==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 06-APR-95 1HNS . COMPND 2 MOLECULE: H-NS; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR H.SHINDO,T.IWAKI,R.IEDA,H.KURUMIZAKA,C.UEGUCHI,T.MIZUNO, . 47 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4231.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 48.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 90 A A 0 0 112 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-177.9 -2.0 -8.1 -5.0 2 91 A Q + 0 0 203 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.845 360.0 99.5 37.4 52.0 -1.2 -6.6 -8.4 3 92 A R S S- 0 0 205 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 -0.978 84.4 -84.0-158.1 151.8 -1.9 -3.1 -7.0 4 93 A P - 0 0 92 0, 0.0 40,-0.0 0, 0.0 0, 0.0 -0.308 30.9-141.9 -59.9 139.8 0.1 -0.2 -5.7 5 94 A A - 0 0 69 2,-0.1 3,-0.1 15,-0.0 13,-0.0 0.974 62.5 -71.2 -66.8 -56.6 1.1 -0.5 -2.0 6 95 A K S S- 0 0 143 1,-0.2 2,-0.3 14,-0.0 38,-0.1 0.122 91.3 -34.2-166.0 -56.5 0.6 3.2 -1.2 7 96 A Y - 0 0 82 36,-0.1 12,-1.7 2,-0.0 13,-0.4 -0.948 50.1-132.1-168.0 177.3 3.4 5.3 -2.7 8 97 A S + 0 0 9 -2,-0.3 2,-0.3 10,-0.2 37,-0.1 -0.922 17.0 178.1-140.1 163.6 7.1 5.3 -3.6 9 98 A Y - 0 0 7 -2,-0.3 8,-2.4 35,-0.1 9,-0.8 -0.978 20.4-130.0-161.8 162.2 10.2 7.6 -3.3 10 99 A V B +A 16 0A 76 -2,-0.3 4,-0.2 6,-0.2 6,-0.1 -0.857 46.5 118.3-116.9 152.3 13.9 7.8 -4.0 11 100 A D S S+ 0 0 104 2,-1.4 -1,-0.1 4,-0.5 5,-0.1 -0.119 73.1 40.7-168.6 -85.3 16.8 8.6 -1.6 12 101 A E S S+ 0 0 129 2,-0.1 2,-0.3 3,-0.0 4,-0.1 0.903 131.2 9.9 -49.9 -47.8 19.6 6.2 -0.8 13 102 A N S S- 0 0 76 2,-0.4 -2,-1.4 1,-0.0 4,-0.2 -0.814 83.5-105.8-128.5 168.5 19.6 5.1 -4.4 14 103 A G S S+ 0 0 79 -2,-0.3 2,-0.2 -4,-0.2 -2,-0.1 0.607 98.1 91.1 -69.5 -11.1 18.1 6.4 -7.7 15 104 A E S S- 0 0 156 1,-0.1 2,-0.5 2,-0.0 -4,-0.5 -0.509 95.1 -95.3 -85.1 154.7 15.7 3.4 -7.4 16 105 A T B -A 10 0A 70 -2,-0.2 -6,-0.2 1,-0.2 -1,-0.1 -0.588 28.5-165.7 -73.7 117.7 12.4 3.6 -5.6 17 106 A K - 0 0 86 -8,-2.4 5,-0.3 -2,-0.5 -1,-0.2 0.747 35.9-138.4 -73.2 -24.5 12.8 2.4 -2.0 18 107 A T - 0 0 48 -9,-0.8 4,-0.3 25,-0.1 -10,-0.2 0.349 11.4-107.1 76.1 148.8 9.0 2.1 -1.7 19 108 A W S >>S+ 0 0 45 -12,-1.7 5,-2.8 4,-0.2 4,-1.3 0.945 101.6 54.1 -74.4 -50.2 7.0 3.2 1.4 20 109 A T T 45S+ 0 0 87 -13,-0.4 2,-2.2 3,-0.2 3,-0.4 0.079 92.8 47.8 -70.0-170.3 6.1 -0.3 2.6 21 110 A G T 45S- 0 0 77 1,-0.2 -1,-0.1 2,-0.1 -3,-0.1 -0.485 140.1 -22.9 76.4 -76.1 8.7 -3.0 3.3 22 111 A Q T 45S+ 0 0 185 -2,-2.2 -1,-0.2 -4,-0.3 -2,-0.2 -0.009 118.0 89.1-159.5 36.7 11.0 -0.7 5.3 23 112 A G T <5 + 0 0 11 -4,-1.3 -3,-0.2 -3,-0.4 -4,-0.2 0.862 47.8 130.8 -98.9 -66.6 10.3 2.9 4.3 24 113 A R < - 0 0 161 -5,-2.8 5,-0.3 3,-0.1 4,-0.2 0.086 57.0 -23.3 43.1-154.4 7.4 4.0 6.6 25 114 A T S S+ 0 0 83 1,-0.2 2,-0.1 2,-0.1 -1,-0.1 -0.980 112.2 36.4-144.3 152.0 7.8 7.4 8.4 26 115 A P S S+ 0 0 93 0, 0.0 -1,-0.2 0, 0.0 2,-0.2 0.556 99.0 94.8 -73.8 148.5 9.6 9.5 9.4 27 116 A A S > S- 0 0 32 -2,-0.1 3,-2.1 -3,-0.0 4,-0.4 -0.523 91.9 -10.4-161.0-130.6 11.8 8.8 6.3 28 117 A V T >> S+ 0 0 21 1,-0.3 4,-2.0 -4,-0.2 3,-0.7 0.770 118.5 78.4 -58.6 -25.6 12.3 10.4 2.8 29 118 A I H 3> S+ 0 0 27 -5,-0.3 4,-2.9 1,-0.2 -1,-0.3 0.795 82.6 65.9 -53.7 -29.7 9.0 12.3 3.6 30 119 A K H <> S+ 0 0 141 -3,-2.1 4,-2.4 1,-0.2 -1,-0.2 0.953 105.5 40.3 -57.2 -52.0 11.2 14.6 5.7 31 120 A K H <> S+ 0 0 89 -3,-0.7 4,-2.7 -4,-0.4 -2,-0.2 0.883 113.6 54.9 -65.2 -40.2 13.1 15.8 2.6 32 121 A A H <>S+ 0 0 5 -4,-2.0 5,-1.7 1,-0.2 6,-0.7 0.941 113.0 41.5 -58.5 -49.0 9.8 15.9 0.6 33 122 A M H ><5S+ 0 0 132 -4,-2.9 3,-1.5 3,-0.3 -2,-0.2 0.879 111.9 56.6 -66.1 -39.2 8.2 18.2 3.2 34 123 A D H 3<5S+ 0 0 105 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.943 110.8 42.4 -58.0 -50.0 11.4 20.2 3.6 35 124 A E T 3<5S- 0 0 71 -4,-2.7 -1,-0.3 -5,-0.1 -2,-0.2 0.312 126.3-107.4 -80.1 10.5 11.4 21.0 -0.2 36 125 A Q T < 5S- 0 0 176 -3,-1.5 -3,-0.3 -5,-0.1 -2,-0.1 0.982 77.4 -37.0 63.6 64.9 7.6 21.6 0.2 37 126 A G S > S+ 0 0 23 -7,-0.1 4,-1.6 3,-0.0 -1,-0.2 0.043 73.3 135.7-161.7 33.6 7.3 14.7 -5.2 40 129 A L T <4 S+ 0 0 99 -3,-0.6 4,-0.3 1,-0.2 3,-0.3 0.974 95.6 12.0 -52.5 -65.9 3.6 14.6 -4.2 41 130 A D T >4 S+ 0 0 107 1,-0.2 3,-0.7 -4,-0.2 -1,-0.2 0.744 122.9 68.4 -83.2 -26.4 2.4 12.9 -7.4 42 131 A D G >4 S+ 0 0 73 1,-0.2 3,-0.8 4,-0.1 -2,-0.2 0.692 80.2 81.2 -67.5 -17.9 5.9 12.1 -8.5 43 132 A F G 3< S+ 0 0 17 -4,-1.6 2,-1.7 1,-0.3 -1,-0.2 0.944 90.8 49.6 -50.5 -53.8 6.1 9.6 -5.6 44 133 A L G < S- 0 0 61 -3,-0.7 -1,-0.3 -4,-0.3 -2,-0.1 -0.356 123.8-105.0 -84.7 56.5 4.2 7.0 -7.6 45 134 A I S < S- 0 0 90 -2,-1.7 2,-0.4 -3,-0.8 -1,-0.2 -0.203 72.4 -28.6 54.3-146.5 6.6 7.5 -10.6 46 135 A K 0 0 143 -3,-0.1 -4,-0.1 0, 0.0 -1,-0.0 -0.877 360.0 360.0-105.7 133.5 5.0 9.6 -13.5 47 136 A Q 0 0 184 -2,-0.4 -2,-0.0 0, 0.0 -6,-0.0 -0.634 360.0 360.0 -80.4 360.0 1.3 9.5 -14.1