==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 05-JAN-01 1HV2 . COMPND 2 MOLECULE: ELONGIN C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.V.BOTUYAN,G.MER,G.-S.YI,C.M.KOTH,D.A.CASE,A.M.EDWARDS, . 114 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7496.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 96 84.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 4.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 19 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 51 44.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 231 0, 0.0 2,-2.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 67.6 1.9 -1.0 3.7 2 2 A S - 0 0 90 1,-0.2 2,-2.2 2,-0.1 3,-0.2 -0.345 360.0 -79.4 -69.4 69.7 1.9 2.1 5.8 3 3 A Q - 0 0 90 -2,-2.5 -1,-0.2 1,-0.2 3,-0.1 -0.168 47.5-131.5 72.0 -46.3 5.3 3.6 4.6 4 4 A D S S+ 0 0 93 -2,-2.2 16,-2.4 15,-0.1 17,-0.3 0.302 85.8 57.1 73.1 -1.6 7.3 1.2 6.9 5 5 A F E -A 19 0A 70 14,-0.3 2,-0.3 -3,-0.2 14,-0.2 -0.987 63.7-158.9-152.4 148.8 9.2 4.4 7.9 6 6 A V E -A 18 0A 0 12,-2.8 12,-3.0 -2,-0.3 2,-0.6 -0.861 23.0-128.1-123.0 161.5 8.5 7.9 9.4 7 7 A T E -Ab 17 43A 32 35,-2.3 37,-2.9 -2,-0.3 2,-0.6 -0.917 16.4-171.1-122.0 104.6 10.8 10.9 9.1 8 8 A L E -Ab 16 44A 4 8,-2.3 8,-3.0 -2,-0.6 2,-0.4 -0.870 23.4-159.3 -90.7 120.3 11.9 12.8 12.2 9 9 A V E -Ab 15 45A 0 35,-2.9 37,-2.0 -2,-0.6 2,-0.3 -0.887 8.8-159.2-117.2 137.3 13.7 15.9 10.7 10 10 A S E > -Ab 14 46A 0 4,-2.7 4,-3.1 -2,-0.4 37,-0.3 -0.788 48.6 -40.6-113.5 155.0 16.3 18.3 12.4 11 11 A K T 4 S+ 0 0 111 38,-2.3 2,-2.3 35,-0.9 38,-0.1 0.143 127.2 11.7 30.3-126.1 17.5 21.8 11.6 12 12 A D T 4 S- 0 0 122 1,-0.2 -1,-0.2 36,-0.1 3,-0.1 -0.449 132.8 -62.8 -79.4 69.3 17.9 22.5 7.9 13 13 A D T 4 S+ 0 0 82 -2,-2.3 2,-1.0 1,-0.2 -1,-0.2 0.849 75.3 163.5 54.4 50.5 16.1 19.3 6.7 14 14 A K E < -A 10 0A 85 -4,-3.1 -4,-2.7 2,-0.0 2,-0.6 -0.845 28.9-154.2 -93.2 98.0 18.5 16.7 8.2 15 15 A E E -A 9 0A 112 -2,-1.0 2,-0.6 -6,-0.2 -6,-0.2 -0.717 15.5-164.2 -89.2 113.1 16.0 13.8 7.9 16 16 A Y E -A 8 0A 53 -8,-3.0 -8,-2.3 -2,-0.6 2,-0.6 -0.861 15.6-146.9 -91.0 122.4 16.3 10.8 10.3 17 17 A E E -A 7 0A 127 -2,-0.6 2,-0.5 -10,-0.2 -10,-0.2 -0.854 14.8-166.2 -95.8 113.8 14.3 7.9 8.9 18 18 A I E -A 6 0A 14 -12,-3.0 -12,-2.8 -2,-0.6 5,-0.0 -0.912 24.3-114.8-107.7 122.3 12.8 5.8 11.7 19 19 A S E >> -A 5 0A 46 -2,-0.5 4,-3.0 -14,-0.2 3,-1.7 -0.279 23.4-120.3 -53.2 137.4 11.3 2.3 10.9 20 20 A R H 3> S+ 0 0 51 -16,-2.4 4,-2.9 1,-0.3 5,-0.2 0.846 114.5 63.9 -44.6 -44.5 7.5 2.1 11.5 21 21 A S H 34 S+ 0 0 52 -17,-0.3 -1,-0.3 1,-0.2 4,-0.2 0.828 113.3 32.4 -52.8 -39.6 8.3 -0.7 14.1 22 22 A A H X> S+ 0 0 4 -3,-1.7 3,-2.2 2,-0.1 4,-0.5 0.897 113.5 62.7 -80.6 -48.2 10.2 1.9 16.2 23 23 A A H >< S+ 0 0 0 -4,-3.0 3,-2.3 1,-0.3 7,-0.4 0.859 95.6 59.3 -43.2 -50.7 7.8 4.8 15.2 24 24 A M T 3< S+ 0 0 117 -4,-2.9 -1,-0.3 1,-0.3 -2,-0.1 0.713 89.1 72.0 -58.1 -24.2 4.8 3.1 16.7 25 25 A I T <4 S+ 0 0 27 -3,-2.2 -1,-0.3 -5,-0.2 -2,-0.2 0.821 90.4 68.7 -61.6 -30.2 6.6 3.2 20.1 26 26 A S S+ 0 0 66 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.841 89.8 64.8 -59.7 -29.9 2.1 7.4 20.3 28 28 A T H > S+ 0 0 27 70,-0.6 4,-3.1 69,-0.5 5,-0.2 0.939 102.6 43.5 -59.5 -49.3 2.9 10.9 19.3 29 29 A L H > S+ 0 0 3 68,-0.4 4,-2.8 -6,-0.3 5,-0.2 0.957 113.9 52.4 -56.3 -50.6 4.1 9.8 15.8 30 30 A K H X S+ 0 0 105 -4,-2.0 4,-0.5 -7,-0.4 -2,-0.2 0.861 114.9 41.7 -55.1 -40.7 1.1 7.4 15.6 31 31 A A H >X S+ 0 0 55 -4,-2.8 4,-2.7 2,-0.2 3,-1.6 0.968 112.8 52.5 -68.1 -55.6 -1.2 10.4 16.4 32 32 A M H 3< S+ 0 0 47 -4,-3.1 8,-0.3 1,-0.3 7,-0.2 0.882 107.0 51.7 -52.9 -46.8 0.6 12.9 14.2 33 33 A I H 3< S+ 0 0 31 -4,-2.8 -1,-0.3 1,-0.2 -2,-0.2 0.736 120.0 36.9 -61.9 -23.1 0.4 10.6 11.1 34 34 A E H << S+ 0 0 111 -3,-1.6 3,-0.4 -4,-0.5 -2,-0.2 0.718 118.9 46.0-100.6 -30.9 -3.4 10.2 11.7 35 35 A G S < S+ 0 0 40 -4,-2.7 2,-2.3 1,-0.2 3,-0.3 0.925 127.4 16.3 -81.5 -90.4 -4.4 13.8 12.9 36 36 A P S >> S+ 0 0 39 0, 0.0 4,-2.6 0, 0.0 3,-2.4 -0.319 84.4 153.7 -74.5 55.8 -2.9 16.5 10.7 37 37 A F T 34 + 0 0 101 -2,-2.3 4,-0.2 -3,-0.4 -2,-0.1 0.714 59.8 68.4 -71.3 -18.8 -2.3 13.7 8.2 38 38 A R T 34 S+ 0 0 165 -3,-0.3 -1,-0.3 2,-0.1 -5,-0.1 0.701 122.5 16.4 -60.9 -19.7 -2.4 16.2 5.3 39 39 A E T <4 S+ 0 0 143 -3,-2.4 2,-1.3 -7,-0.2 -2,-0.2 0.739 124.0 47.7-120.4 -62.3 0.9 17.4 6.8 40 40 A S >< + 0 0 24 -4,-2.6 2,-2.5 -8,-0.3 3,-0.6 -0.169 64.0 158.8 -88.6 44.4 2.6 15.1 9.3 41 41 A K T 3 S- 0 0 119 -2,-1.3 -8,-0.1 1,-0.3 -1,-0.1 -0.369 91.5 -39.9 -74.1 73.1 2.3 12.0 7.1 42 42 A G T 3 S+ 0 0 1 -2,-2.5 -35,-2.3 1,-0.2 2,-0.3 0.890 123.0 115.2 64.9 42.0 5.1 10.1 8.8 43 43 A R E < +b 7 0A 61 -3,-0.6 2,-0.4 -37,-0.2 -1,-0.2 -0.976 38.5 175.3-142.3 126.4 7.0 13.5 9.0 44 44 A I E -b 8 0A 4 -37,-2.9 -35,-2.9 -2,-0.3 2,-1.2 -0.872 13.3-165.9-131.9 94.3 7.9 15.4 12.1 45 45 A E E +b 9 0A 87 -2,-0.4 2,-1.7 -37,-0.2 -35,-0.2 -0.658 15.7 174.5 -89.9 91.5 10.0 18.4 11.2 46 46 A L E > +b 10 0A 13 -37,-2.0 2,-2.8 -2,-1.2 3,-1.9 -0.415 16.9 179.6 -87.9 59.1 11.6 19.8 14.4 47 47 A K T 3 S+ 0 0 122 -2,-1.7 -37,-0.1 1,-0.3 -1,-0.1 -0.322 70.3 43.9 -71.7 64.5 13.4 22.2 12.0 48 48 A Q T 3 S+ 0 0 145 -2,-2.8 -1,-0.3 1,-0.5 2,-0.2 0.094 88.5 92.0-176.4 -41.8 15.3 23.9 14.8 49 49 A F S < S- 0 0 31 -3,-1.9 -38,-2.3 -40,-0.2 -1,-0.5 -0.509 84.2-108.9 -72.1 143.9 16.5 21.0 17.0 50 50 A D >> - 0 0 48 -40,-0.2 4,-2.7 -2,-0.2 3,-1.1 -0.547 14.0-122.5 -87.2 141.9 20.0 19.9 16.0 51 51 A S H 3> S+ 0 0 18 1,-0.3 4,-3.2 -2,-0.2 5,-0.2 0.822 110.4 54.8 -45.5 -46.9 20.8 16.6 14.2 52 52 A H H 3> S+ 0 0 86 2,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.858 114.2 42.3 -64.7 -31.3 23.2 15.3 16.9 53 53 A I H X> S+ 0 0 5 -3,-1.1 4,-2.4 2,-0.2 3,-0.6 0.963 115.3 47.6 -72.7 -55.6 20.5 15.8 19.5 54 54 A L H 3X S+ 0 0 3 -4,-2.7 4,-3.1 1,-0.3 5,-0.3 0.906 106.5 60.6 -54.2 -43.4 17.6 14.4 17.4 55 55 A E H 3X S+ 0 0 94 -4,-3.2 4,-2.6 -5,-0.2 -1,-0.3 0.891 108.0 43.0 -47.3 -50.1 19.9 11.4 16.6 56 56 A K H > - 0 0 70 0, 0.0 4,-1.6 0, 0.0 3,-1.4 -0.280 23.6-115.6 -53.1 143.5 26.0 13.7 28.0 84 84 A T H 3> S+ 0 0 67 1,-0.3 4,-1.4 2,-0.2 26,-0.0 0.867 115.9 60.0 -49.1 -47.8 24.9 16.8 29.9 85 85 A E H 3> S+ 0 0 137 1,-0.2 4,-0.6 2,-0.2 -1,-0.3 0.837 107.0 47.6 -49.2 -40.0 25.3 18.9 26.8 86 86 A M H X> S+ 0 0 21 -3,-1.4 4,-3.2 1,-0.2 3,-1.5 0.978 100.9 63.7 -66.9 -56.9 22.7 16.7 25.1 87 87 A S H 3X S+ 0 0 1 -4,-1.6 4,-2.7 1,-0.3 5,-0.2 0.764 91.5 66.1 -36.6 -49.8 20.1 16.8 28.0 88 88 A L H 3< S+ 0 0 116 -4,-1.4 4,-0.3 1,-0.2 -1,-0.3 0.859 123.1 14.2 -42.8 -54.7 19.6 20.6 27.6 89 89 A E H XX S+ 0 0 60 -3,-1.5 4,-1.7 -4,-0.6 3,-1.4 0.808 118.2 69.7 -93.7 -38.3 18.0 20.3 24.1 90 90 A L H 3X S+ 0 0 0 -4,-3.2 4,-3.4 1,-0.3 5,-0.3 0.821 90.0 66.8 -50.5 -34.6 17.3 16.5 24.2 91 91 A L H 3X S+ 0 0 78 -4,-2.7 4,-2.5 -5,-0.3 -1,-0.3 0.914 104.2 42.6 -49.6 -48.5 14.7 17.3 26.8 92 92 A L H <> S+ 0 0 84 -3,-1.4 4,-2.9 -4,-0.3 -2,-0.2 0.937 115.0 48.4 -70.2 -46.6 12.6 19.1 24.2 93 93 A A H X S+ 0 0 2 -4,-1.7 4,-3.0 2,-0.2 -2,-0.2 0.948 113.6 48.5 -55.2 -49.9 13.2 16.5 21.5 94 94 A A H X S+ 0 0 3 -4,-3.4 4,-2.8 2,-0.2 5,-0.3 0.896 110.4 51.6 -56.6 -46.0 12.3 13.7 24.0 95 95 A D H < S+ 0 0 89 -4,-2.5 -2,-0.2 -5,-0.3 -1,-0.2 0.940 112.1 45.4 -59.0 -47.6 9.1 15.7 25.0 96 96 A Y H < S+ 0 0 82 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.926 114.2 49.0 -61.2 -44.4 8.1 16.0 21.3 97 97 A L H < S+ 0 0 6 -4,-3.0 -69,-0.5 -5,-0.2 -68,-0.4 0.885 86.8 179.5 -59.6 -43.3 8.9 12.3 20.8 98 98 A S < 0 0 32 -4,-2.8 -70,-0.6 -5,-0.2 -3,-0.1 0.823 360.0 360.0 37.2 67.9 6.8 11.5 24.0 99 99 A I 0 0 90 -5,-0.3 -73,-0.2 -73,-0.2 -1,-0.1 -0.354 360.0 360.0 -51.8 360.0 7.0 7.7 24.3 100 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 101 157 B T > 0 0 70 0, 0.0 4,-3.0 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -75.4 12.3 6.6 30.3 102 158 B L H > + 0 0 3 1,-0.2 4,-3.1 2,-0.2 5,-0.2 0.923 360.0 50.5 -53.3 -47.9 14.3 9.0 28.1 103 159 B K H > S+ 0 0 90 2,-0.2 4,-3.0 1,-0.2 -1,-0.2 0.896 110.3 49.8 -54.9 -45.1 12.7 11.9 30.1 104 160 B E H > S+ 0 0 121 2,-0.2 4,-3.1 1,-0.2 -2,-0.2 0.963 112.1 46.7 -62.9 -51.3 13.8 10.1 33.4 105 161 B R H X S+ 0 0 74 -4,-3.0 4,-2.8 2,-0.2 -2,-0.2 0.951 115.3 46.4 -52.4 -54.6 17.4 9.7 32.1 106 162 B C H X S+ 0 0 0 -4,-3.1 4,-3.0 1,-0.2 -1,-0.2 0.932 113.4 49.0 -53.9 -50.6 17.5 13.3 30.9 107 163 B L H X S+ 0 0 113 -4,-3.0 4,-3.2 2,-0.2 -1,-0.2 0.912 110.7 50.6 -57.4 -46.5 16.0 14.5 34.2 108 164 B Q H X S+ 0 0 101 -4,-3.1 4,-2.9 2,-0.2 -1,-0.2 0.928 112.1 47.4 -57.6 -47.8 18.5 12.5 36.3 109 165 B V H X S+ 0 0 19 -4,-2.8 4,-2.8 2,-0.2 -2,-0.2 0.958 114.1 46.4 -59.8 -50.9 21.4 14.0 34.2 110 166 B V H X S+ 0 0 46 -4,-3.0 4,-2.9 2,-0.2 5,-0.2 0.946 113.4 49.4 -54.8 -51.4 20.0 17.5 34.6 111 167 B R H X S+ 0 0 186 -4,-3.2 4,-3.0 1,-0.2 -1,-0.2 0.926 111.8 48.8 -53.3 -49.1 19.5 16.9 38.4 112 168 B S H < S+ 0 0 69 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.899 112.3 48.7 -58.2 -44.5 23.0 15.6 38.6 113 169 B L H < S+ 0 0 95 -4,-2.8 -2,-0.2 2,-0.2 -1,-0.2 0.911 114.6 44.7 -61.6 -46.9 24.4 18.6 36.8 114 170 B V H < 0 0 120 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.904 360.0 360.0 -64.8 -44.9 22.4 21.0 39.0 115 171 B K < 0 0 205 -4,-3.0 -2,-0.2 -5,-0.2 -1,-0.2 0.885 360.0 360.0 -57.4 360.0 23.4 19.2 42.2