==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 27-JUN-06 2HGN . COMPND 2 MOLECULE: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN F; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.DOMINGUEZ,F.H.-T.ALLAIN . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4581.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 55.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 12.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 14.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 287 A T 0 0 138 0, 0.0 2,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 -51.0 -6.2 13.3 5.9 2 288 A G - 0 0 23 1,-0.4 48,-0.2 48,-0.0 78,-0.0 -0.467 360.0 -48.9-132.9-158.5 -2.5 12.2 6.5 3 289 A H - 0 0 0 46,-2.7 -1,-0.4 78,-0.3 2,-0.3 -0.210 63.7-138.9 -50.1 175.3 0.8 11.5 4.8 4 290 A C - 0 0 32 44,-0.2 72,-1.5 -3,-0.1 2,-0.3 -0.988 21.0-169.1-151.3 159.7 0.4 9.2 1.8 5 291 A V E -AB 47 75A 0 42,-2.1 42,-1.8 -2,-0.3 70,-0.2 -0.999 17.2-137.7-139.1 136.5 2.0 6.2 -0.0 6 292 A H E -AB 46 74A 43 68,-2.8 68,-2.1 -2,-0.3 2,-0.3 -0.527 13.5-171.0-102.6 155.0 1.3 4.7 -3.5 7 293 A M - 0 0 0 38,-1.8 2,-0.4 66,-0.2 38,-0.3 -0.985 3.1-178.4-146.0 126.4 1.1 1.1 -4.7 8 294 A R + 0 0 117 -2,-0.3 64,-2.8 64,-0.3 36,-0.2 -0.996 64.0 39.3-133.1 133.3 0.9 -0.4 -8.3 9 295 A G S S+ 0 0 32 34,-1.9 34,-0.4 33,-1.6 33,-0.2 0.489 70.5 175.0 119.6 11.6 0.5 -4.0 -9.2 10 296 A L - 0 0 4 33,-2.0 33,-0.3 32,-0.5 32,-0.3 -0.112 24.1-119.0 -59.5 148.6 -1.9 -5.3 -6.5 11 297 A P > - 0 0 5 0, 0.0 3,-2.0 0, 0.0 30,-0.2 -0.126 31.2 -89.1 -81.2 175.5 -3.3 -8.9 -6.6 12 298 A Y T 3 S+ 0 0 164 1,-0.3 29,-0.1 28,-0.1 -2,-0.0 0.441 125.1 53.4 -64.8 -0.8 -6.9 -10.5 -6.9 13 299 A K T 3 S+ 0 0 74 2,-0.1 -1,-0.3 27,-0.0 27,-0.1 0.134 77.6 144.7-118.9 14.7 -7.2 -10.4 -3.1 14 300 A A < + 0 0 4 -3,-2.0 2,-0.3 25,-0.1 3,-0.1 -0.346 15.0 158.6 -53.7 128.7 -6.4 -6.6 -2.6 15 301 A T > - 0 0 61 -2,-0.1 4,-2.6 1,-0.1 5,-0.2 -0.947 52.9-106.8-140.5 160.4 -8.4 -4.8 0.2 16 302 A E H > S+ 0 0 71 -2,-0.3 4,-1.7 1,-0.2 5,-0.2 0.952 123.3 40.9 -53.8 -49.9 -7.6 -1.6 2.0 17 303 A N H > S+ 0 0 78 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.879 112.4 57.7 -71.3 -31.7 -6.7 -3.5 5.2 18 304 A D H > S+ 0 0 26 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.954 108.8 45.0 -55.0 -51.6 -4.8 -6.1 3.1 19 305 A I H X S+ 0 0 0 -4,-2.6 4,-1.8 1,-0.2 -2,-0.2 0.873 116.5 41.3 -70.4 -38.6 -2.6 -3.5 1.6 20 306 A Y H X S+ 0 0 57 -4,-1.7 4,-1.2 2,-0.2 6,-0.6 0.819 108.7 57.2 -87.1 -26.6 -1.6 -1.5 4.6 21 307 A N H < S+ 0 0 93 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.695 112.6 43.6 -75.4 -17.9 -1.1 -4.4 7.1 22 308 A F H < S+ 0 0 28 -4,-1.0 -2,-0.2 -5,-0.2 -1,-0.2 0.833 99.3 67.4 -88.4 -37.3 1.5 -5.8 4.6 23 309 A F H < S- 0 0 0 -4,-1.8 37,-0.4 1,-0.2 -2,-0.2 0.855 134.1 -69.4 -44.8 -42.3 3.1 -2.3 4.0 24 310 A S < - 0 0 19 -4,-1.2 2,-1.5 2,-0.1 -1,-0.2 -0.835 63.3 -60.6-177.4-172.2 3.9 -3.1 7.7 25 311 A P S S+ 0 0 133 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 -0.023 93.1 143.0 -58.2 31.3 2.1 -3.5 11.1 26 312 A L - 0 0 15 -2,-1.5 -2,-0.1 -6,-0.6 -3,-0.0 -0.090 53.6-132.5 -73.2 172.2 1.2 0.3 10.4 27 313 A N - 0 0 117 -6,-0.0 23,-0.5 23,-0.0 2,-0.2 -0.779 16.1-161.2-134.5 85.7 -1.9 2.4 11.1 28 314 A P - 0 0 20 0, 0.0 21,-0.3 0, 0.0 3,-0.1 -0.502 15.9-146.4 -53.9 128.1 -3.1 4.6 8.1 29 315 A V S S+ 0 0 79 19,-1.5 2,-0.3 -2,-0.2 20,-0.2 0.527 87.0 6.6 -76.4 -9.4 -5.3 7.3 9.3 30 316 A R E -C 48 0A 110 18,-1.9 18,-2.7 2,-0.0 2,-0.3 -0.959 66.1-161.5-159.2 161.8 -7.0 6.7 6.0 31 317 A V E -C 47 0A 30 -2,-0.3 2,-0.4 16,-0.2 16,-0.2 -0.995 7.1-164.5-136.8 148.8 -7.0 4.3 2.9 32 318 A H E -C 46 0A 54 14,-2.5 14,-1.5 -2,-0.3 2,-0.5 -0.991 13.6-159.6-123.3 125.8 -8.2 4.5 -0.7 33 319 A I + 0 0 58 -2,-0.4 2,-0.4 12,-0.2 -17,-0.1 -0.908 18.0 177.4-108.6 119.2 -8.3 1.1 -2.4 34 320 A E + 0 0 103 -2,-0.5 10,-3.0 -19,-0.1 2,-0.2 -0.996 10.1 133.5-145.3 129.0 -8.4 1.4 -6.2 35 321 A I - 0 0 24 -2,-0.4 7,-0.2 8,-0.3 -2,-0.0 -0.833 59.4 -65.9-157.9 172.7 -8.3 -1.2 -9.0 36 322 A G S S- 0 0 49 5,-2.3 -1,-0.2 -2,-0.2 6,-0.1 0.977 106.8 -23.2 -38.1 -92.8 -9.7 -2.5 -12.3 37 323 A P S S- 0 0 101 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 0.895 127.0 -19.2 -98.7 -55.2 -13.4 -3.5 -11.5 38 324 A D S S- 0 0 118 -4,-0.1 -2,-0.0 0, 0.0 -4,-0.0 0.187 114.3 -55.7-152.4 6.3 -14.2 -4.3 -7.8 39 325 A G S S+ 0 0 12 2,-0.1 -25,-0.1 -24,-0.0 3,-0.1 0.758 112.6 92.1 108.3 36.0 -10.8 -5.1 -5.9 40 326 A R + 0 0 117 1,-0.2 2,-0.4 -27,-0.1 -28,-0.1 0.339 68.2 72.7-132.8 -0.5 -9.3 -7.9 -8.1 41 327 A V S S- 0 0 64 -30,-0.2 -5,-2.3 -29,-0.1 -1,-0.2 -0.956 102.4 -46.7-151.4 122.1 -7.1 -6.3 -10.7 42 328 A T S S- 0 0 80 -2,-0.4 -33,-1.6 -32,-0.3 -32,-0.5 0.258 76.2-146.6 48.0 -0.7 -3.7 -4.6 -11.2 43 329 A G - 0 0 0 -34,-0.4 -33,-2.0 -33,-0.3 -34,-1.9 0.651 24.9-171.8 -25.4 151.9 -4.4 -2.3 -8.2 44 330 A E + 0 0 67 -10,-3.0 -36,-0.2 -36,-0.2 -1,-0.1 -0.515 27.4 154.6-152.5 37.1 -3.3 1.2 -8.0 45 331 A A - 0 0 0 -38,-0.3 -38,-1.8 -11,-0.1 2,-0.3 -0.206 31.6-147.6 -98.4 170.6 -4.0 2.6 -4.6 46 332 A D E -AC 6 32A 34 -14,-1.5 -14,-2.5 -40,-0.2 2,-0.4 -0.994 10.7-160.2-142.0 150.8 -2.9 5.2 -2.0 47 333 A V E -AC 5 31A 0 -42,-1.8 -42,-2.1 -2,-0.3 2,-0.5 -0.978 13.0-135.4-143.0 139.8 -2.8 5.1 1.8 48 334 A E E + C 0 30A 23 -18,-2.7 -18,-1.9 -2,-0.4 -19,-1.5 -0.875 31.0 179.2-117.5 116.2 -2.7 7.9 4.3 49 335 A F - 0 0 2 -2,-0.5 -46,-2.7 -21,-0.3 2,-1.5 -0.551 44.2 -89.1-118.2 170.4 -0.4 7.6 7.3 50 336 A A S > S- 0 0 54 -23,-0.5 4,-0.6 -2,-0.2 3,-0.1 -0.446 93.0 -59.2 -79.1 56.8 1.0 9.1 10.5 51 337 A T H > - 0 0 45 -2,-1.5 4,-2.5 2,-0.2 3,-0.3 0.059 67.3 -61.0 114.2 175.4 3.8 10.8 8.6 52 338 A H H > S+ 0 0 66 29,-0.4 4,-2.8 1,-0.2 5,-0.3 0.912 133.8 58.0 -53.4 -35.4 6.8 10.3 6.4 53 339 A E H > S+ 0 0 145 2,-0.2 4,-1.0 1,-0.2 -2,-0.2 0.858 107.6 42.9 -64.6 -38.3 8.0 8.3 9.4 54 340 A E H X S+ 0 0 44 -4,-0.6 4,-0.8 -3,-0.3 -1,-0.2 0.930 121.4 42.7 -66.3 -42.5 5.0 5.9 9.4 55 341 A A H X S+ 0 0 0 -4,-2.5 4,-0.8 2,-0.2 -2,-0.2 0.765 110.5 53.0 -78.6 -30.1 5.2 5.6 5.6 56 342 A V H < S+ 0 0 60 -4,-2.8 -1,-0.2 2,-0.3 -3,-0.2 0.755 103.9 57.7 -79.0 -26.8 9.0 5.3 5.3 57 343 A A H < S+ 0 0 44 -4,-1.0 3,-0.3 -5,-0.3 -2,-0.2 0.817 103.2 53.7 -69.3 -26.3 8.7 2.4 7.8 58 344 A A H >< S+ 0 0 0 -4,-0.8 2,-1.7 1,-0.2 3,-0.7 0.828 95.2 71.3 -65.5 -33.6 6.4 1.1 5.0 59 345 A M T 3< S+ 0 0 56 -4,-0.8 -1,-0.2 1,-0.2 -3,-0.1 -0.258 79.3 85.7 -75.5 47.1 9.5 1.7 2.7 60 346 A S T 3 S+ 0 0 82 -2,-1.7 -1,-0.2 -37,-0.4 -2,-0.1 0.488 97.1 16.2-128.7 -10.9 11.3 -1.3 4.3 61 347 A K < + 0 0 36 -3,-0.7 2,-0.2 -38,-0.2 -2,-0.1 0.410 64.3 169.0-155.3 -9.5 10.2 -4.5 2.5 62 348 A D + 0 0 77 -4,-0.4 2,-2.2 1,-0.2 9,-0.4 0.146 68.0 64.8 20.2 -70.8 8.5 -3.7 -0.9 63 349 A R S S+ 0 0 136 -2,-0.2 6,-0.4 1,-0.2 -1,-0.2 -0.048 80.2 103.4 -52.7 23.5 8.3 -7.3 -2.5 64 350 A A + 0 0 33 -2,-2.2 -1,-0.2 4,-0.2 6,-0.2 0.008 58.7 50.1-130.1 24.6 5.9 -8.5 0.2 65 351 A N S S+ 0 0 17 4,-2.1 2,-1.7 -3,-0.2 3,-0.4 0.694 79.5 76.2-124.5 -57.5 2.2 -8.9 -0.6 66 352 A M S S- 0 0 55 3,-1.6 -1,-0.1 1,-0.3 4,-0.1 -0.480 129.4 -48.2 -90.6 81.8 1.3 -10.8 -3.7 67 353 A Q S S- 0 0 97 -2,-1.7 -1,-0.3 2,-0.1 3,-0.1 0.833 120.1 -45.9 64.3 35.1 1.8 -14.5 -2.9 68 354 A H S S+ 0 0 121 -3,-0.4 2,-0.2 1,-0.3 -4,-0.2 0.968 122.8 99.8 51.1 93.9 5.2 -13.2 -1.5 69 355 A R - 0 0 158 -6,-0.4 -4,-2.1 -7,-0.1 -3,-1.6 -0.879 64.9 -50.1 158.2 175.3 6.1 -11.0 -4.5 70 356 A Y + 0 0 92 -2,-0.2 2,-0.3 -5,-0.2 -7,-0.2 -0.392 26.7 173.2-117.7 153.1 6.1 -7.4 -5.4 71 357 A I - 0 0 0 -9,-0.4 2,-2.0 -2,-0.1 -62,-0.2 -0.971 47.8-101.7-139.3 144.8 4.2 -4.1 -5.7 72 358 A E - 0 0 94 -64,-2.8 2,-0.7 -2,-0.3 -64,-0.3 -0.495 48.7-178.7 -69.6 76.4 5.4 -0.6 -6.7 73 359 A L + 0 0 3 -2,-2.0 2,-0.3 -66,-0.2 -66,-0.2 -0.780 13.1 154.7 -86.8 112.9 5.5 0.7 -3.1 74 360 A F E -B 6 0A 110 -68,-2.1 -68,-2.8 -2,-0.7 -18,-0.0 -0.992 38.8-121.8-149.9 132.3 6.6 4.4 -3.0 75 361 A L E +B 5 0A 50 -2,-0.3 -70,-0.2 -70,-0.2 -23,-0.0 -0.251 20.8 175.5 -60.9 155.4 6.3 7.6 -0.9 76 362 A N + 0 0 80 -72,-1.5 2,-0.2 -2,-0.0 -71,-0.1 0.032 55.5 72.9-149.3 26.2 4.7 10.8 -2.2 77 363 A S - 0 0 30 -73,-0.1 -74,-0.1 4,-0.1 -2,-0.0 -0.831 59.8-139.9-152.2-176.7 4.7 13.0 1.0 78 364 A T - 0 0 111 -2,-0.2 -75,-0.0 -3,-0.0 -3,-0.0 0.348 49.0 -95.3-138.3 -4.6 6.8 15.0 3.4 79 365 A T S S+ 0 0 83 2,-0.8 -76,-0.0 0, 0.0 -29,-0.0 0.791 107.9 95.4 55.3 36.4 6.1 14.9 7.3 80 366 A G 0 0 79 -78,-0.0 -78,-0.0 0, 0.0 -77,-0.0 -0.080 360.0 360.0-144.7 39.5 4.1 18.0 6.7 81 367 A A 0 0 44 -32,-0.1 -2,-0.8 -80,-0.0 -29,-0.4 -0.986 360.0 360.0 -89.2 360.0 2.3 15.5 6.7