==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 13-DEC-00 1HG7 . COMPND 2 MOLECULE: HPLC-12 TYPE III ANTIFREEZE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR A.A.ANTSON,D.J.SMITH,D.I.ROPER,S.LEWIS,L.S.D.CAVES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4023.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 53.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1000 A M 0 0 194 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 133.3 19.1 -7.2 -5.3 2 1001 A N + 0 0 121 1,-0.2 2,-0.7 25,-0.1 25,-0.0 0.522 360.0 140.8 67.8 5.0 18.2 -7.1 -1.6 3 1002 A Q - 0 0 129 25,-0.0 25,-0.5 31,-0.0 2,-0.2 -0.741 39.2-149.5 -88.1 113.3 20.8 -4.5 -0.6 4 1003 A A - 0 0 24 -2,-0.7 31,-1.9 23,-0.2 2,-0.3 -0.536 11.3-164.7 -93.1 143.9 19.4 -2.0 1.9 5 1004 A S E -AB 26 34A 0 21,-2.6 21,-1.8 29,-0.3 2,-0.4 -0.809 33.9 -94.5-112.5 160.8 20.2 1.6 2.5 6 1005 A V E -A 25 0A 1 27,-2.5 50,-2.5 50,-0.3 2,-0.4 -0.629 45.1-172.8 -72.2 128.7 19.5 4.0 5.4 7 1006 A V E -AC 24 55A 0 17,-2.3 17,-2.6 -2,-0.4 2,-0.3 -0.980 31.5-103.3-126.1 139.8 16.3 5.9 4.7 8 1007 A A E -A 23 0A 4 46,-2.7 45,-2.5 -2,-0.4 15,-0.2 -0.437 25.8-168.0 -66.0 123.9 14.9 8.8 6.7 9 1008 A N S S+ 0 0 72 13,-2.9 2,-0.3 -2,-0.3 14,-0.2 0.528 77.5 10.5 -87.4 -4.8 12.0 7.6 8.9 10 1009 A Q S S- 0 0 87 12,-0.6 2,-0.3 40,-0.1 43,-0.1 -0.927 103.3 -74.0-154.7 162.9 11.1 11.2 9.7 11 1010 A L - 0 0 103 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.567 48.5-151.8 -57.2 131.3 12.1 14.6 8.4 12 1011 A I B -D 50 0B 1 38,-2.5 38,-2.8 -2,-0.3 3,-0.1 -0.940 13.5-139.2-109.7 106.3 15.6 15.1 9.9 13 1012 A P > - 0 0 60 0, 0.0 3,-1.0 0, 0.0 33,-0.3 -0.245 33.2 -78.1 -66.5 157.7 16.2 18.8 10.3 14 1013 A I T 3 S+ 0 0 101 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.165 113.9 10.0 -48.2 141.9 19.5 20.4 9.5 15 1014 A N T 3 S+ 0 0 77 31,-1.5 2,-0.4 1,-0.2 -1,-0.2 0.819 92.3 145.6 58.0 34.8 22.3 20.0 12.1 16 1015 A T < - 0 0 37 -3,-1.0 30,-1.8 30,-0.2 2,-0.2 -0.897 53.3-118.3-105.6 135.9 20.2 17.4 14.0 17 1016 A A B -E 45 0C 46 -2,-0.4 28,-0.2 28,-0.2 2,-0.2 -0.493 36.5-114.6 -73.6 126.2 22.0 14.5 15.8 18 1017 A L - 0 0 1 26,-2.9 25,-2.9 23,-0.4 2,-0.3 -0.468 34.5-173.5 -68.3 136.3 20.8 11.1 14.3 19 1018 A T > - 0 0 57 23,-0.2 3,-1.7 -2,-0.2 4,-0.4 -0.858 38.3-106.0-119.6 165.5 18.8 8.8 16.5 20 1019 A L G > S+ 0 0 118 -2,-0.3 3,-1.6 1,-0.3 -1,-0.1 0.842 117.1 61.5 -59.8 -35.5 17.6 5.3 15.8 21 1020 A V G 3 S+ 0 0 92 1,-0.3 -1,-0.3 -12,-0.0 3,-0.1 0.696 101.1 56.6 -67.2 -15.2 14.0 6.4 15.4 22 1021 A M G < S+ 0 0 22 -3,-1.7 -13,-2.9 1,-0.1 2,-0.6 0.566 96.8 71.1 -83.3 -15.4 15.1 8.5 12.4 23 1022 A M E < +A 8 0A 16 -3,-1.6 -15,-0.2 -4,-0.4 2,-0.2 -0.882 51.9 164.6-121.4 99.3 16.7 5.7 10.4 24 1023 A R E -A 7 0A 121 -17,-2.6 -17,-2.3 -2,-0.6 2,-0.4 -0.477 29.0-128.7 -90.3 174.5 14.8 3.0 8.7 25 1024 A S E +A 6 0A 63 -19,-0.2 2,-0.3 -2,-0.2 -19,-0.2 -0.992 29.5 163.9-128.7 149.0 16.2 0.7 6.0 26 1025 A E E -A 5 0A 69 -21,-1.8 -21,-2.6 -2,-0.4 2,-0.9 -0.984 43.5-108.7-154.9 148.7 14.8 -0.1 2.6 27 1026 A V + 0 0 87 -2,-0.3 2,-0.3 -23,-0.2 -23,-0.2 -0.754 61.0 149.7 -85.0 104.4 16.1 -1.6 -0.6 28 1027 A V - 0 0 36 -2,-0.9 4,-0.1 -25,-0.5 -2,-0.0 -0.888 40.0 -97.2-132.3 162.3 16.3 1.4 -2.9 29 1028 A T S S+ 0 0 130 -2,-0.3 2,-0.2 2,-0.1 26,-0.1 -0.985 99.1 42.6-125.9 142.9 18.2 2.7 -5.9 30 1029 A P S S- 0 0 103 0, 0.0 2,-0.4 0, 0.0 -2,-0.1 0.662 98.3-122.6 -63.3 160.2 20.5 4.6 -5.9 31 1030 A V - 0 0 83 -2,-0.2 -2,-0.1 1,-0.1 -27,-0.1 -0.638 33.4-175.6 -79.1 128.8 22.2 2.9 -3.0 32 1031 A G - 0 0 8 -2,-0.4 25,-0.2 1,-0.3 -1,-0.1 0.018 51.3 -27.2 -98.1-156.3 23.0 5.2 0.0 33 1032 A I S S- 0 0 0 23,-3.0 -27,-2.5 -27,-0.2 -1,-0.3 -0.417 82.1-104.7 -57.9 132.4 24.8 4.5 3.2 34 1033 A P B > -B 5 0A 46 0, 0.0 3,-2.4 0, 0.0 -29,-0.3 -0.305 19.5-122.8 -64.8 145.2 24.4 0.8 4.0 35 1034 A A G > S+ 0 0 15 -31,-1.9 3,-2.0 1,-0.3 -30,-0.1 0.819 108.7 68.4 -53.0 -34.3 22.0 -0.2 6.6 36 1035 A E G 3 S+ 0 0 130 -32,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.690 91.3 63.7 -62.4 -18.1 24.7 -2.0 8.5 37 1036 A D G <> + 0 0 28 -3,-2.4 4,-1.7 1,-0.2 3,-0.5 0.369 69.1 103.6 -86.1 -1.1 26.3 1.4 9.2 38 1037 A I H <> S+ 0 0 24 -3,-2.0 4,-1.2 1,-0.2 3,-0.2 0.904 76.2 55.2 -49.5 -45.2 23.3 2.7 11.3 39 1038 A P H >4 S+ 0 0 95 0, 0.0 3,-0.5 0, 0.0 -1,-0.2 0.910 107.2 51.0 -56.5 -40.3 25.1 2.2 14.6 40 1039 A R H 34 S+ 0 0 185 -3,-0.5 -2,-0.2 1,-0.2 4,-0.1 0.880 107.8 54.8 -63.1 -34.9 28.0 4.3 13.4 41 1040 A L H >< S+ 0 0 0 -4,-1.7 3,-2.4 -3,-0.2 -23,-0.4 0.747 77.6 113.4 -73.3 -25.4 25.6 7.1 12.4 42 1041 A V T << S+ 0 0 56 -4,-1.2 -23,-0.2 -3,-0.5 3,-0.1 -0.308 89.6 8.7 -59.0 128.8 23.9 7.4 15.8 43 1042 A S T 3 S+ 0 0 90 -25,-2.9 -1,-0.3 1,-0.3 2,-0.2 0.164 98.2 122.7 84.6 -11.8 24.7 10.9 17.2 44 1043 A M < - 0 0 49 -3,-2.4 -26,-2.9 -27,-0.1 2,-0.4 -0.505 61.6-121.9 -73.9 148.8 26.3 12.1 14.0 45 1044 A Q B -E 17 0C 75 17,-0.3 17,-3.1 -28,-0.2 -28,-0.2 -0.733 10.5-129.8 -97.1 143.9 24.7 15.3 12.6 46 1045 A V B -F 61 0D 0 -30,-1.8 -31,-1.5 -2,-0.4 15,-0.3 -0.563 11.0-145.1 -78.7 151.2 23.1 15.7 9.2 47 1046 A N S S+ 0 0 58 13,-2.3 2,-0.3 -2,-0.2 14,-0.1 0.341 78.3 21.8-103.7 12.5 24.4 18.8 7.4 48 1047 A R S S- 0 0 99 12,-0.4 2,-0.2 -35,-0.2 -32,-0.2 -0.956 98.7 -75.9-163.7 160.4 21.1 19.6 5.6 49 1048 A A - 0 0 56 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.525 43.0-154.0 -64.7 133.1 17.4 18.9 6.1 50 1049 A V B -D 12 0B 2 -38,-2.8 -38,-2.5 -2,-0.2 -40,-0.1 -0.930 13.8-137.5-113.1 106.3 16.7 15.3 5.0 51 1050 A P > - 0 0 73 0, 0.0 3,-2.0 0, 0.0 -43,-0.3 -0.190 35.3 -81.6 -58.3 152.7 13.1 14.9 3.9 52 1051 A L T 3 S+ 0 0 121 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.197 117.4 19.5 -49.8 135.0 11.0 11.9 4.9 53 1052 A G T 3 S+ 0 0 44 -45,-2.5 2,-0.3 1,-0.3 -1,-0.3 0.462 89.8 139.1 81.1 1.1 11.8 8.9 2.8 54 1053 A T < - 0 0 37 -3,-2.0 -46,-2.7 -4,-0.1 2,-0.4 -0.599 57.3-118.2 -78.1 139.8 15.1 10.2 1.5 55 1054 A T B -C 7 0A 27 -2,-0.3 2,-0.5 -48,-0.2 -48,-0.2 -0.656 30.3-124.2 -74.8 127.7 18.0 7.9 1.1 56 1055 A L - 0 0 2 -50,-2.5 -23,-3.0 -2,-0.4 -50,-0.3 -0.623 30.8-163.5 -81.1 123.7 20.8 9.0 3.4 57 1056 A M > - 0 0 48 -2,-0.5 3,-2.3 -25,-0.2 4,-0.3 -0.716 31.5-108.9-107.4 158.6 24.0 9.6 1.4 58 1057 A P G > S+ 0 0 64 0, 0.0 3,-0.8 0, 0.0 6,-0.3 0.790 116.6 56.9 -57.0 -32.2 27.6 9.9 2.6 59 1058 A D G 3 S+ 0 0 98 1,-0.2 4,-0.1 4,-0.1 -12,-0.0 0.449 96.7 66.2 -81.0 2.6 27.8 13.6 1.8 60 1059 A M G < S+ 0 0 24 -3,-2.3 -13,-2.3 -14,-0.1 2,-0.5 0.490 89.0 72.1 -98.3 -8.5 24.7 14.3 4.1 61 1060 A V B X S-F 46 0D 5 -3,-0.8 3,-2.0 -4,-0.3 -15,-0.2 -0.953 87.9-114.3-119.1 121.7 26.4 13.4 7.4 62 1061 A K T 3 S- 0 0 84 -17,-3.1 -17,-0.3 -2,-0.5 -2,-0.1 -0.348 96.6 -4.3 -57.9 127.1 29.0 15.7 9.0 63 1062 A G T 3 S+ 0 0 80 1,-0.2 -1,-0.3 -2,-0.1 2,-0.2 0.536 92.7 157.6 73.0 6.5 32.3 13.9 9.1 64 1063 A Y < + 0 0 34 -3,-2.0 2,-0.3 -6,-0.3 -1,-0.2 -0.467 9.4 161.6 -73.2 136.9 31.1 10.7 7.7 65 1064 A A 0 0 82 -2,-0.2 -6,-0.0 -6,-0.0 0, 0.0 -0.981 360.0 360.0-145.2 140.2 33.4 8.3 6.1 66 1065 A A 0 0 129 -2,-0.3 -33,-0.0 0, 0.0 -29,-0.0 -0.282 360.0 360.0 -62.7 360.0 32.8 4.6 5.4