==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 04-JAN-01 1HUF . COMPND 2 MOLECULE: TYROSINE PHOSPHATASE YOPH; . SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; . AUTHOR A.G.EVDOKIMOV,D.S.WAUGH . 123 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6466.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 88 71.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 13.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 47 38.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A L 0 0 77 0, 0.0 27,-0.0 0, 0.0 2,-0.0 0.000 360.0 360.0 360.0 163.8 20.1 38.0 8.9 2 4 A S > - 0 0 62 1,-0.1 4,-3.1 4,-0.0 5,-0.3 -0.401 360.0-111.6 -74.7 158.6 17.6 40.1 6.9 3 5 A L H > S+ 0 0 24 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.900 115.4 44.4 -46.5 -58.3 15.0 42.2 8.7 4 6 A S H > S+ 0 0 38 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.829 115.7 45.2 -67.2 -33.0 12.0 40.0 7.6 5 7 A D H > S+ 0 0 72 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.897 110.6 53.4 -83.0 -28.9 13.6 36.7 8.3 6 8 A L H X S+ 0 0 0 -4,-3.1 4,-2.7 1,-0.2 -2,-0.2 0.958 112.2 47.0 -55.9 -44.9 14.9 37.8 11.7 7 9 A H H X S+ 0 0 33 -4,-2.1 4,-3.0 -5,-0.3 5,-0.2 0.886 111.2 51.3 -64.3 -38.8 11.4 38.9 12.5 8 10 A R H X S+ 0 0 122 -4,-1.9 4,-2.3 2,-0.2 -1,-0.2 0.933 111.3 47.5 -61.1 -47.8 10.1 35.5 11.2 9 11 A Q H X S+ 0 0 34 -4,-2.9 4,-1.7 1,-0.2 -2,-0.2 0.938 115.6 44.2 -62.6 -45.9 12.5 33.7 13.4 10 12 A V H X S+ 0 0 0 -4,-2.7 4,-2.6 -5,-0.2 5,-0.2 0.935 112.0 51.8 -65.5 -45.1 11.6 35.8 16.5 11 13 A S H X S+ 0 0 8 -4,-3.0 4,-3.0 1,-0.2 -1,-0.2 0.896 107.1 55.7 -58.6 -38.1 7.8 35.6 15.9 12 14 A R H X S+ 0 0 124 -4,-2.3 4,-1.5 -5,-0.2 -1,-0.2 0.926 108.4 45.4 -61.2 -47.5 8.1 31.9 15.6 13 15 A L H <>S+ 0 0 24 -4,-1.7 5,-2.3 1,-0.2 6,-0.3 0.877 112.4 51.5 -64.4 -37.6 9.8 31.6 19.1 14 16 A V H ><>S+ 0 0 36 -4,-2.6 3,-2.2 4,-0.2 5,-0.6 0.947 108.5 52.2 -62.5 -42.0 7.2 34.0 20.6 15 17 A Q H 3<5S+ 0 0 136 -4,-3.0 -1,-0.2 1,-0.3 -2,-0.2 0.806 103.0 57.7 -64.2 -31.2 4.5 31.8 19.1 16 18 A Q T 3<5S- 0 0 128 -4,-1.5 -1,-0.3 -5,-0.1 -2,-0.2 0.223 126.9-103.5 -78.0 5.2 6.1 28.7 20.7 17 19 A E T < 5S+ 0 0 171 -3,-2.2 -3,-0.2 -5,-0.1 3,-0.2 0.783 91.7 117.4 72.9 35.1 5.6 30.6 24.0 18 20 A S T > < + 0 0 8 -5,-2.3 3,-2.0 1,-0.1 90,-0.4 0.160 31.6 118.0-109.8 17.2 9.2 31.7 24.5 19 21 A G T 3 > - 0 0 51 62,-0.2 5,-2.8 63,-0.1 3,-1.2 -0.766 41.5 -97.4-108.2 169.7 25.7 43.1 30.6 42 44 A I G > 5S+ 0 0 53 -2,-0.3 3,-2.2 1,-0.3 -1,-0.1 0.935 126.7 57.8 -48.8 -48.6 28.5 40.9 29.4 43 45 A A G 3 5S+ 0 0 102 1,-0.3 -1,-0.3 2,-0.1 -3,-0.0 0.789 111.2 40.7 -57.2 -25.8 30.3 42.1 32.6 44 46 A S G < 5S- 0 0 67 -3,-1.2 -1,-0.3 0, 0.0 -2,-0.2 0.084 135.8 -72.1-113.4 29.7 27.5 40.8 34.8 45 47 A G T < 5S+ 0 0 35 -3,-2.2 -3,-0.2 1,-0.3 -2,-0.1 0.376 77.2 144.6 109.8 -10.3 26.8 37.5 33.1 46 48 A A < - 0 0 8 -5,-2.8 -1,-0.3 1,-0.1 2,-0.1 -0.365 52.0-115.2 -63.0 144.9 25.0 38.2 29.8 47 49 A R > - 0 0 99 1,-0.1 4,-2.2 57,-0.1 3,-0.5 -0.465 15.0-119.7 -78.8 155.3 26.0 35.7 27.1 48 50 A E H > S+ 0 0 127 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.904 117.5 52.7 -57.3 -38.6 27.9 36.9 24.0 49 51 A S H > S+ 0 0 27 1,-0.2 4,-2.0 2,-0.2 -24,-2.0 0.788 105.1 54.7 -69.4 -28.0 25.0 35.5 21.9 50 52 A E H > S+ 0 0 0 -3,-0.5 4,-2.6 -26,-0.2 5,-0.2 0.925 108.1 48.8 -66.5 -45.5 22.5 37.6 24.0 51 53 A K H X S+ 0 0 83 -4,-2.2 4,-3.3 2,-0.2 5,-0.3 0.942 111.0 50.2 -61.1 -45.0 24.5 40.8 23.3 52 54 A V H X S+ 0 0 63 -4,-2.3 4,-2.3 -5,-0.2 5,-0.3 0.962 111.5 49.2 -57.0 -47.7 24.6 40.0 19.5 53 55 A F H X S+ 0 0 0 -4,-2.0 4,-2.1 -28,-0.2 -2,-0.2 0.966 114.4 43.9 -55.3 -52.6 20.8 39.4 19.6 54 56 A A H X S+ 0 0 0 -4,-2.6 4,-2.7 50,-0.3 -2,-0.2 0.939 117.1 45.3 -58.6 -51.8 20.1 42.7 21.5 55 57 A Q H X S+ 0 0 80 -4,-3.3 4,-2.6 -5,-0.2 -1,-0.2 0.823 109.5 55.8 -67.0 -26.3 22.5 44.7 19.3 56 58 A T H X S+ 0 0 27 -4,-2.3 4,-2.0 -5,-0.3 -1,-0.2 0.921 110.2 45.6 -68.9 -40.4 21.2 43.2 16.1 57 59 A V H X S+ 0 0 0 -4,-2.1 4,-0.8 -5,-0.3 3,-0.3 0.979 111.9 51.3 -68.5 -47.4 17.7 44.2 16.9 58 60 A L H >< S+ 0 0 22 -4,-2.7 3,-1.5 1,-0.2 4,-0.4 0.919 108.7 52.7 -49.3 -46.9 18.9 47.7 17.9 59 61 A S H >< S+ 0 0 76 -4,-2.6 3,-0.9 1,-0.3 -1,-0.2 0.891 106.3 53.2 -63.0 -34.9 20.7 48.0 14.6 60 62 A H H 3< S+ 0 0 53 -4,-2.0 -1,-0.3 -3,-0.3 -2,-0.2 0.624 109.0 48.9 -75.9 -11.0 17.6 47.0 12.7 61 63 A V T X< S+ 0 0 2 -3,-1.5 3,-2.3 -4,-0.8 37,-0.4 0.248 73.2 142.2-113.0 14.2 15.5 49.8 14.3 62 64 A A T < S- 0 0 61 -3,-0.9 3,-0.1 -4,-0.4 37,-0.1 -0.326 84.7 -3.2 -52.6 117.3 17.9 52.7 13.9 63 65 A N T 3 S+ 0 0 118 35,-0.4 2,-0.7 1,-0.2 -1,-0.3 0.863 95.4 144.3 66.4 31.9 15.7 55.7 13.1 64 66 A V < - 0 0 11 -3,-2.3 34,-0.5 34,-0.2 -1,-0.2 -0.913 51.4-127.8-102.5 118.0 12.5 53.6 13.2 65 67 A V - 0 0 63 -2,-0.7 2,-0.4 52,-0.1 32,-0.2 -0.476 20.6-152.1 -68.9 132.5 9.8 55.7 14.6 66 68 A L B -C 96 0C 0 30,-4.7 30,-3.2 -2,-0.2 25,-0.2 -0.907 11.3-134.7-103.4 134.3 8.1 53.8 17.4 67 69 A T > - 0 0 30 -2,-0.4 4,-2.5 28,-0.3 5,-0.2 -0.375 26.6-106.1 -81.5 162.1 4.4 54.7 18.1 68 70 A Q H > S+ 0 0 110 25,-0.3 4,-2.4 1,-0.2 5,-0.1 0.788 124.5 56.5 -59.1 -27.1 3.0 55.3 21.5 69 71 A E H > S+ 0 0 106 2,-0.2 4,-1.7 3,-0.2 -1,-0.2 0.937 108.7 45.0 -70.7 -41.4 1.4 51.9 21.1 70 72 A D H >> S+ 0 0 2 1,-0.2 4,-2.0 2,-0.2 3,-0.9 0.986 114.3 49.6 -58.4 -59.1 4.8 50.3 20.5 71 73 A T H 3X S+ 0 0 25 -4,-2.5 4,-3.3 1,-0.3 -1,-0.2 0.833 106.6 55.2 -36.7 -53.3 6.3 52.3 23.4 72 74 A A H 3X S+ 0 0 34 -4,-2.4 4,-1.9 -5,-0.2 -1,-0.3 0.902 105.5 54.1 -58.5 -36.1 3.4 51.2 25.7 73 75 A K H X S+ 0 0 2 -4,-2.0 4,-2.4 1,-0.2 3,-1.2 0.942 108.0 57.5 -56.4 -49.1 7.9 48.2 25.9 75 77 A L H 3X S+ 0 0 100 -4,-3.3 4,-2.5 1,-0.3 -1,-0.2 0.841 102.2 56.1 -53.9 -35.7 6.9 50.0 29.0 76 78 A Q H 3X S+ 0 0 109 -4,-1.9 4,-4.0 -3,-0.4 -1,-0.3 0.862 107.7 49.2 -60.0 -38.1 4.9 46.9 30.0 77 79 A S H S+ 0 0 26 -4,-2.4 5,-1.1 1,-0.2 4,-0.7 0.897 120.8 38.1 -53.0 -41.4 10.1 47.5 31.8 79 81 A V H <5S+ 0 0 92 -4,-2.5 -2,-0.2 -5,-0.3 -1,-0.2 0.903 116.3 48.0 -79.0 -45.7 7.3 47.2 34.3 80 82 A K H <5S+ 0 0 149 -4,-4.0 -2,-0.2 1,-0.2 -3,-0.2 0.863 124.6 36.1 -61.1 -31.7 6.6 43.4 34.0 81 83 A H H <5S- 0 0 46 -4,-2.8 -2,-0.2 2,-0.2 -1,-0.2 0.478 103.1-130.2-100.1 -12.5 10.4 43.0 34.3 82 84 A N T <5S+ 0 0 150 -4,-0.7 2,-0.4 -5,-0.2 -3,-0.2 0.585 77.2 98.8 72.3 9.8 11.0 45.8 36.8 83 85 A L < - 0 0 56 -5,-1.1 2,-0.7 -6,-0.5 -2,-0.2 -0.989 67.0-141.3-143.4 135.7 13.7 47.0 34.5 84 86 A N + 0 0 67 -2,-0.4 -9,-0.1 1,-0.1 -10,-0.0 -0.805 22.8 170.8 -96.9 110.3 14.1 49.7 31.8 85 87 A N + 0 0 0 -2,-0.7 17,-3.5 -11,-0.1 18,-0.5 0.606 50.9 79.1 -95.8 -11.3 16.2 48.4 29.0 86 88 A Y E -D 101 0C 3 15,-0.3 2,-0.7 16,-0.1 15,-0.2 -0.777 55.6-156.0-115.7 143.6 15.7 51.2 26.5 87 89 A D E -D 100 0C 38 13,-2.7 12,-3.0 -2,-0.4 13,-1.2 -0.887 32.1-178.7-107.8 96.1 16.9 54.6 25.8 88 90 A L E -D 98 0C 57 -2,-0.7 2,-0.6 10,-0.2 10,-0.2 -0.789 19.8-144.8-102.6 132.6 14.1 56.1 23.8 89 91 A R E -D 97 0C 119 8,-3.4 8,-1.3 -2,-0.4 2,-0.4 -0.844 22.9-121.6-100.3 125.1 14.1 59.6 22.5 90 92 A S E +D 96 0C 107 -2,-0.6 6,-0.2 6,-0.2 3,-0.1 -0.336 30.8 178.9 -58.2 111.7 10.7 61.5 22.5 91 93 A V E - 0 0 70 4,-1.3 5,-0.2 -2,-0.4 -1,-0.2 0.353 49.5 -99.0-104.5 12.4 10.1 62.3 18.9 92 94 A G E > S+D 95 0C 35 3,-0.6 3,-0.6 1,-0.0 -1,-0.1 0.388 99.3 61.7 85.1 145.2 6.8 63.9 19.6 93 95 A N T 3 S- 0 0 157 1,-0.2 -25,-0.3 2,-0.1 3,-0.1 0.779 129.6 -64.8 78.0 28.2 3.1 62.9 19.4 94 96 A G T 3 S+ 0 0 39 1,-0.3 -1,-0.2 -27,-0.1 -23,-0.2 0.463 109.1 129.1 72.3 3.9 3.9 60.2 21.9 95 97 A N E < - D 0 92C 40 -3,-0.6 -4,-1.3 -28,-0.1 -3,-0.6 -0.327 37.8-169.4 -82.2 174.1 6.2 58.6 19.3 96 98 A S E -CD 66 90C 10 -30,-3.2 -30,-4.7 -6,-0.2 2,-0.3 -0.970 20.9-140.9-156.1 164.1 9.7 57.6 20.0 97 99 A V E - D 0 89C 7 -8,-1.3 -8,-3.4 -2,-0.3 2,-0.7 -0.981 25.8-127.7-126.1 136.8 13.0 56.4 18.5 98 100 A L E + D 0 88C 6 -34,-0.5 -35,-0.4 -37,-0.4 -10,-0.2 -0.783 32.7 168.5 -85.5 117.9 15.2 53.8 20.1 99 101 A V E - 0 0 76 -12,-3.0 2,-0.3 -2,-0.7 -1,-0.2 0.708 59.7 -13.1-103.7 -23.7 18.8 55.1 20.5 100 102 A S E - D 0 87C 41 -13,-1.2 -13,-2.7 -42,-0.0 -1,-0.3 -0.997 58.8-115.7-167.7 163.4 20.4 52.6 22.8 101 103 A L E - D 0 86C 21 -2,-0.3 -15,-0.3 -15,-0.2 -16,-0.1 -0.702 10.8-146.0-102.7 159.7 19.9 49.7 25.1 102 104 A R S S+ 0 0 136 -17,-3.5 2,-0.3 -2,-0.3 -16,-0.1 0.385 81.9 26.8-105.1 4.8 20.7 49.6 28.9 103 105 A S S S- 0 0 4 -18,-0.5 -62,-0.2 2,-0.2 -63,-0.1 -0.928 77.5-113.3-147.6 177.7 21.7 46.0 28.9 104 106 A D S S+ 0 0 19 -64,-3.3 2,-0.3 -2,-0.3 -50,-0.3 -0.042 92.1 79.6 -99.4 25.1 23.1 43.2 26.8 105 107 A Q + 0 0 0 -65,-0.2 2,-0.3 -52,-0.1 -2,-0.2 -0.966 50.6 178.0-131.5 152.3 19.8 41.2 26.9 106 108 A M - 0 0 0 -2,-0.3 -83,-2.6 -83,-0.3 2,-0.1 -0.944 26.2-126.8-153.2 127.3 16.5 41.5 25.1 107 109 A T B > -A 22 0A 1 -2,-0.3 4,-1.9 -85,-0.3 -85,-0.3 -0.420 22.0-123.6 -70.6 151.8 13.4 39.3 25.4 108 110 A L H > S+ 0 0 0 -87,-2.6 4,-2.3 -90,-0.4 -88,-0.2 0.849 111.1 58.6 -63.4 -39.2 12.0 37.9 22.2 109 111 A Q H > S+ 0 0 46 -90,-3.1 4,-1.6 -88,-0.3 -1,-0.2 0.912 109.6 44.4 -58.3 -41.3 8.6 39.5 22.9 110 112 A D H > S+ 0 0 8 -91,-0.4 4,-2.1 1,-0.2 -1,-0.2 0.888 109.8 55.0 -70.0 -36.2 10.2 42.9 23.0 111 113 A A H X S+ 0 0 0 -4,-1.9 4,-3.1 1,-0.2 5,-0.3 0.900 104.7 55.4 -62.1 -37.7 12.3 42.1 19.9 112 114 A K H X S+ 0 0 50 -4,-2.3 4,-2.2 2,-0.2 5,-0.2 0.949 106.4 49.7 -61.2 -49.4 9.1 41.3 18.0 113 115 A V H X S+ 0 0 16 -4,-1.6 4,-2.0 1,-0.2 -1,-0.2 0.948 115.8 42.6 -52.2 -50.5 7.5 44.7 18.8 114 116 A L H X S+ 0 0 0 -4,-2.1 4,-1.8 1,-0.2 -1,-0.2 0.921 112.5 51.7 -68.0 -40.5 10.6 46.5 17.6 115 117 A L H X S+ 0 0 0 -4,-3.1 4,-1.5 1,-0.2 -1,-0.2 0.812 109.4 52.3 -67.4 -28.8 11.1 44.4 14.6 116 118 A E H X S+ 0 0 60 -4,-2.2 4,-3.1 -5,-0.3 -1,-0.2 0.902 104.6 53.9 -78.4 -32.6 7.5 44.9 13.6 117 119 A A H X S+ 0 0 1 -4,-2.0 4,-2.8 1,-0.2 -2,-0.2 0.928 109.5 51.4 -56.6 -42.4 7.8 48.7 13.9 118 120 A A H X S+ 0 0 4 -4,-1.8 4,-1.9 2,-0.2 -1,-0.2 0.862 110.4 46.2 -66.0 -34.9 10.8 48.3 11.5 119 121 A L H X S+ 0 0 35 -4,-1.5 4,-2.4 2,-0.2 -2,-0.2 0.941 111.0 54.2 -72.9 -44.4 8.7 46.3 9.0 120 122 A R H < S+ 0 0 89 -4,-3.1 -2,-0.2 2,-0.2 -1,-0.2 0.915 108.0 48.1 -47.5 -56.7 5.9 48.8 9.3 121 123 A Q H < S+ 0 0 92 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.906 107.8 56.3 -55.3 -46.5 8.2 51.7 8.5 122 124 A E H < 0 0 146 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.900 360.0 360.0 -48.9 -47.9 9.5 49.7 5.6 123 125 A S < 0 0 130 -4,-2.4 -3,-0.1 -3,-0.1 0, 0.0 0.090 360.0 360.0-107.8 360.0 5.9 49.4 4.4