==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 06-APR-95 1HNR . COMPND 2 MOLECULE: H-NS; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR H.SHINDO,T.IWAKI,R.IEDA,H.KURUMIZAKA,C.UEGUCHI,T.MIZUNO, . 47 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3936.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 46.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 10.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 14.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 90 A A 0 0 127 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 172.9 -0.5 -7.1 -7.5 2 91 A Q + 0 0 165 1,-0.2 0, 0.0 2,-0.1 0, 0.0 0.959 360.0 154.0 55.9 57.6 -2.7 -6.1 -4.5 3 92 A R - 0 0 157 1,-0.1 -1,-0.2 17,-0.0 17,-0.0 -0.904 28.4-173.6-120.0 100.3 -0.1 -3.8 -3.0 4 93 A P S S+ 0 0 114 0, 0.0 2,-2.4 0, 0.0 3,-0.3 0.816 74.9 82.0 -60.6 -31.5 -1.7 -1.0 -0.8 5 94 A A + 0 0 28 1,-0.2 14,-0.1 13,-0.1 18,-0.0 -0.441 48.7 143.1 -75.9 70.2 1.8 0.5 -0.5 6 95 A K + 0 0 77 -2,-2.4 39,-0.9 12,-0.1 2,-0.2 0.565 40.1 103.4 -84.5 -11.1 1.6 2.3 -3.8 7 96 A Y B -A 44 0A 73 -3,-0.3 12,-2.6 37,-0.2 2,-0.3 -0.557 60.7-153.5 -76.4 136.1 3.4 5.3 -2.3 8 97 A S E -B 18 0B 10 35,-2.2 2,-0.3 10,-0.3 10,-0.2 -0.770 2.5-150.7-110.3 155.3 7.1 5.5 -3.3 9 98 A Y E -B 17 0B 57 8,-2.4 8,-1.0 6,-0.3 2,-0.4 -0.897 2.1-157.6-123.7 154.2 10.1 7.1 -1.5 10 99 A V + 0 0 52 -2,-0.3 22,-0.2 6,-0.2 2,-0.1 -0.992 13.6 178.3-136.0 125.4 13.3 8.8 -2.7 11 100 A D - 0 0 30 -2,-0.4 5,-0.1 20,-0.1 18,-0.0 -0.321 50.6 -79.1-109.6-167.0 16.5 9.2 -0.7 12 101 A E S S+ 0 0 126 1,-0.2 -1,-0.0 -2,-0.1 -2,-0.0 0.897 131.2 45.3 -63.3 -42.9 20.0 10.6 -1.4 13 102 A N S S- 0 0 152 2,-0.0 -1,-0.2 1,-0.0 -3,-0.0 0.944 117.6-111.4 -66.9 -49.1 21.0 7.4 -3.3 14 103 A G + 0 0 37 1,-0.1 2,-2.3 3,-0.0 -2,-0.1 0.674 47.0 171.8 118.0 40.8 17.8 7.2 -5.3 15 104 A E - 0 0 80 1,-0.1 2,-2.1 2,-0.0 -6,-0.3 -0.482 11.1-173.9 -78.4 71.1 16.0 4.1 -3.8 16 105 A T + 0 0 95 -2,-2.3 2,-0.3 -8,-0.1 -6,-0.2 -0.479 34.4 130.7 -70.0 81.4 12.8 4.7 -5.8 17 106 A K E -B 9 0B 104 -2,-2.1 -8,-2.4 -8,-1.0 -2,-0.0 -0.855 63.6 -80.3-132.2 165.8 10.8 1.9 -4.1 18 107 A T E -B 8 0B 69 -2,-0.3 -10,-0.3 -10,-0.2 -12,-0.1 -0.228 37.1-122.6 -64.1 155.9 7.5 1.5 -2.4 19 108 A W + 0 0 56 -12,-2.6 3,-0.1 -14,-0.1 -11,-0.1 0.994 65.2 130.0 -62.3 -64.2 7.1 2.7 1.3 20 109 A T > + 0 0 89 -13,-0.2 3,-2.5 1,-0.2 2,-2.0 0.043 29.3 90.9 41.5-149.5 6.0 -0.7 2.7 21 110 A G T 3 S- 0 0 56 1,-0.3 -1,-0.2 2,-0.1 -2,-0.1 -0.475 122.9 -14.8 70.2 -82.8 7.9 -2.0 5.8 22 111 A Q T 3 S- 0 0 132 -2,-2.0 -1,-0.3 -3,-0.1 -2,-0.1 0.398 92.9-117.4-127.2 -9.3 5.5 -0.4 8.3 23 112 A G S < S+ 0 0 54 -3,-2.5 2,-0.3 1,-0.2 -2,-0.1 0.999 71.7 111.3 65.6 69.4 3.7 2.1 6.0 24 113 A R S S- 0 0 147 -4,-0.4 -1,-0.2 -5,-0.0 -2,-0.1 -0.883 72.7-101.7-155.2-177.6 4.7 5.4 7.6 25 114 A T + 0 0 61 -2,-0.3 -6,-0.0 1,-0.2 0, 0.0 -0.832 39.2 167.8-120.6 88.7 6.8 8.6 7.1 26 115 A P - 0 0 76 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.999 63.2 -73.2 -65.4 -73.7 10.1 8.2 9.0 27 116 A A S > S+ 0 0 58 3,-0.0 4,-3.0 0, 0.0 5,-0.2 0.360 115.0 78.3-159.1 -38.9 12.3 11.1 7.7 28 117 A V H > S+ 0 0 53 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.926 102.2 43.4 -49.6 -54.0 13.5 10.4 4.2 29 118 A I H > S+ 0 0 11 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.929 114.0 50.5 -59.1 -49.0 10.2 11.3 2.6 30 119 A K H > S+ 0 0 106 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.899 112.1 48.2 -57.4 -43.8 9.8 14.4 4.8 31 120 A K H X S+ 0 0 87 -4,-3.0 4,-2.9 2,-0.2 5,-0.3 0.963 113.3 45.7 -61.8 -54.3 13.3 15.6 3.9 32 121 A A H X>S+ 0 0 23 -4,-2.6 4,-2.4 1,-0.2 5,-1.0 0.856 113.9 51.4 -57.6 -37.0 12.8 15.1 0.1 33 122 A M H <5S+ 0 0 103 -4,-2.6 -1,-0.2 3,-0.2 -2,-0.2 0.935 112.4 44.1 -66.5 -47.8 9.4 16.8 0.5 34 123 A D H <5S+ 0 0 141 -4,-2.6 -2,-0.2 1,-0.2 -1,-0.2 0.928 116.7 46.3 -63.1 -47.0 10.8 19.9 2.3 35 124 A E H <5S- 0 0 122 -4,-2.9 -2,-0.2 -5,-0.2 -1,-0.2 0.897 145.6 -19.5 -63.2 -42.9 13.8 20.1 -0.1 36 125 A Q T <5S+ 0 0 119 -4,-2.4 -3,-0.2 -5,-0.3 -4,-0.1 0.531 70.7 155.5-128.0 -79.1 11.6 19.7 -3.2 37 126 A G < + 0 0 24 -5,-1.0 3,-0.1 -8,-0.1 -4,-0.1 0.906 12.9 172.4 39.3 71.9 8.1 18.2 -2.8 38 127 A K - 0 0 144 1,-0.2 2,-0.2 2,-0.0 -1,-0.1 0.952 64.0 -30.3 -69.6 -50.4 6.5 19.7 -5.9 39 128 A S S > S- 0 0 62 1,-0.0 3,-1.3 0, 0.0 4,-0.2 -0.862 72.6 -82.6-152.4-176.8 3.3 17.7 -5.5 40 129 A L G >> S+ 0 0 114 1,-0.3 4,-3.1 -2,-0.2 3,-2.1 0.805 120.4 73.1 -65.3 -28.2 2.0 14.3 -4.2 41 130 A D G 34 S+ 0 0 72 1,-0.3 -1,-0.3 2,-0.2 5,-0.1 0.760 79.0 74.3 -56.1 -28.2 3.1 13.0 -7.6 42 131 A D G <4 S+ 0 0 42 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.771 118.4 14.7 -57.4 -27.0 6.8 13.3 -6.3 43 132 A F T <4 S+ 0 0 16 -3,-2.1 -35,-2.2 -4,-0.2 2,-0.4 0.717 117.0 71.8-116.4 -43.6 6.1 10.2 -4.2 44 133 A L B < S-A 7 0A 37 -4,-3.1 2,-1.7 -37,-0.2 -37,-0.2 -0.663 76.2-136.9 -81.4 129.1 2.9 8.6 -5.5 45 134 A I - 0 0 90 -39,-0.9 2,-2.5 -2,-0.4 -1,-0.1 -0.228 45.5-106.7 -79.9 48.7 3.4 6.9 -8.9 46 135 A K 0 0 146 -2,-1.7 -1,-0.2 1,-0.3 -2,-0.1 -0.376 360.0 360.0 64.0 -73.8 0.1 8.5 -10.1 47 136 A Q 0 0 142 -2,-2.5 -1,-0.3 -41,-0.0 -41,-0.0 0.431 360.0 360.0 -68.6 360.0 -1.8 5.1 -10.0