==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 28-MAY-09 3HM5 . COMPND 2 MOLECULE: DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR L.DOMBROVSKI,W.TEMPEL,M.F.AMAYA,Y.TONG,S.NI,C.BOUNTRA, . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4720.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 68.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 51.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 134 A Q 0 0 235 0, 0.0 31,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 153.3 9.8 22.2 -5.0 2 135 A V - 0 0 22 26,-0.1 30,-0.0 1,-0.1 26,-0.0 -0.653 360.0-121.1 -85.8 126.4 9.5 22.3 -1.3 3 136 A P - 0 0 33 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.220 18.6-141.8 -57.2 156.5 12.3 24.1 0.6 4 137 A V - 0 0 96 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.979 13.9-158.4-124.0 116.9 14.3 22.2 3.2 5 138 A Y - 0 0 22 -2,-0.5 2,-0.1 1,-0.0 60,-0.0 -0.694 14.3-126.7 -92.8 145.2 15.2 24.1 6.3 6 139 A S > - 0 0 54 -2,-0.3 4,-2.4 1,-0.1 5,-0.2 -0.416 27.6-108.5 -76.3 165.2 18.1 23.0 8.6 7 140 A E H > S+ 0 0 73 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.910 122.9 49.4 -61.4 -41.4 17.7 22.5 12.3 8 141 A Q H > S+ 0 0 140 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.896 108.1 53.6 -65.0 -41.1 19.6 25.7 12.9 9 142 A E H >>S+ 0 0 32 1,-0.2 4,-2.1 2,-0.2 5,-0.7 0.924 109.6 47.9 -58.9 -47.3 17.5 27.6 10.4 10 143 A Y H X>S+ 0 0 2 -4,-2.4 4,-1.6 3,-0.2 5,-0.5 0.936 112.6 48.9 -55.2 -48.0 14.4 26.5 12.2 11 144 A Q H <5S+ 0 0 58 -4,-2.3 4,-0.2 1,-0.2 -2,-0.2 0.942 118.9 37.1 -64.0 -45.0 15.8 27.4 15.6 12 145 A L H <5S+ 0 0 103 -4,-2.6 -1,-0.2 -5,-0.2 -2,-0.2 0.855 136.2 7.2 -72.1 -35.7 17.0 30.9 14.6 13 146 A Y H <5S+ 0 0 105 -4,-2.1 -3,-0.2 -5,-0.3 -2,-0.2 0.643 114.9 59.1-129.3 -23.0 14.2 32.0 12.2 14 147 A L T << + 0 0 0 -4,-1.6 -3,-0.1 -5,-0.7 -4,-0.1 0.339 64.2 126.1-111.6 4.3 11.2 29.8 11.9 15 148 A H < - 0 0 121 -5,-0.5 2,-0.3 -4,-0.2 5,-0.1 -0.322 31.8-177.0 -62.5 144.3 9.7 29.6 15.4 16 149 A D B > -A 19 0A 67 3,-0.6 3,-1.6 1,-0.0 -2,-0.0 -0.978 31.6-131.1-140.7 135.1 6.1 30.4 15.9 17 150 A D T 3 S+ 0 0 178 -2,-0.3 -1,-0.0 1,-0.3 -2,-0.0 0.713 108.9 45.3 -57.1 -21.6 4.3 30.5 19.3 18 151 A A T 3 S+ 0 0 64 2,-0.0 2,-0.4 1,-0.0 -1,-0.3 0.368 106.4 65.1-106.0 6.2 1.4 28.4 17.9 19 152 A W B < -A 16 0A 25 -3,-1.6 -3,-0.6 42,-0.0 2,-0.2 -0.988 64.6-146.0-132.0 136.4 3.4 25.7 15.9 20 153 A T > - 0 0 76 -2,-0.4 4,-2.2 1,-0.1 5,-0.1 -0.594 27.9-119.8 -87.2 160.3 5.8 23.0 17.0 21 154 A K H > S+ 0 0 78 -2,-0.2 4,-3.1 1,-0.2 5,-0.2 0.894 116.1 59.0 -63.1 -39.1 8.8 22.0 14.9 22 155 A A H > S+ 0 0 58 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.927 108.0 42.9 -55.5 -45.8 7.2 18.5 14.8 23 156 A E H > S+ 0 0 8 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.896 113.9 51.3 -68.6 -41.8 4.0 19.9 13.2 24 157 A T H X S+ 0 0 0 -4,-2.2 4,-2.4 2,-0.2 5,-0.2 0.933 109.5 50.2 -59.2 -46.4 5.9 22.1 10.8 25 158 A D H X S+ 0 0 58 -4,-3.1 4,-2.6 1,-0.2 -2,-0.2 0.908 110.3 51.6 -55.9 -43.1 8.1 19.1 9.7 26 159 A H H X S+ 0 0 38 -4,-2.1 4,-2.7 -5,-0.2 5,-0.2 0.922 108.9 49.9 -59.8 -50.2 4.8 17.2 9.2 27 160 A L H X S+ 0 0 0 -4,-2.8 4,-2.3 2,-0.2 -2,-0.2 0.918 112.7 46.6 -53.8 -46.6 3.4 20.0 7.0 28 161 A F H X S+ 0 0 0 -4,-2.4 4,-1.9 2,-0.2 -2,-0.2 0.889 111.1 52.7 -68.9 -36.5 6.6 20.1 4.9 29 162 A D H X S+ 0 0 65 -4,-2.6 4,-2.7 2,-0.2 5,-0.2 0.949 111.5 45.1 -61.2 -48.2 6.6 16.3 4.6 30 163 A L H X S+ 0 0 2 -4,-2.7 4,-2.6 1,-0.2 6,-0.3 0.887 108.4 58.1 -64.0 -39.1 3.0 16.3 3.3 31 164 A S H <>S+ 0 0 1 -4,-2.3 5,-1.8 -5,-0.2 -1,-0.2 0.859 111.1 43.0 -55.0 -41.2 3.9 19.2 1.0 32 165 A R H ><5S+ 0 0 96 -4,-1.9 3,-1.1 -3,-0.2 -2,-0.2 0.953 116.5 45.4 -66.1 -55.1 6.6 17.0 -0.6 33 166 A R H 3<5S+ 0 0 127 -4,-2.7 -2,-0.2 1,-0.2 -3,-0.2 0.789 119.6 39.6 -64.5 -31.8 4.6 13.8 -0.8 34 167 A F T ><5S- 0 0 34 -4,-2.6 3,-1.9 -5,-0.2 -1,-0.2 0.063 107.2-115.7-114.6 23.1 1.4 15.5 -2.2 35 168 A D T < 5 - 0 0 124 -3,-1.1 -3,-0.2 1,-0.3 -4,-0.1 0.787 68.6 -61.2 56.8 38.2 2.9 17.9 -4.6 36 169 A L T 3 - 0 0 152 -3,-1.9 4,-2.8 1,-0.2 3,-0.7 -0.783 27.8-166.9 -90.0 97.3 -2.0 20.1 -3.2 38 171 A F H 3> S+ 0 0 17 -2,-1.1 4,-2.6 1,-0.3 -1,-0.2 0.792 82.3 58.6 -68.0 -23.2 -3.3 21.8 -0.1 39 172 A V H 3> S+ 0 0 115 2,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.887 113.2 40.5 -64.2 -38.7 -6.7 20.2 -0.2 40 173 A V H <> S+ 0 0 33 -3,-0.7 4,-2.3 2,-0.2 -2,-0.2 0.907 113.8 52.4 -73.7 -46.4 -4.9 16.8 -0.0 41 174 A I H X S+ 0 0 0 -4,-2.8 4,-0.6 1,-0.2 -2,-0.2 0.944 111.9 48.0 -53.0 -48.3 -2.4 18.1 2.6 42 175 A H H >< S+ 0 0 58 -4,-2.6 3,-0.7 1,-0.2 -1,-0.2 0.908 112.0 49.1 -59.1 -44.6 -5.3 19.3 4.6 43 176 A D H 3< S+ 0 0 123 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.836 115.6 42.8 -61.1 -37.5 -7.2 15.9 4.2 44 177 A R H 3< S+ 0 0 134 -4,-2.3 -1,-0.2 -3,-0.1 -2,-0.2 0.438 85.0 128.6 -95.4 3.1 -4.1 13.9 5.2 45 178 A Y S << S- 0 0 9 -3,-0.7 2,-2.3 -4,-0.6 3,-0.2 -0.253 70.5-116.9 -66.3 140.6 -3.1 16.1 8.1 46 179 A D > + 0 0 50 1,-0.2 4,-2.3 -23,-0.1 -1,-0.1 -0.517 44.3 167.9 -79.0 77.3 -2.5 14.3 11.5 47 180 A H T 4 + 0 0 69 -2,-2.3 -1,-0.2 1,-0.2 -2,-0.1 0.619 68.3 69.1 -72.0 -11.2 -5.3 16.2 13.1 48 181 A Q T 4 S+ 0 0 92 -3,-0.2 -1,-0.2 1,-0.1 -2,-0.1 0.995 111.4 25.0 -61.3 -69.8 -4.8 13.7 16.0 49 182 A Q T 4 S+ 0 0 142 2,-0.1 2,-0.3 -26,-0.0 -2,-0.2 0.856 128.7 49.4 -62.2 -37.2 -1.4 14.9 17.2 50 183 A F S < S- 0 0 25 -4,-2.3 3,-0.1 1,-0.2 0, 0.0 -0.731 92.3 -91.7-115.6 156.8 -1.9 18.4 15.9 51 184 A K - 0 0 55 -2,-0.3 2,-0.6 1,-0.2 -1,-0.2 -0.002 50.0 -90.7 -52.4 157.3 -4.6 21.0 16.0 52 185 A K - 0 0 91 -4,-0.1 2,-0.4 -5,-0.0 -1,-0.2 -0.679 53.2-169.9 -70.8 121.1 -7.4 21.4 13.5 53 186 A R - 0 0 35 -2,-0.6 2,-0.1 -11,-0.1 -8,-0.1 -0.941 18.2-126.5-116.5 140.0 -5.8 23.7 11.0 54 187 A S > - 0 0 50 -2,-0.4 4,-1.9 1,-0.1 5,-0.2 -0.385 29.0-110.8 -71.6 161.6 -7.7 25.4 8.1 55 188 A V H > S+ 0 0 41 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.898 124.5 53.8 -56.6 -38.7 -6.3 25.1 4.6 56 189 A E H > S+ 0 0 111 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.885 103.9 53.6 -67.0 -39.3 -5.5 28.8 4.9 57 190 A D H > S+ 0 0 74 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.901 110.8 48.5 -57.9 -42.8 -3.5 28.2 8.2 58 191 A L H X S+ 0 0 0 -4,-1.9 4,-2.3 1,-0.2 -2,-0.2 0.924 112.3 46.5 -67.8 -44.7 -1.4 25.6 6.4 59 192 A K H X S+ 0 0 52 -4,-2.5 4,-2.6 2,-0.2 5,-0.3 0.903 111.5 51.1 -65.5 -39.7 -0.7 27.8 3.4 60 193 A E H X S+ 0 0 129 -4,-2.3 4,-2.1 2,-0.2 5,-0.2 0.903 111.3 47.8 -66.4 -37.7 0.2 30.8 5.6 61 194 A R H X S+ 0 0 7 -4,-2.0 4,-2.0 2,-0.2 -2,-0.2 0.950 113.4 48.7 -66.4 -49.0 2.6 28.8 7.7 62 195 A Y H X S+ 0 0 2 -4,-2.3 4,-2.1 1,-0.2 -2,-0.2 0.939 115.9 40.6 -58.5 -50.2 4.3 27.2 4.5 63 196 A Y H X S+ 0 0 111 -4,-2.6 4,-2.4 2,-0.2 -1,-0.2 0.802 108.5 59.5 -81.7 -23.3 4.8 30.5 2.7 64 197 A H H X S+ 0 0 95 -4,-2.1 4,-2.8 -5,-0.3 -1,-0.2 0.943 110.5 45.8 -53.5 -50.1 5.8 32.5 5.8 65 198 A I H X S+ 0 0 0 -4,-2.0 4,-2.9 2,-0.2 5,-0.2 0.930 110.0 52.8 -62.6 -42.5 8.7 30.0 6.0 66 199 A C H X S+ 0 0 28 -4,-2.1 4,-2.4 2,-0.2 -1,-0.2 0.929 112.5 45.3 -56.4 -46.1 9.4 30.2 2.3 67 200 A A H X S+ 0 0 54 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.933 113.2 49.8 -65.5 -46.9 9.7 34.0 2.5 68 201 A K H X S+ 0 0 39 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.928 112.2 47.4 -60.0 -44.9 11.8 33.8 5.7 69 202 A L H X S+ 0 0 2 -4,-2.9 4,-2.1 1,-0.2 -1,-0.2 0.896 108.8 54.3 -63.5 -44.6 14.2 31.3 4.1 70 203 A A H < S+ 0 0 66 -4,-2.4 4,-0.3 -5,-0.2 -1,-0.2 0.911 113.2 44.8 -52.0 -47.1 14.5 33.4 0.9 71 204 A N H >< S+ 0 0 118 -4,-2.2 3,-1.4 1,-0.2 -2,-0.2 0.949 114.4 44.3 -64.3 -51.6 15.5 36.3 3.1 72 205 A V H 3< S+ 0 0 48 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.795 110.3 56.0 -70.6 -24.2 18.0 34.7 5.4 73 206 A R T 3< 0 0 126 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.514 360.0 360.0 -87.5 -1.7 19.7 32.8 2.6 74 207 A A < 0 0 123 -3,-1.4 -1,-0.2 -4,-0.3 -2,-0.2 0.908 360.0 360.0 -76.2 360.0 20.4 36.0 0.7