==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 04-APR-92 2HOA . COMPND 2 MOLECULE: ANTENNAPEDIA PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR P.GUNTERT,Y.-Q.QIAN,G.OTTING,M.MULLER,W.J.GEHRING,K.WUTHRICH . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6148.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 58.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A M 0 0 233 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 163.1 -25.0 -15.5 5.2 2 1 A R + 0 0 197 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.254 360.0 156.1-163.3 -96.5 -23.0 -12.5 3.7 3 2 A K - 0 0 125 1,-0.1 3,-0.1 -2,-0.1 -1,-0.0 0.917 14.5-177.4 50.0 74.4 -19.7 -12.9 1.7 4 3 A R - 0 0 197 1,-0.1 2,-0.3 3,-0.1 -1,-0.1 0.812 62.9 -36.0 -69.9 -31.8 -19.6 -9.7 -0.5 5 4 A G - 0 0 15 2,-0.2 -1,-0.1 0, 0.0 -2,-0.0 -0.944 61.2 -89.6-173.5-173.2 -16.3 -10.7 -2.2 6 5 A R S S+ 0 0 217 -2,-0.3 2,-0.4 -3,-0.1 -2,-0.0 -0.243 83.0 112.1-107.3 37.5 -12.9 -12.4 -1.8 7 6 A Q - 0 0 127 2,-0.1 -2,-0.2 1,-0.1 -3,-0.1 -0.929 51.3-163.4-116.6 138.2 -11.0 -9.3 -0.8 8 7 A T S S+ 0 0 99 -2,-0.4 2,-0.1 2,-0.1 -1,-0.1 0.416 75.2 81.1 -91.2 -2.2 -9.5 -8.5 2.7 9 8 A Y - 0 0 68 4,-0.0 2,-0.3 3,-0.0 -2,-0.1 -0.431 69.9-138.0-101.5 172.3 -9.3 -4.8 1.6 10 9 A T > - 0 0 90 -2,-0.1 4,-3.1 1,-0.1 5,-0.2 -0.850 27.5-105.1-128.6 162.6 -11.9 -2.0 1.6 11 10 A R H > S+ 0 0 195 -2,-0.3 4,-3.0 2,-0.2 5,-0.1 0.961 119.3 40.3 -49.8 -66.9 -12.7 0.8 -0.9 12 11 A Y H > S+ 0 0 143 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.952 116.3 52.0 -50.5 -56.9 -11.2 3.7 1.0 13 12 A Q H > S+ 0 0 26 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.890 112.3 44.5 -41.2 -58.7 -8.2 1.6 2.0 14 13 A T H X S+ 0 0 47 -4,-3.1 4,-2.9 2,-0.2 -1,-0.2 0.908 110.7 56.5 -61.5 -41.5 -7.6 0.5 -1.6 15 14 A L H X S+ 0 0 78 -4,-3.0 4,-3.0 -5,-0.2 5,-0.2 0.959 111.8 40.5 -52.6 -58.9 -8.0 4.2 -2.8 16 15 A E H X S+ 0 0 41 -4,-2.7 4,-3.0 1,-0.2 -1,-0.2 0.902 115.6 51.9 -57.2 -40.5 -5.3 5.5 -0.4 17 16 A L H X S+ 0 0 1 -4,-2.5 4,-2.7 -5,-0.3 -1,-0.2 0.902 112.1 46.5 -66.9 -37.8 -3.1 2.5 -1.3 18 17 A E H X S+ 0 0 59 -4,-2.9 4,-2.8 2,-0.2 5,-0.2 0.958 113.2 47.7 -67.2 -52.3 -3.6 3.2 -5.0 19 18 A K H X S+ 0 0 136 -4,-3.0 4,-1.5 2,-0.2 -2,-0.2 0.927 113.9 49.5 -48.6 -50.4 -2.9 6.9 -4.6 20 19 A E H X S+ 0 0 17 -4,-3.0 4,-2.4 2,-0.2 -2,-0.2 0.920 110.1 48.6 -63.4 -43.5 0.2 6.0 -2.5 21 20 A F H < S+ 0 0 0 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.887 110.8 51.6 -61.0 -40.3 1.4 3.5 -5.2 22 21 A H H < S+ 0 0 125 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.790 112.2 48.4 -62.7 -26.6 0.9 6.2 -7.8 23 22 A F H < S- 0 0 111 -4,-1.5 2,-0.3 1,-0.3 -2,-0.2 0.843 132.6 -5.3 -81.7 -36.7 3.0 8.4 -5.4 24 23 A N < - 0 0 74 -4,-2.4 -1,-0.3 -5,-0.1 -2,-0.0 -0.940 49.8-143.4-161.9 135.9 5.8 5.9 -5.0 25 24 A R S S+ 0 0 81 -2,-0.3 2,-0.3 -3,-0.1 29,-0.1 0.388 93.1 38.1 -83.2 4.6 6.4 2.2 -6.0 26 25 A Y - 0 0 149 -5,-0.1 2,-0.3 28,-0.0 25,-0.0 -0.978 63.7-168.9-150.1 151.6 8.1 1.6 -2.6 27 26 A L - 0 0 15 -2,-0.3 2,-0.1 20,-0.0 -6,-0.0 -0.983 15.0-137.3-145.9 141.0 7.6 2.7 1.0 28 27 A T > - 0 0 99 -2,-0.3 4,-2.9 1,-0.0 5,-0.2 -0.330 37.9 -91.5 -89.1 169.5 9.9 2.3 4.1 29 28 A R H > S+ 0 0 177 1,-0.2 4,-3.1 2,-0.2 5,-0.2 0.925 124.3 49.3 -47.4 -59.9 8.9 1.3 7.6 30 29 A R H > S+ 0 0 146 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.881 114.9 44.7 -51.4 -47.4 8.2 4.9 8.9 31 30 A R H > S+ 0 0 61 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.940 112.4 51.1 -62.6 -49.7 6.0 5.7 5.8 32 31 A R H X S+ 0 0 50 -4,-2.9 4,-3.0 1,-0.2 -2,-0.2 0.916 109.6 50.6 -57.2 -45.8 4.2 2.4 6.1 33 32 A I H X S+ 0 0 42 -4,-3.1 4,-2.6 2,-0.2 -1,-0.2 0.935 108.9 52.6 -54.1 -50.0 3.5 3.0 9.8 34 33 A E H X S+ 0 0 65 -4,-2.4 4,-2.6 2,-0.2 3,-0.2 0.954 110.2 46.9 -53.3 -51.5 2.2 6.5 8.7 35 34 A I H X S+ 0 0 14 -4,-2.8 4,-2.0 1,-0.2 5,-0.3 0.942 113.4 49.3 -52.6 -48.4 -0.2 4.9 6.2 36 35 A A H X>S+ 0 0 12 -4,-3.0 4,-2.4 1,-0.2 5,-0.6 0.830 111.2 49.8 -63.4 -30.5 -1.2 2.4 8.9 37 36 A H H <5S+ 0 0 172 -4,-2.6 -1,-0.2 -3,-0.2 -2,-0.2 0.855 118.0 39.4 -74.5 -35.9 -1.8 5.4 11.3 38 37 A A H <5S+ 0 0 77 -4,-2.6 -2,-0.2 -5,-0.2 -1,-0.2 0.663 131.1 28.4 -81.9 -20.6 -3.9 7.2 8.7 39 38 A L H <5S- 0 0 23 -4,-2.0 -3,-0.2 -5,-0.2 -2,-0.2 0.618 98.8-124.2-121.3 -23.5 -5.6 4.0 7.5 40 39 A S T <5 + 0 0 112 -4,-2.4 2,-0.2 -5,-0.3 -3,-0.2 0.995 65.6 113.5 70.8 72.3 -5.7 1.6 10.5 41 40 A L < - 0 0 41 -5,-0.6 2,-0.4 -8,-0.1 -1,-0.2 -0.774 65.1 -85.9-148.9-170.2 -4.0 -1.5 9.1 42 41 A T > - 0 0 71 -2,-0.2 4,-2.6 1,-0.1 5,-0.3 -0.932 25.1-125.8-118.2 139.3 -0.8 -3.6 9.6 43 42 A E H > S+ 0 0 68 -2,-0.4 4,-1.8 1,-0.2 -1,-0.1 0.718 112.2 53.9 -48.4 -31.9 2.6 -3.1 8.0 44 43 A R H > S+ 0 0 200 2,-0.2 4,-2.9 3,-0.2 -1,-0.2 0.980 109.8 42.6 -67.3 -62.4 2.5 -6.7 6.8 45 44 A Q H > S+ 0 0 68 1,-0.3 4,-2.8 2,-0.2 -2,-0.2 0.907 117.6 48.1 -54.7 -47.0 -0.9 -6.5 5.0 46 45 A I H X S+ 0 0 1 -4,-2.6 4,-3.1 2,-0.2 -1,-0.3 0.927 110.8 50.7 -58.8 -49.1 0.0 -3.1 3.5 47 46 A K H X S+ 0 0 41 -4,-1.8 4,-3.2 -5,-0.3 -2,-0.2 0.932 111.1 49.0 -57.0 -46.8 3.4 -4.5 2.4 48 47 A I H X S+ 0 0 73 -4,-2.9 4,-2.9 2,-0.2 5,-0.2 0.949 113.4 45.8 -57.7 -52.0 1.7 -7.5 0.7 49 48 A W H X S+ 0 0 25 -4,-2.8 4,-2.6 1,-0.2 -2,-0.2 0.954 114.9 47.8 -55.5 -51.1 -0.8 -5.3 -1.1 50 49 A F H X S+ 0 0 1 -4,-3.1 4,-2.1 2,-0.2 5,-0.3 0.920 111.2 51.9 -51.5 -49.1 2.0 -2.9 -2.1 51 50 A Q H X S+ 0 0 92 -4,-3.2 4,-1.9 1,-0.2 -2,-0.2 0.933 111.1 46.8 -54.8 -50.5 4.0 -5.9 -3.3 52 51 A N H X S+ 0 0 90 -4,-2.9 4,-2.5 2,-0.2 5,-0.3 0.863 106.3 60.2 -60.5 -39.0 1.1 -7.2 -5.4 53 52 A R H X S+ 0 0 65 -4,-2.6 4,-2.1 1,-0.2 -2,-0.2 0.966 114.3 33.7 -56.8 -55.2 0.5 -3.6 -6.8 54 53 A R H X S+ 0 0 28 -4,-2.1 4,-3.1 2,-0.2 -1,-0.2 0.745 111.0 67.3 -72.0 -22.7 4.0 -3.6 -8.3 55 54 A M H X S+ 0 0 101 -4,-1.9 4,-1.2 -5,-0.3 -2,-0.2 0.974 107.8 37.9 -58.9 -53.4 3.9 -7.3 -9.0 56 55 A K H >X S+ 0 0 112 -4,-2.5 3,-0.8 2,-0.2 4,-0.6 0.953 114.2 57.1 -64.3 -47.6 1.2 -6.8 -11.6 57 56 A W H >X S+ 0 0 97 -4,-2.1 3,-2.5 -5,-0.3 4,-1.7 0.944 109.8 42.8 -43.1 -63.3 2.9 -3.6 -12.8 58 57 A K H 3< S+ 0 0 127 -4,-3.1 -1,-0.3 1,-0.3 -2,-0.2 0.690 116.6 50.0 -64.4 -15.8 6.2 -5.4 -13.6 59 58 A K H << S+ 0 0 130 -4,-1.2 -1,-0.3 -3,-0.8 -2,-0.2 0.412 119.1 37.7 -95.7 2.3 4.0 -8.2 -15.1 60 59 A E H << S+ 0 0 97 -3,-2.5 2,-2.1 -4,-0.6 -2,-0.2 0.329 80.6 111.7-132.9 4.3 2.1 -5.6 -17.2 61 60 A N S < S- 0 0 60 -4,-1.7 -4,-0.1 -5,-0.2 -3,-0.1 -0.414 109.2 -74.6 -79.8 68.9 4.9 -3.1 -18.1 62 61 A K S S+ 0 0 189 -2,-2.1 -1,-0.2 1,-0.1 -2,-0.1 0.871 119.7 95.0 48.9 48.2 4.8 -4.0 -21.9 63 62 A T + 0 0 84 -4,-0.1 -1,-0.1 3,-0.0 -3,-0.1 0.559 61.3 74.2-141.4 -45.0 6.6 -7.3 -21.1 64 63 A K S S+ 0 0 115 -5,-0.2 -4,-0.0 2,-0.0 -5,-0.0 -0.245 71.0 63.8 -62.6 168.4 3.9 -10.0 -20.8 65 64 A G - 0 0 56 1,-0.2 3,-0.1 -3,-0.1 -1,-0.0 0.954 58.3-158.9 78.0 89.2 2.1 -11.3 -23.9 66 65 A E + 0 0 155 1,-0.1 -1,-0.2 0, 0.0 -2,-0.0 -0.831 17.8 172.0 -99.6 91.8 4.3 -13.2 -26.3 67 66 A P 0 0 139 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.548 360.0 360.0 -74.5 -8.0 2.6 -13.2 -29.8 68 67 A G 0 0 106 -3,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.894 360.0 360.0-177.8 360.0 5.8 -14.7 -31.1