==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 27-JUN-06 2HH3 . COMPND 2 MOLECULE: KH-TYPE SPLICING REGULATORY PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.F.GARCIA-MAYORAL . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4494.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 77.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 16.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 39.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 12 A G 0 0 73 0, 0.0 2,-0.4 0, 0.0 49,-0.3 0.000 360.0 360.0 360.0-157.9 2.1 -10.7 5.3 2 13 A I E -A 49 0A 51 47,-2.5 47,-2.2 54,-0.1 2,-0.7 -0.952 360.0-137.8-128.1 143.0 1.0 -7.4 6.9 3 14 A D E -A 48 0A 83 -2,-0.4 45,-0.2 45,-0.2 43,-0.0 -0.895 32.7-171.5 -97.6 114.1 -2.3 -5.5 7.1 4 15 A V E -A 47 0A 23 43,-2.4 43,-3.2 -2,-0.7 2,-0.3 -0.907 24.4-118.8-119.1 132.5 -1.4 -1.9 6.6 5 16 A P E +A 46 0A 57 0, 0.0 41,-0.2 0, 0.0 35,-0.1 -0.497 32.4 177.9 -66.9 124.4 -3.6 1.3 7.0 6 17 A V E -A 45 0A 0 39,-3.1 39,-3.4 -2,-0.3 5,-0.1 -0.945 31.7-118.8-132.0 111.6 -3.9 3.2 3.7 7 18 A P E >> -A 44 0A 13 0, 0.0 4,-1.9 0, 0.0 3,-1.7 -0.177 11.8-136.5 -52.8 133.6 -6.1 6.3 3.7 8 19 A R T 34 S+ 0 0 121 35,-2.7 4,-0.2 1,-0.3 36,-0.1 0.662 109.8 53.8 -66.9 -15.8 -9.0 6.1 1.2 9 20 A H T 34 S+ 0 0 180 34,-0.5 -1,-0.3 1,-0.1 4,-0.1 0.580 113.0 43.2 -88.5 -13.3 -8.2 9.7 0.3 10 21 A S T X> S+ 0 0 3 -3,-1.7 4,-1.6 2,-0.1 3,-1.5 0.638 89.2 82.3-107.7 -20.6 -4.6 8.6 -0.4 11 22 A V H 3X S+ 0 0 21 -4,-1.9 4,-2.9 1,-0.3 5,-0.3 0.759 81.7 70.0 -58.5 -24.7 -5.1 5.4 -2.3 12 23 A G H 3> S+ 0 0 52 1,-0.2 4,-1.9 -4,-0.2 -1,-0.3 0.887 103.4 41.2 -58.2 -38.9 -5.6 7.5 -5.3 13 24 A V H <4 S+ 0 0 70 -3,-1.5 -2,-0.2 2,-0.2 -1,-0.2 0.873 114.8 51.3 -76.2 -38.5 -1.9 8.4 -5.3 14 25 A V H < S+ 0 0 0 -4,-1.6 -2,-0.2 1,-0.2 11,-0.2 0.869 117.3 39.1 -67.3 -37.9 -0.9 4.8 -4.4 15 26 A I H X S+ 0 0 50 -4,-2.9 6,-1.4 1,-0.2 7,-0.7 0.871 83.1 177.7 -79.7 -38.1 -2.9 3.4 -7.3 16 27 A G T < - 0 0 41 -4,-1.9 2,-0.4 -5,-0.3 -1,-0.2 -0.607 61.4 -17.7 70.1-119.8 -2.1 6.1 -9.8 17 28 A R T >4 S- 0 0 194 -2,-0.5 3,-2.7 -4,-0.1 4,-0.3 -0.987 136.4 -9.9-120.9 131.7 -3.9 5.1 -13.0 18 29 A S T 34 S- 0 0 112 -2,-0.4 -2,-0.1 1,-0.3 -1,-0.1 0.382 117.9 -74.3 70.3 -5.4 -5.0 1.5 -13.6 19 30 A G T 3X S+ 0 0 5 -4,-0.6 4,-2.1 -7,-0.1 -1,-0.3 0.576 99.7 137.4 85.9 12.7 -3.1 0.6 -10.4 20 31 A E H <> + 0 0 130 -3,-2.7 4,-1.8 1,-0.2 -4,-0.2 0.873 68.1 50.6 -59.5 -39.6 0.0 1.0 -12.6 21 32 A M H > S+ 0 0 84 -6,-1.4 4,-1.7 -4,-0.3 -1,-0.2 0.931 111.2 46.1 -65.9 -46.2 1.8 2.8 -9.8 22 33 A I H > S+ 0 0 11 -7,-0.7 4,-2.7 1,-0.2 -1,-0.2 0.798 110.2 55.3 -70.4 -26.4 1.0 0.2 -7.2 23 34 A K H X S+ 0 0 122 -4,-2.1 4,-2.1 -8,-0.3 -1,-0.2 0.874 105.4 52.5 -68.6 -37.1 2.1 -2.5 -9.7 24 35 A K H X S+ 0 0 109 -4,-1.8 4,-2.4 2,-0.2 -2,-0.2 0.842 110.0 49.0 -66.2 -34.4 5.4 -0.6 -9.9 25 36 A I H X S+ 0 0 9 -4,-1.7 4,-2.8 2,-0.2 5,-0.4 0.968 112.4 46.0 -65.2 -54.0 5.6 -0.8 -6.1 26 37 A Q H X>S+ 0 0 24 -4,-2.7 4,-1.5 1,-0.2 5,-1.3 0.810 113.5 53.6 -57.5 -31.7 4.8 -4.5 -6.1 27 38 A N H <5S+ 0 0 116 -4,-2.1 -2,-0.2 3,-0.2 -1,-0.2 0.968 114.5 35.6 -68.0 -55.3 7.4 -4.8 -9.0 28 39 A D H <5S+ 0 0 98 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.801 124.4 43.1 -75.3 -29.5 10.3 -3.2 -7.3 29 40 A A H <5S- 0 0 0 -4,-2.8 -1,-0.2 -5,-0.2 -3,-0.2 0.799 101.8-132.4 -83.2 -29.0 9.5 -4.5 -3.9 30 41 A G T <5 + 0 0 50 -4,-1.5 2,-0.2 -5,-0.4 -3,-0.2 0.886 65.0 116.0 76.2 42.2 8.7 -8.0 -5.1 31 42 A V < - 0 0 14 -5,-1.3 2,-0.4 -6,-0.2 -1,-0.2 -0.683 65.7-114.8-130.4 178.7 5.5 -8.1 -3.1 32 43 A R E -B 50 0A 144 18,-1.4 18,-1.5 -2,-0.2 2,-0.5 -0.996 22.9-169.3-120.7 128.4 1.7 -8.3 -3.4 33 44 A I E -B 49 0A 6 -2,-0.4 2,-0.6 16,-0.2 16,-0.2 -0.948 6.8-179.0-119.5 109.2 -0.4 -5.4 -2.3 34 45 A Q E -B 48 0A 110 14,-1.8 14,-2.8 -2,-0.5 2,-0.7 -0.938 22.2-139.1-111.7 119.2 -4.1 -6.1 -2.1 35 46 A F E -B 47 0A 38 -2,-0.6 12,-0.2 12,-0.2 -2,-0.0 -0.669 22.6-150.2 -76.0 114.9 -6.5 -3.3 -1.0 36 47 A K - 0 0 62 10,-3.0 10,-0.2 -2,-0.7 -1,-0.0 -0.252 33.5 -91.7 -75.9 172.0 -9.1 -4.9 1.3 37 48 A Q S S- 0 0 142 8,-0.1 -1,-0.1 -2,-0.0 -2,-0.0 0.957 82.9 -71.3 -49.6 -61.5 -12.7 -3.5 1.5 38 49 A D S S+ 0 0 41 7,-0.1 8,-0.4 8,-0.0 -2,-0.2 -0.011 73.7 165.4-155.8 -75.8 -11.7 -1.2 4.4 39 50 A D + 0 0 62 1,-0.2 2,-2.4 6,-0.1 5,-0.1 0.576 54.4 32.1 67.0 144.2 -11.0 -3.2 7.6 40 51 A G S S+ 0 0 87 -35,-0.1 2,-0.2 6,-0.1 -1,-0.2 -0.190 123.1 14.1 78.6 -51.3 -9.3 -2.1 10.8 41 52 A T S S- 0 0 61 -2,-2.4 -2,-0.1 3,-0.4 5,-0.1 -0.651 71.2-119.0-140.7-167.6 -10.4 1.5 10.6 42 53 A G S S+ 0 0 41 -2,-0.2 -1,-0.1 -4,-0.1 -34,-0.1 0.825 101.3 37.5-108.7 -64.6 -12.9 3.7 8.7 43 54 A P S S+ 0 0 97 0, 0.0 -35,-2.7 0, 0.0 -34,-0.5 0.497 116.7 61.3 -73.1 -2.0 -11.2 6.5 6.7 44 55 A E E S-A 7 0A 31 -37,-0.3 -3,-0.4 -36,-0.1 2,-0.2 -0.925 70.5-146.4-125.6 150.0 -8.5 4.1 5.7 45 56 A K E -A 6 0A 40 -39,-3.4 -39,-3.1 -2,-0.3 2,-0.6 -0.520 28.2-107.8 -97.5 173.2 -8.4 0.8 3.8 46 57 A I E -A 5 0A 10 -8,-0.4 -10,-3.0 -41,-0.2 2,-0.6 -0.934 20.9-155.8-109.2 114.6 -6.0 -2.0 4.5 47 58 A A E -AB 4 35A 0 -43,-3.2 -43,-2.4 -2,-0.6 2,-1.0 -0.791 15.6-147.0 -80.1 118.6 -3.3 -2.7 2.0 48 59 A H E -AB 3 34A 49 -14,-2.8 -14,-1.8 -2,-0.6 2,-0.4 -0.796 13.6-166.4 -97.1 102.1 -2.4 -6.3 2.4 49 60 A I E +AB 2 33A 0 -47,-2.2 -47,-2.5 -2,-1.0 2,-0.3 -0.707 16.6 174.0 -88.6 137.0 1.3 -6.7 1.8 50 61 A M E + B 0 32A 60 -18,-1.5 -18,-1.4 -2,-0.4 -2,-0.0 -0.942 28.3 61.4-147.8 160.4 2.4 -10.3 1.3 51 62 A G S S+ 0 0 65 -2,-0.3 -20,-0.1 -20,-0.2 -21,-0.0 -0.987 93.6 23.8 127.5-122.3 5.3 -12.5 0.4 52 63 A P S > S- 0 0 56 0, 0.0 4,-2.0 0, 0.0 5,-0.1 -0.579 73.4-127.7 -79.4 145.6 8.5 -12.6 2.4 53 64 A P H > S+ 0 0 101 0, 0.0 4,-0.7 0, 0.0 0, 0.0 0.875 109.9 37.5 -64.4 -41.9 8.2 -11.4 6.1 54 65 A D H >> S+ 0 0 116 1,-0.2 4,-1.7 2,-0.2 3,-0.6 0.864 113.2 58.5 -75.0 -37.4 11.0 -8.9 6.0 55 66 A R H 3> S+ 0 0 95 1,-0.2 4,-2.9 2,-0.2 5,-0.3 0.818 96.1 63.5 -61.8 -33.0 10.0 -7.9 2.4 56 67 A C H 3X S+ 0 0 1 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.909 106.1 44.1 -56.5 -42.0 6.5 -7.0 3.8 57 68 A E H