==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-JUN-06 2HFV . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN RPA1041; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; . AUTHOR A.ELETSKY,H.S.ATREYA,G.LIU,D.SUKUMARAN,M.GARCIA,A.YEE, . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8230.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 53.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 13.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 19 19.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 249 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 106.3 -33.2 29.0 -8.8 2 2 A G - 0 0 76 2,-0.0 3,-0.0 0, 0.0 0, 0.0 0.567 360.0-135.4 117.6 90.0 -29.7 29.4 -7.6 3 3 A S - 0 0 82 1,-0.1 2,-1.2 2,-0.0 0, 0.0 -0.249 38.7 -89.5 -66.6 158.1 -28.8 31.3 -4.4 4 4 A S - 0 0 124 1,-0.1 2,-1.2 2,-0.1 -1,-0.1 -0.574 43.3-169.2 -76.2 97.5 -25.9 33.7 -4.5 5 5 A H + 0 0 150 -2,-1.2 2,-0.6 -3,-0.0 -1,-0.1 -0.736 19.2 160.4 -90.3 93.6 -22.9 31.5 -3.4 6 6 A H + 0 0 163 -2,-1.2 2,-0.2 2,-0.0 -2,-0.1 -0.889 3.8 157.5-123.0 99.3 -20.2 34.1 -2.8 7 7 A H - 0 0 164 -2,-0.6 2,-0.3 2,-0.0 -2,-0.0 -0.699 20.5-156.8-110.5 169.4 -17.3 33.0 -0.7 8 8 A H + 0 0 150 -2,-0.2 2,-0.4 2,-0.0 -2,-0.0 -0.955 15.8 170.2-153.6 130.8 -13.7 34.3 -0.5 9 9 A H - 0 0 163 -2,-0.3 2,-0.7 2,-0.0 -2,-0.0 -0.926 15.7-159.6-143.0 113.1 -10.4 32.9 0.6 10 10 A H + 0 0 167 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.842 28.9 143.5-103.7 112.0 -7.2 34.7 -0.0 11 11 A S + 0 0 90 -2,-0.7 2,-0.3 0, 0.0 -2,-0.0 -0.913 13.0 166.1-150.6 117.9 -4.0 32.7 0.0 12 12 A S + 0 0 126 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.782 23.8 133.9-134.7 88.7 -1.0 33.0 -2.1 13 13 A G + 0 0 66 -2,-0.3 2,-1.7 3,-0.0 3,-0.3 -0.400 13.8 155.9-131.7 58.0 2.0 31.1 -0.8 14 14 A R + 0 0 190 1,-0.2 -2,-0.0 3,-0.0 0, 0.0 -0.580 17.1 138.0 -87.9 76.3 3.4 29.3 -3.9 15 15 A E + 0 0 172 -2,-1.7 2,-1.0 2,-0.0 -1,-0.2 0.545 36.5 104.9 -97.7 -11.3 7.0 28.9 -2.6 16 16 A N + 0 0 77 -3,-0.3 -3,-0.0 1,-0.2 -2,-0.0 -0.621 40.0 168.7 -71.6 104.8 7.3 25.3 -4.0 17 17 A L + 0 0 125 -2,-1.0 -1,-0.2 0, 0.0 2,-0.2 0.386 59.4 39.3-100.2 1.5 9.5 25.9 -7.0 18 18 A Y + 0 0 184 1,-0.1 -2,-0.0 -3,-0.0 -3,-0.0 -0.434 56.5 101.0-129.4-159.7 10.2 22.2 -7.7 19 19 A F - 0 0 129 1,-0.2 2,-1.1 -2,-0.2 -1,-0.1 0.993 37.0-169.0 74.0 75.9 8.5 18.8 -7.6 20 20 A Q + 0 0 203 2,-0.0 2,-0.2 0, 0.0 -1,-0.2 -0.809 60.9 55.2 -91.9 93.5 7.6 17.8 -11.2 21 21 A G - 0 0 46 -2,-1.1 3,-0.1 1,-0.1 0, 0.0 -0.775 64.1-141.9-176.7-134.9 5.5 14.7 -10.5 22 22 A H S S+ 0 0 141 -2,-0.2 52,-2.3 1,-0.2 2,-0.4 0.002 71.8 32.1 177.7 -51.2 2.3 13.9 -8.5 23 23 A L E -A 73 0A 75 50,-0.2 2,-0.3 51,-0.1 -1,-0.2 -0.970 50.2-174.2-134.8 143.4 2.5 10.4 -6.9 24 24 A R E -A 72 0A 85 48,-1.3 48,-1.4 -2,-0.4 2,-0.3 -0.988 30.2-112.7-134.4 148.0 5.1 8.1 -5.4 25 25 A E E +A 71 0A 44 -2,-0.3 46,-0.2 46,-0.2 3,-0.1 -0.568 32.3 172.4 -81.9 136.6 4.9 4.6 -4.1 26 26 A L E - 0 0 0 44,-2.8 68,-3.9 1,-0.4 2,-0.3 0.806 54.9 -26.8-106.8 -65.9 5.4 4.0 -0.4 27 27 A L E -AB 70 93A 2 43,-1.3 43,-3.3 66,-0.2 -1,-0.4 -0.875 49.2-145.0-147.0 177.2 4.5 0.4 0.6 28 28 A R E +A 69 0A 100 64,-0.5 2,-0.3 41,-0.3 41,-0.2 -0.983 24.8 139.0-148.5 154.3 2.5 -2.7 -0.4 29 29 A T E -A 68 0A 23 39,-2.5 39,-2.2 -2,-0.3 -2,-0.0 -0.925 42.0-139.7 178.3 163.6 0.6 -5.5 1.3 30 30 A N + 0 0 81 -2,-0.3 2,-0.5 37,-0.3 36,-0.1 0.346 65.5 119.9-113.9 -0.2 -2.6 -7.6 1.2 31 31 A D > - 0 0 77 1,-0.2 4,-2.6 37,-0.1 5,-0.2 -0.557 53.3-155.3 -73.8 116.5 -3.0 -7.7 4.9 32 32 A A H > S+ 0 0 64 -2,-0.5 4,-1.2 1,-0.2 -1,-0.2 0.824 92.7 50.4 -61.6 -33.8 -6.3 -6.1 5.8 33 33 A V H > S+ 0 0 110 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.943 112.1 45.1 -72.3 -47.5 -5.1 -5.2 9.3 34 34 A L H > S+ 0 0 39 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.900 112.4 53.0 -61.4 -40.8 -1.9 -3.5 8.1 35 35 A L H X S+ 0 0 17 -4,-2.6 4,-1.3 1,-0.2 -1,-0.2 0.796 109.7 49.2 -65.3 -29.2 -3.9 -1.7 5.4 36 36 A S H X S+ 0 0 80 -4,-1.2 4,-2.5 -3,-0.2 -2,-0.2 0.880 111.4 48.9 -76.0 -39.1 -6.3 -0.5 8.1 37 37 A A H X S+ 0 0 45 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.964 114.9 42.5 -64.4 -53.9 -3.4 0.8 10.3 38 38 A V H X S+ 0 0 2 -4,-2.7 4,-2.1 1,-0.2 5,-0.2 0.881 114.6 53.4 -60.5 -38.3 -1.6 2.6 7.5 39 39 A G H X S+ 0 0 14 -4,-1.3 4,-3.0 -5,-0.3 5,-0.3 0.941 108.1 47.9 -62.6 -48.4 -4.9 4.0 6.3 40 40 A A H X S+ 0 0 63 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.840 110.5 54.0 -62.6 -34.7 -6.0 5.4 9.7 41 41 A L H X S+ 0 0 49 -4,-1.9 4,-0.9 2,-0.2 -1,-0.2 0.955 115.3 36.9 -64.6 -51.5 -2.5 7.0 10.1 42 42 A L H <>S+ 0 0 0 -4,-2.1 5,-2.9 2,-0.2 3,-0.3 0.901 119.7 48.5 -70.1 -41.4 -2.7 8.9 6.7 43 43 A D H ><5S+ 0 0 115 -4,-3.0 3,-1.4 -5,-0.2 -2,-0.2 0.886 107.6 55.7 -65.7 -39.4 -6.4 9.6 7.0 44 44 A G H 3<5S+ 0 0 66 -4,-2.4 -1,-0.2 -5,-0.3 -2,-0.2 0.761 110.8 44.5 -66.0 -25.0 -6.0 10.9 10.5 45 45 A A T 3<5S- 0 0 52 -4,-0.9 -1,-0.3 -3,-0.3 -2,-0.2 0.284 113.0-117.8-102.0 8.0 -3.5 13.4 9.4 46 46 A D T < 5 + 0 0 146 -3,-1.4 2,-0.6 1,-0.2 -3,-0.2 0.792 56.1 164.2 61.4 30.6 -5.5 14.4 6.3 47 47 A I < - 0 0 14 -5,-2.9 2,-0.6 -6,-0.2 -1,-0.2 -0.700 44.2-119.7 -85.1 121.2 -2.7 13.2 4.1 48 48 A G + 0 0 27 -2,-0.6 25,-2.9 -3,-0.1 2,-0.2 -0.454 51.1 166.6 -62.6 108.0 -3.7 12.7 0.5 49 49 A H E -C 72 0A 58 -2,-0.6 2,-0.4 23,-0.3 23,-0.3 -0.754 35.3-147.3-126.7 166.6 -3.1 9.1 -0.1 50 50 A L E +C 71 0A 70 21,-3.5 21,-3.1 -2,-0.2 -2,-0.0 -0.900 30.6 150.3-138.6 104.6 -3.9 6.3 -2.5 51 51 A V + 0 0 40 -2,-0.4 2,-1.3 19,-0.2 18,-0.3 0.333 48.7 102.5-110.9 2.4 -4.3 2.7 -1.2 52 52 A L + 0 0 108 1,-0.2 3,-0.1 16,-0.1 -1,-0.1 -0.673 27.0 135.6 -97.2 82.4 -6.8 1.7 -3.9 53 53 A D S S- 0 0 65 -2,-1.3 2,-0.3 1,-0.5 -1,-0.2 0.903 86.0 -21.3 -82.6 -65.8 -4.8 -0.4 -6.4 54 54 A Q - 0 0 116 -3,-0.3 2,-0.5 13,-0.2 -1,-0.5 -0.982 65.3-152.8-139.3 150.0 -7.5 -3.0 -6.8 55 55 A N - 0 0 100 -2,-0.3 2,-0.2 -3,-0.1 3,-0.1 -0.968 7.5-145.5-130.6 118.9 -10.3 -3.9 -4.4 56 56 A M - 0 0 74 -2,-0.5 5,-0.1 10,-0.2 4,-0.1 -0.501 38.3 -92.0 -76.4 147.3 -11.9 -7.3 -4.0 57 57 A S - 0 0 94 -2,-0.2 -1,-0.1 1,-0.1 0, 0.0 -0.225 31.8-116.4 -60.6 151.8 -15.6 -7.4 -3.2 58 58 A I S S+ 0 0 171 1,-0.1 2,-1.7 2,-0.1 3,-0.2 0.420 85.5 110.5 -75.1 3.8 -16.5 -7.6 0.5 59 59 A L S S- 0 0 145 1,-0.2 -1,-0.1 0, 0.0 -2,-0.1 -0.621 107.4 -47.3 -81.3 84.1 -18.1 -11.1 -0.1 60 60 A E S S- 0 0 174 -2,-1.7 -1,-0.2 -4,-0.1 -3,-0.1 0.953 76.2-127.5 50.6 93.6 -15.5 -13.0 1.8 61 61 A G - 0 0 52 -3,-0.2 -3,-0.1 1,-0.1 -1,-0.0 -0.167 20.7-110.3 -66.5 160.6 -12.1 -11.8 0.7 62 62 A S - 0 0 47 1,-0.1 -1,-0.1 4,-0.0 -6,-0.0 -0.059 23.6-110.2 -81.0-174.7 -9.3 -14.1 -0.5 63 63 A L S S- 0 0 165 -32,-0.0 -1,-0.1 1,-0.0 -33,-0.1 0.846 96.5 -25.0 -88.6 -38.0 -6.0 -15.0 1.2 64 64 A G S S+ 0 0 49 3,-0.0 -33,-0.1 -33,-0.0 -1,-0.0 0.084 98.4 110.3-169.9 43.4 -3.7 -13.2 -1.2 65 65 A V S S+ 0 0 106 1,-0.2 -4,-0.0 -35,-0.1 -35,-0.0 0.813 82.9 44.8 -89.4 -34.9 -5.2 -12.7 -4.7 66 66 A I S S- 0 0 48 -36,-0.1 2,-0.3 -12,-0.0 -1,-0.2 -0.873 71.7-176.2-117.9 98.3 -5.7 -9.0 -4.5 67 67 A P - 0 0 67 0, 0.0 -37,-0.3 0, 0.0 2,-0.2 -0.746 12.1-147.9 -92.0 140.7 -2.8 -7.0 -3.0 68 68 A R E -A 29 0A 74 -39,-2.2 -39,-2.5 -2,-0.3 2,-0.4 -0.678 3.2-150.5-104.4 160.6 -3.0 -3.3 -2.5 69 69 A R E -A 28 0A 99 -18,-0.3 2,-0.6 -2,-0.2 -41,-0.3 -0.994 11.4-134.8-133.7 140.8 -0.2 -0.6 -2.6 70 70 A V E +A 27 0A 0 -43,-3.3 -44,-2.8 -2,-0.4 -43,-1.3 -0.845 29.4 165.0-103.6 116.4 -0.0 2.6 -0.7 71 71 A L E -AC 25 50A 16 -21,-3.1 -21,-3.5 -2,-0.6 2,-0.3 -0.824 14.0-161.3-117.8 162.1 0.9 5.8 -2.5 72 72 A V E -AC 24 49A 0 -48,-1.4 -48,-1.3 -2,-0.3 -23,-0.3 -0.918 32.0 -86.6-137.3 167.4 0.6 9.4 -1.4 73 73 A H E > -A 23 0A 79 -25,-2.9 3,-2.0 -2,-0.3 -50,-0.2 -0.549 32.5-128.9 -73.1 137.5 0.6 12.9 -2.9 74 74 A E G > S+ 0 0 20 -52,-2.3 3,-0.7 1,-0.3 4,-0.3 0.632 103.5 80.2 -65.3 -11.1 4.0 14.4 -3.4 75 75 A D G 3 S+ 0 0 129 -53,-0.3 -1,-0.3 1,-0.2 3,-0.1 0.881 116.5 13.7 -55.6 -39.3 2.6 17.4 -1.6 76 76 A D G <> S+ 0 0 80 -3,-2.0 4,-3.3 -28,-0.2 5,-0.3 -0.096 91.5 128.2-129.4 33.8 3.2 15.4 1.6 77 77 A L H <> S+ 0 0 20 -3,-0.7 4,-1.8 1,-0.2 5,-0.2 0.955 83.0 35.4 -56.5 -57.1 5.4 12.7 0.2 78 78 A A H > S+ 0 0 80 -4,-0.3 4,-1.8 1,-0.2 -1,-0.2 0.820 117.7 56.5 -67.3 -30.5 8.2 13.2 2.8 79 79 A G H > S+ 0 0 34 2,-0.2 4,-2.6 1,-0.2 -2,-0.2 0.929 107.0 45.5 -69.0 -46.8 5.6 14.0 5.4 80 80 A A H X S+ 0 0 0 -4,-3.3 4,-2.8 2,-0.2 5,-0.2 0.917 115.9 46.3 -63.6 -44.4 3.5 10.8 5.0 81 81 A R H X S+ 0 0 59 -4,-1.8 4,-1.5 -5,-0.3 -1,-0.2 0.850 111.3 53.8 -67.4 -33.3 6.7 8.6 5.0 82 82 A R H X S+ 0 0 183 -4,-1.8 4,-3.3 -5,-0.2 5,-0.4 0.937 110.9 46.2 -62.0 -47.3 7.9 10.6 8.0 83 83 A L H X S+ 0 0 49 -4,-2.6 4,-2.7 1,-0.2 -2,-0.2 0.953 112.0 49.1 -60.4 -53.2 4.7 9.8 9.8 84 84 A L H <>S+ 0 0 3 -4,-2.8 5,-3.2 1,-0.2 6,-1.1 0.778 119.7 39.7 -60.5 -28.8 4.7 6.1 9.0 85 85 A T H <5S+ 0 0 76 -4,-1.5 -2,-0.2 3,-0.2 -1,-0.2 0.914 122.0 37.8 -85.3 -48.7 8.3 5.9 10.1 86 86 A D H <5S+ 0 0 127 -4,-3.3 -3,-0.2 -5,-0.2 -2,-0.2 0.911 139.9 7.8 -74.2 -43.9 8.3 8.1 13.2 87 87 A A T <5S+ 0 0 62 -4,-2.7 -1,-0.2 -5,-0.4 -3,-0.2 -0.023 125.7 56.4-132.5 30.0 4.9 7.2 14.6 88 88 A G T 5S- 0 0 33 -4,-0.4 -3,-0.2 -6,-0.2 -4,-0.2 0.596 104.5 -84.8-121.4 -80.0 3.7 4.3 12.5 89 89 A L < - 0 0 71 -5,-3.2 -4,-0.2 -51,-0.0 -5,-0.1 0.248 38.4-145.9-167.6 -44.5 5.8 1.2 12.2 90 90 A A + 0 0 37 -6,-1.1 -5,-0.1 -9,-0.0 -9,-0.0 0.961 58.4 104.7 56.0 94.7 8.4 1.6 9.4 91 91 A H S S+ 0 0 152 3,-0.0 -6,-0.0 0, 0.0 -1,-0.0 0.233 70.3 43.0-157.6 -65.0 8.8 -1.8 7.8 92 92 A E S S+ 0 0 89 2,-0.0 -64,-0.5 -65,-0.0 2,-0.3 0.213 78.5 137.6 -87.5 16.9 7.3 -2.4 4.4 93 93 A L B -B 27 0A 44 -66,-0.1 2,-0.3 -9,-0.1 -66,-0.2 -0.474 29.0-178.1 -73.7 126.2 8.5 0.9 3.0 94 94 A R - 0 0 138 -68,-3.9 2,-0.2 -2,-0.3 -2,-0.0 -0.744 16.8-127.3-117.0 166.6 9.9 0.9 -0.5 95 95 A S - 0 0 54 -2,-0.3 2,-1.7 -71,-0.0 -70,-0.0 -0.501 34.1 -91.9-106.8 175.2 11.3 3.7 -2.6 96 96 A D 0 0 100 -2,-0.2 -70,-0.0 1,-0.1 -1,-0.0 -0.595 360.0 360.0 -83.9 72.5 10.7 5.0 -6.2 97 97 A D 0 0 146 -2,-1.7 -1,-0.1 0, 0.0 -3,-0.0 0.469 360.0 360.0 -98.1 360.0 13.4 2.7 -7.5