==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER OXIDOREDUCTASE 06-JUL-06 2HL7 . COMPND 2 MOLECULE: CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMH; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; . AUTHOR A.DI MATTEO,C.TRAVAGLINI-ALLOCATELLI,S.GIANNI,M.BRUNORI . 82 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5426.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 70.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 45.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -4 A G 0 0 140 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 119.6 -4.1 -2.4 19.8 2 -3 A S - 0 0 117 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.929 360.0-114.1-144.7 156.2 -2.5 0.6 21.4 3 -2 A H - 0 0 154 -2,-0.3 2,-0.3 3,-0.0 3,-0.0 -0.708 25.7-143.8 -89.8 156.0 -3.1 4.3 21.3 4 -1 A M > - 0 0 76 -2,-0.3 3,-1.9 1,-0.1 4,-0.4 -0.803 30.2-103.7-108.3 164.2 -0.5 6.7 19.8 5 1 A A G > S+ 0 0 19 33,-0.5 3,-2.1 -2,-0.3 4,-0.2 0.840 120.1 63.2 -54.1 -37.0 0.3 10.1 21.1 6 2 A I G > S+ 0 0 10 32,-0.3 3,-1.2 1,-0.3 -1,-0.3 0.830 94.4 62.2 -59.9 -29.5 -1.7 11.7 18.3 7 3 A D G < S+ 0 0 101 -3,-1.9 -1,-0.3 1,-0.2 -2,-0.2 0.622 95.8 62.3 -68.1 -12.5 -4.8 10.0 19.7 8 4 A T G < S+ 0 0 106 -3,-2.1 2,-0.3 -4,-0.4 -1,-0.2 0.411 88.5 84.4 -99.2 -2.8 -4.4 12.0 22.9 9 5 A Y S < S- 0 0 50 -3,-1.2 2,-0.9 -4,-0.2 8,-0.0 -0.801 71.1-133.1-107.1 149.6 -4.8 15.5 21.4 10 6 A E - 0 0 170 -2,-0.3 2,-0.2 2,-0.0 -3,-0.1 -0.820 30.7-160.8 -96.5 95.2 -7.9 17.5 20.7 11 7 A F - 0 0 24 -2,-0.9 3,-0.1 1,-0.1 4,-0.0 -0.504 21.2-134.7 -81.1 153.7 -7.3 18.8 17.1 12 8 A A S S- 0 0 78 1,-0.2 2,-0.3 -2,-0.2 -1,-0.1 0.707 86.3 -6.3 -79.7 -21.6 -9.3 21.8 15.8 13 9 A S S > S- 0 0 57 1,-0.0 4,-2.0 0, 0.0 -1,-0.2 -0.958 73.7-102.8-158.6 163.9 -9.9 20.1 12.5 14 10 A D H > S+ 0 0 118 -2,-0.3 4,-2.3 1,-0.2 5,-0.2 0.847 122.4 57.0 -60.5 -34.6 -8.9 16.8 10.7 15 11 A A H > S+ 0 0 66 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.913 104.6 50.5 -62.9 -42.0 -6.5 19.0 8.6 16 12 A E H > S+ 0 0 21 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.935 109.7 51.5 -62.6 -43.4 -4.8 20.2 11.8 17 13 A R H X S+ 0 0 73 -4,-2.0 4,-2.8 1,-0.2 -1,-0.2 0.914 109.7 49.1 -55.9 -47.6 -4.4 16.5 12.9 18 14 A E H X S+ 0 0 77 -4,-2.3 4,-2.6 1,-0.2 -1,-0.2 0.891 107.7 54.1 -67.1 -34.2 -2.9 15.5 9.6 19 15 A R H X S+ 0 0 74 -4,-2.3 4,-2.6 2,-0.2 -1,-0.2 0.928 110.5 46.9 -62.3 -44.3 -0.4 18.5 9.8 20 16 A F H X S+ 0 0 1 -4,-2.2 4,-2.7 2,-0.2 5,-0.2 0.922 110.2 54.0 -58.5 -46.7 0.7 17.2 13.2 21 17 A R H X S+ 0 0 75 -4,-2.8 4,-1.0 1,-0.2 -2,-0.2 0.940 111.7 43.9 -53.1 -48.5 0.9 13.7 11.8 22 18 A N H X S+ 0 0 77 -4,-2.6 4,-2.2 1,-0.2 3,-0.5 0.920 113.5 50.1 -67.8 -44.2 3.3 14.8 9.0 23 19 A L H X S+ 0 0 7 -4,-2.6 4,-1.9 1,-0.2 -1,-0.2 0.894 109.6 50.2 -62.1 -39.4 5.4 17.0 11.3 24 20 A T H < S+ 0 0 4 -4,-2.7 14,-0.7 1,-0.2 13,-0.4 0.703 113.8 47.0 -76.4 -15.6 5.9 14.3 13.9 25 21 A Q H < S+ 0 0 93 -4,-1.0 -1,-0.2 -3,-0.5 -2,-0.2 0.814 115.1 43.5 -89.3 -29.8 7.0 11.9 11.2 26 22 A E H < S+ 0 0 50 -4,-2.2 54,-3.8 -5,-0.1 2,-0.6 0.659 100.7 73.0 -94.3 -19.8 9.4 14.3 9.3 27 23 A L E < S-A 79 0A 2 -4,-1.9 10,-0.7 52,-0.2 2,-0.3 -0.876 73.9-178.2 -88.9 124.6 11.0 15.7 12.4 28 24 A R E -AB 78 36A 61 50,-3.1 50,-2.6 -2,-0.6 8,-0.2 -0.786 36.4-140.9-122.3 163.6 13.3 12.9 13.7 29 25 A a > - 0 0 2 6,-2.5 3,-1.0 -2,-0.3 48,-0.2 -0.744 24.2-174.2-122.2 85.6 15.6 12.2 16.6 30 26 A P T 3 S+ 0 0 58 0, 0.0 5,-0.1 0, 0.0 -1,-0.1 0.631 81.1 39.4 -63.1 -22.4 18.4 10.2 14.8 31 27 A K T 3 S+ 0 0 181 45,-0.4 4,-0.1 3,-0.1 46,-0.1 0.658 91.2 107.9 -97.5 -20.0 20.5 9.4 17.9 32 28 A a S < S- 0 0 27 -3,-1.0 3,-0.3 44,-0.3 -3,-0.1 -0.125 82.7-119.4 -51.4 151.0 17.5 8.7 20.2 33 29 A Q S S+ 0 0 197 1,-0.3 2,-0.6 2,-0.1 -1,-0.1 0.899 115.9 35.5 -63.2 -36.9 16.9 5.0 21.0 34 30 A N S S- 0 0 52 1,-0.1 -1,-0.3 -5,-0.0 -2,-0.1 -0.949 75.1-174.3-114.6 110.8 13.6 5.6 19.3 35 31 A Q + 0 0 80 -2,-0.6 -6,-2.5 -3,-0.3 2,-0.9 0.623 58.4 93.5 -81.1 -13.4 14.1 8.1 16.4 36 32 A D B >> -B 28 0A 44 -8,-0.2 4,-2.8 1,-0.2 3,-1.1 -0.744 55.6-166.9 -88.1 100.5 10.4 8.4 15.5 37 33 A I T 34 S+ 0 0 4 -2,-0.9 -12,-0.2 -10,-0.7 -1,-0.2 0.661 89.6 58.2 -61.3 -20.9 8.9 11.4 17.4 38 34 A A T 34 S+ 0 0 6 -14,-0.7 -33,-0.5 -11,-0.2 -32,-0.3 0.780 117.4 30.2 -74.9 -28.6 5.4 10.2 16.5 39 35 A D T <4 S+ 0 0 91 -3,-1.1 -2,-0.2 -15,-0.2 -1,-0.1 0.773 93.2 103.7-105.2 -26.6 6.0 6.8 18.2 40 36 A S < - 0 0 7 -4,-2.8 -35,-0.1 1,-0.1 -5,-0.0 -0.205 47.2-163.2 -61.9 140.1 8.4 7.5 21.1 41 37 A N + 0 0 153 4,-0.1 -1,-0.1 5,-0.0 -4,-0.1 0.290 52.7 125.4-101.9 10.7 7.3 7.6 24.8 42 38 A A S >> S- 0 0 29 1,-0.1 4,-1.9 -8,-0.1 3,-0.6 -0.349 75.1-116.1 -60.2 141.6 10.5 9.3 25.8 43 39 A P H 3> S+ 0 0 112 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.877 115.0 58.3 -48.2 -42.9 10.0 12.6 27.6 44 40 A I H 3> S+ 0 0 50 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.903 105.6 49.8 -57.9 -39.6 11.7 14.5 24.8 45 41 A A H <> S+ 0 0 3 -3,-0.6 4,-2.8 2,-0.2 5,-0.3 0.909 109.2 49.9 -67.3 -41.1 9.1 13.2 22.3 46 42 A A H X S+ 0 0 44 -4,-1.9 4,-2.8 2,-0.2 5,-0.2 0.950 112.1 50.4 -60.7 -45.0 6.2 14.2 24.5 47 43 A D H X S+ 0 0 74 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.932 112.4 45.6 -55.7 -49.1 7.8 17.7 24.8 48 44 A L H X S+ 0 0 3 -4,-2.7 4,-2.7 2,-0.2 -1,-0.2 0.907 114.0 47.8 -63.7 -42.2 8.3 18.0 21.0 49 45 A R H X S+ 0 0 6 -4,-2.8 4,-2.8 1,-0.2 5,-0.2 0.920 110.8 52.3 -65.8 -42.4 4.8 16.8 20.2 50 46 A K H X S+ 0 0 142 -4,-2.8 4,-2.1 -5,-0.3 -1,-0.2 0.894 112.2 46.4 -57.6 -40.8 3.4 19.2 22.8 51 47 A Q H X S+ 0 0 47 -4,-2.1 4,-2.7 2,-0.2 -2,-0.2 0.906 111.1 50.4 -71.5 -43.0 5.3 22.1 21.2 52 48 A I H X S+ 0 0 1 -4,-2.7 4,-2.4 2,-0.2 -2,-0.2 0.929 112.0 48.0 -59.1 -48.4 4.2 21.2 17.6 53 49 A Y H X S+ 0 0 40 -4,-2.8 4,-2.3 2,-0.2 -2,-0.2 0.924 111.4 51.3 -54.9 -45.6 0.6 21.0 18.7 54 50 A G H X S+ 0 0 30 -4,-2.1 4,-1.6 1,-0.2 -2,-0.2 0.935 111.7 46.6 -60.8 -47.4 0.9 24.4 20.5 55 51 A Q H X>S+ 0 0 13 -4,-2.7 5,-2.5 2,-0.2 4,-0.6 0.843 108.5 54.1 -69.6 -35.8 2.4 26.0 17.4 56 52 A L H ><5S+ 0 0 5 -4,-2.4 3,-1.1 1,-0.2 -1,-0.2 0.941 111.3 47.0 -56.6 -43.6 -0.2 24.6 15.1 57 53 A Q H 3<5S+ 0 0 93 -4,-2.3 -2,-0.2 1,-0.3 -1,-0.2 0.760 104.9 59.7 -74.6 -24.1 -2.9 26.1 17.3 58 54 A Q H 3<5S- 0 0 130 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.586 121.5-107.3 -72.5 -15.4 -1.0 29.4 17.4 59 55 A G T <<5 + 0 0 63 -3,-1.1 -3,-0.2 -4,-0.6 2,-0.2 0.720 64.2 157.2 94.4 25.8 -1.4 29.6 13.6 60 56 A K < - 0 0 73 -5,-2.5 -1,-0.2 1,-0.1 2,-0.1 -0.527 40.2-118.7 -80.6 146.6 2.3 28.8 12.7 61 57 A S > - 0 0 58 -2,-0.2 4,-2.7 1,-0.1 5,-0.2 -0.424 25.0-106.8 -79.5 164.2 3.0 27.4 9.2 62 58 A D H > S+ 0 0 76 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.930 123.1 50.3 -52.7 -48.9 4.5 24.0 8.6 63 59 A G H > S+ 0 0 42 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.876 110.1 48.4 -56.9 -44.4 7.7 25.8 7.5 64 60 A E H > S+ 0 0 103 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.894 110.9 51.7 -65.6 -41.3 7.8 28.0 10.7 65 61 A I H X S+ 0 0 0 -4,-2.7 4,-2.5 2,-0.2 5,-0.3 0.931 109.1 48.5 -61.9 -48.3 7.3 25.0 12.9 66 62 A V H X S+ 0 0 14 -4,-2.3 4,-2.3 1,-0.2 5,-0.3 0.946 111.9 50.3 -58.0 -48.5 10.1 23.0 11.4 67 63 A D H X S+ 0 0 113 -4,-2.0 4,-2.5 1,-0.2 5,-0.3 0.925 111.1 49.4 -55.6 -48.1 12.5 26.0 11.7 68 64 A Y H X S+ 0 0 67 -4,-2.5 4,-2.6 1,-0.2 5,-0.3 0.965 113.2 43.5 -56.9 -57.7 11.5 26.5 15.4 69 65 A M H X S+ 0 0 2 -4,-2.5 4,-1.6 1,-0.2 8,-0.2 0.835 117.7 46.0 -61.4 -37.2 12.0 22.8 16.5 70 66 A V H X S+ 0 0 52 -4,-2.3 4,-0.7 -5,-0.3 -1,-0.2 0.929 117.6 42.2 -67.8 -49.3 15.3 22.4 14.6 71 67 A A H < S+ 0 0 91 -4,-2.5 -2,-0.2 -5,-0.3 -3,-0.2 0.789 120.9 42.4 -71.2 -28.3 16.7 25.8 15.7 72 68 A R H < S+ 0 0 156 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.760 129.2 24.2 -89.5 -26.2 15.5 25.3 19.3 73 69 A Y H >X S+ 0 0 56 -4,-1.6 4,-3.0 -5,-0.3 3,-2.2 -0.023 71.0 138.6-133.0 32.2 16.4 21.6 19.8 74 70 A G T 3< + 0 0 53 -4,-0.7 -1,-0.1 1,-0.3 -3,-0.1 0.578 61.9 74.6 -55.5 -15.1 19.2 20.9 17.3 75 71 A D T 34 S+ 0 0 155 -3,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.743 123.6 3.0 -71.4 -22.8 21.2 18.7 19.8 76 72 A F T <4 S+ 0 0 125 -3,-2.2 -45,-0.4 -6,-0.1 -44,-0.3 0.593 116.8 80.2-130.7 -28.1 18.6 15.9 19.3 77 73 A V < + 0 0 7 -4,-3.0 2,-0.3 -8,-0.2 -48,-0.2 -0.648 47.8 176.0 -92.0 140.2 16.1 17.0 16.7 78 74 A R E -A 28 0A 37 -50,-2.6 -50,-3.1 -2,-0.3 2,-0.5 -0.988 29.3-126.3-143.6 132.5 16.6 16.8 12.8 79 75 A Y E -A 27 0A 107 -2,-0.3 -52,-0.2 -52,-0.2 -53,-0.1 -0.666 26.2-178.8 -77.6 122.6 14.3 17.6 9.9 80 76 A K - 0 0 139 -54,-3.8 -1,-0.1 -2,-0.5 -2,-0.0 -0.740 13.9-155.2-123.9 80.4 14.2 14.6 7.5 81 77 A P 0 0 69 0, 0.0 -54,-0.0 0, 0.0 -2,-0.0 -0.221 360.0 360.0 -57.7 147.4 11.9 15.5 4.6 82 78 A P 0 0 143 0, 0.0 -56,-0.0 0, 0.0 0, 0.0 0.570 360.0 360.0 -75.2 360.0 10.3 12.5 2.9