0.2 -5,-0.1 -3,-0.2 0.895 133.4 25.4 -91.1 -46.3 4.4 -10.7 -9.3 74 74 A N H <5S- 0 0 117 -4,-3.1 -3,-0.2 -5,-0.3 -2,-0.1 0.645 96.4-125.0 -96.4 -17.8 1.4 -9.4 -7.2 75 75 A G S <