==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 28-JUL-06 2HVF . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L9; . SOURCE 2 SYNTHETIC: YES; . AUTHOR B.ANIL,E.Y.KIM,J.H.CHO,H.SCHINDELIN,D.P.RALEIGH . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3909.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 71.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 19.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 28.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 46 0, 0.0 20,-2.5 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 149.0 10.6 20.6 8.5 2 2 A K E +A 20 0A 127 18,-0.3 37,-2.5 37,-0.2 2,-0.3 -0.661 360.0 178.7 -82.2 131.8 7.7 20.3 6.1 3 3 A V E -AB 19 38A 0 16,-2.5 16,-2.2 -2,-0.4 2,-0.5 -0.908 30.1-129.6-130.7 159.1 6.2 16.8 6.0 4 4 A I E -AB 18 37A 6 33,-2.8 33,-1.9 -2,-0.3 2,-0.4 -0.958 29.4-133.7-106.8 117.8 3.3 15.1 4.3 5 5 A F E - B 0 36A 2 12,-2.8 11,-3.0 -2,-0.5 31,-0.3 -0.600 23.8-180.0 -76.1 127.0 1.1 13.1 6.8 6 6 A L S S+ 0 0 49 29,-2.4 2,-0.3 -2,-0.4 30,-0.2 0.574 74.5 19.6 -93.3 -17.2 0.3 9.6 5.7 7 7 A K S S- 0 0 114 28,-1.4 -1,-0.2 7,-0.1 2,-0.1 -0.971 93.1 -90.1-146.9 153.0 -1.8 8.9 8.9 8 8 A D - 0 0 106 -2,-0.3 2,-0.4 6,-0.2 6,-0.2 -0.473 33.6-168.6 -62.6 141.3 -3.4 10.9 11.6 9 9 A V B >> -C 13 0B 14 4,-3.0 3,-2.7 -2,-0.1 4,-2.5 -0.932 28.8-120.5-133.5 105.5 -1.2 11.7 14.6 10 10 A K T 34 S+ 0 0 210 -2,-0.4 4,-0.1 1,-0.3 -2,-0.0 -0.176 94.8 10.1 -52.0 128.6 -3.3 13.1 17.4 11 11 A G T 34 S+ 0 0 82 1,-0.1 -1,-0.3 2,-0.0 3,-0.1 0.335 130.4 53.0 86.6 -7.8 -2.1 16.6 18.4 12 12 A K T <4 S- 0 0 94 -3,-2.7 2,-0.3 1,-0.4 -2,-0.2 0.678 108.6 -29.2-127.8 -42.4 0.2 17.0 15.4 13 13 A G B < -C 9 0B 7 -4,-2.5 -4,-3.0 5,-0.0 -1,-0.4 -0.989 43.8-119.1-175.6 165.8 -1.5 16.4 12.0 14 14 A K > - 0 0 131 -2,-0.3 3,-2.3 -6,-0.2 -9,-0.3 -0.906 48.9 -83.2-119.2 147.6 -4.1 14.6 9.9 15 15 A K T 3 S+ 0 0 150 -2,-0.3 -9,-0.2 1,-0.3 3,-0.1 -0.205 116.7 22.6 -46.7 130.6 -3.7 12.3 7.0 16 16 A G T 3 S+ 0 0 56 -11,-3.0 -1,-0.3 1,-0.3 2,-0.1 0.102 91.2 126.8 97.7 -22.2 -3.2 14.3 3.8 17 17 A E < - 0 0 73 -3,-2.3 -12,-2.8 -13,-0.1 2,-0.5 -0.420 46.4-154.1 -69.1 144.0 -1.9 17.5 5.5 18 18 A I E +A 4 0A 87 -14,-0.2 2,-0.3 -2,-0.1 -14,-0.2 -0.981 38.6 135.5-115.9 117.8 1.3 19.1 4.4 19 19 A K E -A 3 0A 71 -16,-2.2 -16,-2.5 -2,-0.5 2,-0.3 -0.988 53.6 -88.6-161.1 162.8 2.8 21.1 7.3 20 20 A N E +A 2 0A 115 -2,-0.3 2,-0.3 -18,-0.3 -18,-0.3 -0.579 42.7 169.4 -79.8 137.6 5.8 22.1 9.3 21 21 A V - 0 0 13 -20,-2.5 2,-0.0 -2,-0.3 -9,-0.0 -0.919 45.2 -71.6-136.9 166.5 6.8 20.1 12.3 22 22 A A > - 0 0 61 -2,-0.3 4,-2.3 1,-0.1 3,-0.3 -0.360 40.9-131.0 -56.7 134.5 9.8 19.9 14.7 23 23 A D H > S+ 0 0 92 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.894 105.9 50.5 -57.5 -45.8 12.8 18.3 12.9 24 24 A G H > S+ 0 0 41 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.824 109.2 51.0 -60.4 -35.6 13.4 15.9 15.8 25 25 A Y H >>S+ 0 0 62 -3,-0.3 5,-2.0 2,-0.2 4,-1.4 0.906 112.2 46.3 -71.6 -44.3 9.8 14.8 15.9 26 26 A A H <>S+ 0 0 0 -4,-2.3 5,-3.0 3,-0.2 6,-0.5 0.945 117.9 42.6 -58.5 -50.7 9.8 14.0 12.2 27 27 A N H <5S+ 0 0 88 -4,-2.7 5,-0.3 -5,-0.2 -2,-0.2 0.948 122.2 35.0 -67.7 -45.4 13.1 12.2 12.2 28 28 A N H <5S+ 0 0 131 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.605 136.2 8.9 -88.3 -16.4 12.7 10.1 15.4 29 29 A F T X5S+ 0 0 76 -4,-1.4 4,-2.2 -5,-0.2 6,-0.3 0.602 122.3 45.2-129.0 -62.6 9.0 9.4 15.2 30 30 A L H >XS+ 0 0 0 -5,-2.0 5,-2.5 1,-0.2 6,-1.0 0.942 122.2 34.8 -61.1 -51.8 7.0 10.3 12.0 31 31 A F H >4 - 0 0 34 -2,-1.3 4,-2.6 1,-0.1 5,-0.3 -0.917 64.1-111.3-125.0 155.2 10.1 17.4 -1.1 41 41 A P H > S+ 0 0 113 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.924 119.8 52.5 -56.5 -38.0 9.0 17.9 -4.7 42 42 A A H > S+ 0 0 67 1,-0.2 4,-2.2 2,-0.2 5,-0.1 0.878 111.3 46.7 -61.3 -38.9 10.1 14.3 -5.5 43 43 A N H > S+ 0 0 51 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.889 110.5 50.8 -73.0 -40.5 8.1 12.9 -2.6 44 44 A L H X S+ 0 0 57 -4,-2.6 4,-2.1 2,-0.2 -2,-0.2 0.931 112.3 48.1 -61.7 -42.9 5.0 14.9 -3.5 45 45 A K H X S+ 0 0 161 -4,-2.4 4,-1.6 -5,-0.3 -2,-0.2 0.935 113.5 46.6 -62.3 -46.3 5.2 13.7 -7.0 46 46 A A H X S+ 0 0 43 -4,-2.2 4,-2.0 -5,-0.2 -1,-0.2 0.905 110.5 52.8 -63.7 -38.8 5.7 10.1 -6.0 47 47 A L H X S+ 0 0 31 -4,-2.7 4,-2.6 1,-0.2 5,-0.2 0.900 104.3 55.2 -67.0 -36.3 2.9 10.2 -3.4 48 48 A E H X S+ 0 0 110 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.892 109.6 48.8 -64.5 -37.6 0.4 11.5 -6.0 49 49 A A H < S+ 0 0 68 -4,-1.6 -1,-0.2 2,-0.2 -2,-0.2 0.904 110.4 49.5 -62.7 -44.2 1.3 8.5 -8.2 50 50 A Q H < S+ 0 0 147 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.845 110.0 51.0 -70.2 -30.9 0.9 6.1 -5.3 51 51 A K H < 0 0 152 -4,-2.6 -1,-0.2 -5,-0.1 -2,-0.2 0.895 360.0 360.0 -67.9 -41.7 -2.5 7.7 -4.5 52 52 A Q < 0 0 211 -4,-2.1 -3,-0.1 -5,-0.2 -2,-0.0 0.562 360.0 360.0 -80.1 360.0 -3.6 7.2 -8.1