==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 11-JUL-06 2HM8 . COMPND 2 MOLECULE: PDCD4 C-TERMINAL MA-3 DOMAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR L.C.WATERS,V.VEVERKA,M.BOHM,F.W.MUSKETT,P.T.CHOONG, . 136 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9337.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 100 73.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 77 56.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 314 A G 0 0 121 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 69.6 -18.9 -21.9 -30.7 2 315 A P + 0 0 109 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.261 360.0 1.9 -69.8 158.1 -21.1 -21.3 -27.6 3 316 A L - 0 0 168 1,-0.1 0, 0.0 2,-0.0 0, 0.0 0.077 57.6-165.4 55.0-174.2 -20.4 -18.4 -25.2 4 317 A G + 0 0 69 1,-0.0 2,-1.1 0, 0.0 -1,-0.1 0.275 16.0 165.9 156.2 60.9 -17.7 -15.9 -25.9 5 318 A S S S- 0 0 128 1,-0.2 3,-0.2 3,-0.1 -2,-0.0 -0.729 70.3 -25.6 -97.2 87.7 -16.7 -13.6 -23.1 6 319 A G - 0 0 66 -2,-1.1 -1,-0.2 1,-0.1 0, 0.0 0.360 59.9-116.4 85.2 140.2 -13.5 -12.0 -24.2 7 320 A G S S+ 0 0 82 -3,-0.1 2,-0.2 2,-0.1 -1,-0.1 0.105 87.6 83.9 -96.7 22.1 -10.9 -13.3 -26.7 8 321 A Q S S- 0 0 176 -3,-0.2 -3,-0.1 1,-0.0 0, 0.0 -0.658 75.2-112.6-117.4 174.3 -8.2 -13.6 -24.1 9 322 A Q - 0 0 151 -2,-0.2 2,-0.9 1,-0.0 -2,-0.1 -0.696 40.1 -87.8-107.5 160.6 -7.2 -16.1 -21.4 10 323 A P + 0 0 123 0, 0.0 3,-0.1 0, 0.0 -1,-0.0 -0.530 55.6 154.0 -69.8 101.3 -7.2 -15.9 -17.6 11 324 A V + 0 0 115 -2,-0.9 3,-0.4 1,-0.1 4,-0.1 -0.088 37.1 107.1-119.6 32.5 -3.9 -14.3 -16.6 12 325 A N > + 0 0 108 1,-0.2 4,-0.7 2,-0.1 -1,-0.1 -0.092 41.6 110.0-100.7 33.6 -5.0 -12.8 -13.3 13 326 A H H >> S+ 0 0 134 1,-0.2 4,-1.1 2,-0.2 3,-0.7 0.878 72.5 56.5 -74.2 -39.4 -3.0 -15.3 -11.3 14 327 A L H 3> S+ 0 0 73 -3,-0.4 4,-1.1 1,-0.2 3,-0.2 0.829 100.0 60.9 -61.4 -32.3 -0.4 -12.8 -10.1 15 328 A V H 3> S+ 0 0 75 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.838 101.2 53.0 -64.0 -33.5 -3.2 -10.7 -8.7 16 329 A K H X S+ 0 0 119 -4,-2.9 4,-3.2 1,-0.2 3,-0.6 0.937 110.8 47.3 -58.4 -49.4 -2.2 -14.6 4.9 25 338 A Y H 3X S+ 0 0 12 -4,-2.8 4,-0.9 1,-0.3 -1,-0.2 0.910 109.2 53.7 -59.3 -44.3 0.2 -12.2 6.7 26 339 A L H 3< S+ 0 0 63 -4,-2.5 -1,-0.3 -5,-0.2 -2,-0.2 0.746 115.0 43.4 -63.0 -23.0 -2.7 -10.6 8.5 27 340 A L H << S+ 0 0 149 -4,-1.2 -2,-0.2 -3,-0.6 -1,-0.2 0.919 126.0 27.4 -87.0 -53.0 -3.7 -14.0 9.7 28 341 A S H < S- 0 0 98 -4,-3.2 -3,-0.2 -5,-0.1 -2,-0.1 0.990 91.6-138.6 -73.1 -67.0 -0.3 -15.5 10.7 29 342 A G < + 0 0 41 -4,-0.9 2,-0.4 -5,-0.3 -3,-0.1 0.796 53.5 125.8 106.8 44.9 1.6 -12.3 11.5 30 343 A D > - 0 0 73 -5,-0.2 4,-1.4 1,-0.1 -1,-0.2 -0.938 37.9-170.8-138.7 113.8 5.1 -12.9 10.1 31 344 A I H > S+ 0 0 25 -2,-0.4 4,-2.3 1,-0.2 5,-0.2 0.792 91.3 59.2 -70.3 -28.4 6.8 -10.4 7.7 32 345 A S H > S+ 0 0 61 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.873 106.5 46.4 -67.9 -38.1 9.5 -13.0 7.0 33 346 A E H > S+ 0 0 124 2,-0.2 4,-1.0 1,-0.2 -1,-0.2 0.843 112.1 51.7 -72.7 -34.7 7.0 -15.5 5.7 34 347 A A H >X S+ 0 0 8 -4,-1.4 4,-1.4 1,-0.2 3,-1.0 0.959 106.9 50.4 -66.6 -52.8 5.3 -12.9 3.6 35 348 A E H 3X S+ 0 0 40 -4,-2.3 4,-2.5 1,-0.3 -1,-0.2 0.818 101.6 66.3 -55.4 -31.6 8.5 -11.6 1.9 36 349 A H H 3X S+ 0 0 119 -4,-1.0 4,-1.3 1,-0.2 -1,-0.3 0.901 100.9 47.3 -57.4 -43.1 9.3 -15.3 1.1 37 350 A C H > + 0 0 43 -5,-0.3 4,-1.6 -2,-0.2 3,-1.5 -0.738 19.8 165.1-115.1 82.6 8.1 -8.9 -11.0 44 357 A P H 3> S+ 0 0 74 0, 0.0 4,-0.5 0, 0.0 -1,-0.1 0.637 74.7 67.6 -69.8 -14.1 9.1 -5.5 -9.7 45 358 A H H 34 S+ 0 0 172 1,-0.1 -2,-0.0 2,-0.1 -3,-0.0 0.369 108.9 36.4 -86.9 4.5 6.7 -4.0 -12.2 46 359 A F H X> S+ 0 0 32 -3,-1.5 3,-2.6 2,-0.1 4,-0.7 0.617 96.7 75.1-123.1 -34.3 3.8 -5.5 -10.3 47 360 A H H >X S+ 0 0 16 -4,-1.6 4,-1.4 1,-0.3 3,-0.9 0.797 82.4 75.7 -52.0 -29.4 4.8 -5.2 -6.6 48 361 A H H 3X S+ 0 0 67 -4,-0.5 4,-1.2 1,-0.3 -1,-0.3 0.812 92.7 52.8 -53.2 -31.1 4.0 -1.5 -7.0 49 362 A E H <> S+ 0 0 64 -3,-2.6 4,-2.6 1,-0.2 -1,-0.3 0.815 98.5 64.5 -74.9 -31.6 0.3 -2.6 -6.8 50 363 A L H > S- 0 0 39 -2,-0.2 4,-0.9 -5,-0.2 3,-0.7 -0.592 76.7-106.5 149.4 148.8 -8.3 -1.0 13.9 64 377 A E H 3> S+ 0 0 133 1,-0.2 4,-2.5 -2,-0.2 5,-0.4 0.586 99.8 90.8 -72.4 -9.4 -4.6 -0.5 14.3 65 378 A S H 3> S+ 0 0 97 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.931 100.8 25.7 -50.7 -52.6 -4.3 -4.3 14.1 66 379 A A H <> S+ 0 0 10 -3,-0.7 4,-3.4 2,-0.2 5,-0.4 0.770 114.0 69.7 -83.1 -28.5 -3.8 -4.1 10.3 67 380 A F H X S+ 0 0 7 -4,-0.9 4,-2.3 1,-0.2 5,-0.2 0.942 106.5 37.3 -53.7 -52.8 -2.4 -0.6 10.4 68 381 A K H X S+ 0 0 138 -4,-2.5 4,-2.2 2,-0.2 -1,-0.2 0.806 116.2 56.4 -70.2 -29.9 0.8 -1.7 12.1 69 382 A M H X S+ 0 0 28 -4,-0.7 4,-1.7 -5,-0.4 -2,-0.2 0.963 113.4 36.9 -66.2 -53.8 0.8 -4.8 10.0 70 383 A I H X S+ 0 0 0 -4,-3.4 4,-3.0 2,-0.2 5,-0.4 0.955 119.5 48.3 -64.0 -52.1 0.7 -3.1 6.6 71 384 A L H X S+ 0 0 6 -4,-2.3 4,-2.2 -5,-0.4 -2,-0.2 0.933 117.5 41.5 -54.1 -50.4 2.9 -0.2 7.7 72 385 A D H X S+ 0 0 78 -4,-2.2 4,-1.7 -5,-0.2 -1,-0.2 0.778 113.6 56.8 -68.9 -26.8 5.5 -2.6 9.2 73 386 A L H X S+ 0 0 9 -4,-1.7 4,-1.8 -5,-0.2 -2,-0.2 0.968 114.0 34.7 -68.8 -55.2 5.0 -4.9 6.2 74 387 A L H X S+ 0 0 1 -4,-3.0 4,-1.9 1,-0.2 -2,-0.2 0.853 113.5 61.8 -68.2 -35.3 5.9 -2.3 3.5 75 388 A K H X S+ 0 0 69 -4,-2.2 4,-1.6 -5,-0.4 -1,-0.2 0.929 107.8 42.3 -56.3 -48.6 8.5 -0.7 5.8 76 389 A S H X S+ 0 0 45 -4,-1.7 4,-1.5 1,-0.2 -1,-0.2 0.903 112.4 53.6 -65.9 -42.3 10.5 -3.9 5.9 77 390 A L H <>S+ 0 0 5 -4,-1.8 5,-2.6 1,-0.2 6,-1.7 0.792 106.6 54.9 -63.1 -28.0 10.1 -4.5 2.2 78 391 A W H ><5S+ 0 0 49 -4,-1.9 3,-0.8 4,-0.2 -1,-0.2 0.915 114.6 36.5 -71.7 -44.6 11.4 -1.0 1.6 79 392 A K H 3<5S+ 0 0 182 -4,-1.6 -2,-0.2 1,-0.2 -1,-0.2 0.592 108.5 67.7 -83.1 -11.6 14.6 -1.6 3.5 80 393 A S T 3<5S- 0 0 52 -4,-1.5 -1,-0.2 -5,-0.2 -2,-0.2 0.263 115.6-112.2 -90.5 11.3 14.8 -5.2 2.3 81 394 A S T < 5S+ 0 0 117 -3,-0.8 3,-0.2 2,-0.2 -3,-0.2 0.771 93.9 110.0 63.4 25.7 15.5 -3.9 -1.2 82 395 A T S - 0 0 62 -2,-0.4 4,-1.8 -3,-0.2 3,-0.3 0.050 31.3-104.6 -51.7 167.8 12.4 0.7 -4.4 85 398 A I H > S+ 0 0 76 1,-0.2 4,-1.7 2,-0.2 5,-0.2 0.813 123.0 54.7 -67.1 -30.6 11.9 4.4 -3.6 86 399 A D H > S+ 0 0 109 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.772 105.6 54.0 -73.4 -26.7 10.1 4.8 -7.0 87 400 A Q H > S+ 0 0 24 -3,-0.3 4,-2.5 2,-0.2 -2,-0.2 0.950 108.9 45.3 -72.3 -51.3 7.7 2.0 -6.1 88 401 A M H X S+ 0 0 1 -4,-1.8 4,-2.7 2,-0.2 5,-0.2 0.947 115.0 47.6 -57.3 -52.1 6.5 3.5 -2.8 89 402 A K H X S+ 0 0 41 -4,-1.7 4,-2.4 1,-0.2 -1,-0.2 0.901 114.3 47.4 -56.6 -43.3 6.1 7.0 -4.2 90 403 A R H X S+ 0 0 166 -4,-1.6 4,-0.8 1,-0.2 -1,-0.2 0.845 113.8 48.0 -67.7 -34.4 4.2 5.5 -7.2 91 404 A G H X S+ 0 0 1 -4,-2.5 4,-0.5 2,-0.2 -2,-0.2 0.835 113.0 47.2 -75.3 -33.3 2.1 3.4 -4.8 92 405 A Y H >X S+ 0 0 0 -4,-2.7 3,-1.6 1,-0.2 4,-1.0 0.905 102.6 61.7 -74.1 -43.3 1.3 6.3 -2.5 93 406 A E H 3< S+ 0 0 68 -4,-2.4 3,-0.4 1,-0.3 4,-0.4 0.822 96.0 63.6 -52.1 -32.8 0.3 8.7 -5.3 94 407 A R H >< S+ 0 0 117 -4,-0.8 3,-1.3 1,-0.2 -1,-0.3 0.854 94.8 59.3 -61.2 -35.6 -2.4 6.3 -6.2 95 408 A I H X< S+ 0 0 2 -3,-1.6 3,-1.2 -4,-0.5 -1,-0.2 0.869 100.7 54.3 -61.4 -37.8 -4.0 6.9 -2.8 96 409 A Y T 3< S+ 0 0 55 -4,-1.0 -1,-0.3 -3,-0.4 -2,-0.2 0.575 119.2 35.5 -72.9 -8.6 -4.3 10.6 -3.6 97 410 A N T < S+ 0 0 116 -3,-1.3 -1,-0.3 -4,-0.4 -2,-0.2 0.084 114.2 56.7-130.2 20.3 -6.2 9.5 -6.8 98 411 A E S < S+ 0 0 74 -3,-1.2 4,-0.2 -5,-0.1 3,-0.2 0.052 77.9 92.5-139.1 23.8 -8.1 6.5 -5.4 99 412 A I + 0 0 30 1,-0.1 5,-0.3 -4,-0.1 4,-0.3 -0.503 38.4 137.0-119.9 62.0 -10.0 8.0 -2.5 100 413 A P S > S- 0 0 98 0, 0.0 4,-0.6 0, 0.0 5,-0.2 0.973 91.5 -1.5 -69.7 -57.9 -13.4 9.0 -4.1 101 414 A D T 4 S+ 0 0 87 3,-0.2 4,-0.1 -3,-0.2 -2,-0.1 0.649 115.1 85.0-106.9 -24.7 -15.7 7.8 -1.4 102 415 A I T 4 S+ 0 0 50 1,-0.2 7,-0.5 -4,-0.2 6,-0.4 0.787 108.3 27.7 -48.1 -29.3 -13.1 6.4 1.0 103 416 A N T 4 S+ 0 0 61 -4,-0.3 -1,-0.2 6,-0.1 7,-0.2 0.882 128.2 37.7 -97.2 -63.2 -12.9 9.9 2.3 104 417 A L S < S+ 0 0 129 -4,-0.6 2,-0.2 -5,-0.3 -3,-0.2 0.982 114.3 52.2 -52.7 -75.0 -16.2 11.6 1.6 105 418 A D S S+ 0 0 92 1,-0.2 3,-0.2 -5,-0.2 -1,-0.0 -0.466 120.5 11.8 -68.7 131.6 -18.5 8.7 2.4 106 419 A V S > S- 0 0 102 -2,-0.2 3,-0.9 1,-0.2 2,-0.8 0.998 84.0-138.6 63.9 76.3 -17.9 7.1 5.8 107 420 A P T 3 S+ 0 0 106 0, 0.0 -1,-0.2 0, 0.0 -4,-0.1 -0.536 77.6 74.5 -69.7 106.1 -15.5 9.6 7.5 108 421 A H T 3> S+ 0 0 142 -2,-0.8 4,-0.6 -6,-0.4 -5,-0.1 0.162 72.6 73.4-179.0 -35.0 -12.8 7.5 9.3 109 422 A S H X> S+ 0 0 9 -3,-0.9 4,-2.2 -7,-0.5 3,-1.3 0.893 92.6 60.2 -64.8 -40.7 -10.4 6.2 6.6 110 423 A Y H 3> S+ 0 0 79 -8,-0.4 4,-2.3 1,-0.3 5,-0.2 0.916 98.3 57.0 -53.1 -47.6 -8.9 9.6 6.1 111 424 A S H 3> S+ 0 0 73 1,-0.2 4,-1.0 2,-0.2 -1,-0.3 0.769 109.6 48.7 -56.3 -25.4 -7.8 9.8 9.8 112 425 A V H X S+ 0 0 1 -4,-3.0 4,-1.8 -5,-0.2 3,-0.6 0.968 115.6 47.1 -72.8 -56.0 1.7 8.5 6.0 118 431 A E H 3X S+ 0 0 81 -4,-2.8 4,-0.9 1,-0.3 -2,-0.2 0.827 109.3 58.3 -55.2 -32.7 3.1 10.6 8.8 119 432 A E H >X S+ 0 0 94 -4,-1.8 4,-1.0 -5,-0.3 3,-0.5 0.895 105.7 47.4 -65.1 -41.1 4.2 7.3 10.4 120 433 A C H S+ 0 0 0 -4,-1.2 4,-1.4 -3,-0.6 5,-1.3 0.827 100.4 67.5 -69.5 -32.4 6.3 6.4 7.4 121 434 A F H 3<5S+ 0 0 58 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.837 104.6 43.9 -56.6 -34.0 7.8 9.9 7.3 122 435 A Q H <<5S+ 0 0 165 -4,-0.9 -1,-0.3 -3,-0.5 -2,-0.2 0.766 104.2 64.1 -82.1 -27.6 9.6 9.0 10.6 123 436 A A H <5S- 0 0 29 -4,-1.0 -2,-0.2 -3,-0.1 -1,-0.2 0.799 108.7-122.5 -65.8 -28.8 10.6 5.6 9.4 124 437 A G T <5S+ 0 0 55 -4,-1.4 -3,-0.2 2,-0.2 -2,-0.1 0.726 84.0 108.1 91.8 24.7 12.8 7.2 6.7 125 438 A I S - 0 0 73 -2,-0.4 4,-2.1 1,-0.1 3,-0.5 -0.353 35.9 -97.4 -85.3 168.5 10.7 12.0 1.7 128 441 A K H > S+ 0 0 158 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.776 121.0 67.3 -55.3 -26.5 9.1 15.3 2.5 129 442 A Q H > S+ 0 0 132 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.967 106.5 35.6 -59.2 -56.6 7.9 15.4 -1.1 130 443 A L H >> S+ 0 0 0 -3,-0.5 4,-1.2 2,-0.2 3,-0.8 0.950 118.3 51.1 -63.2 -51.2 5.5 12.4 -0.6 131 444 A R H 3< S+ 0 0 104 -4,-2.1 3,-0.4 1,-0.3 -1,-0.2 0.869 110.1 51.1 -54.6 -38.8 4.5 13.4 2.9 132 445 A D H 3< S+ 0 0 127 -4,-2.5 -1,-0.3 -5,-0.3 -2,-0.2 0.778 103.0 60.1 -70.2 -26.8 3.8 16.9 1.7 133 446 A L H << S+ 0 0 83 -4,-1.2 -1,-0.2 -3,-0.8 -2,-0.2 0.776 90.2 86.1 -71.5 -26.5 1.6 15.4 -1.1 134 447 A C S < S- 0 0 13 -4,-1.2 2,-0.2 -3,-0.4 -41,-0.0 -0.588 88.8-113.6 -80.0 134.5 -0.6 13.8 1.5 135 448 A P 0 0 53 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.478 360.0 360.0 -69.8 130.3 -3.4 16.0 2.9 136 449 A S 0 0 119 -2,-0.2 -4,-0.0 -4,-0.1 -2,-0.0 -0.901 360.0 360.0-111.4 360.0 -3.1 16.9 6.6