==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 11-JAN-01 1HX7 . COMPND 2 MOLECULE: TRANSPOSON GAMMA-DELTA RESOLVASE; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR B.PAN,G.P.MULLEN . 105 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6940.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 61.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 12 11.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 12.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 21.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 140 0, 0.0 2,-0.3 0, 0.0 58,-0.2 0.000 360.0 360.0 360.0 130.9 -1.8 13.4 5.1 2 2 A R - 0 0 71 54,-0.1 58,-1.7 56,-0.1 2,-0.8 -0.848 360.0-112.7-133.0 170.3 -4.5 10.8 6.0 3 3 A L E +a 60 0A 60 -2,-0.3 26,-1.6 56,-0.1 2,-0.3 -0.740 43.9 169.3-107.2 86.3 -4.5 7.1 7.1 4 4 A F E -a 61 0A 4 56,-1.7 58,-3.0 -2,-0.8 2,-0.3 -0.734 10.7-169.5 -97.4 145.9 -6.1 5.2 4.2 5 5 A G E -ab 62 33A 0 27,-1.6 29,-1.6 -2,-0.3 2,-0.4 -0.977 13.4-141.7-134.8 148.5 -6.0 1.3 4.1 6 6 A Y E +ab 63 34A 10 56,-2.1 58,-0.6 -2,-0.3 2,-0.3 -0.895 27.0 167.1-110.7 137.5 -6.9 -1.2 1.4 7 7 A A - 0 0 6 27,-1.7 2,-0.3 -2,-0.4 40,-0.1 -0.940 17.2-171.0-143.3 166.7 -8.6 -4.5 2.2 8 8 A R - 0 0 62 -2,-0.3 29,-0.2 27,-0.3 2,-0.1 -0.846 30.8-116.9-162.5 120.3 -10.4 -7.4 0.4 9 9 A V + 0 0 13 27,-2.5 29,-0.1 -2,-0.3 3,-0.1 -0.377 35.6 168.1 -60.9 129.1 -12.4 -10.3 1.9 10 10 A S + 0 0 81 -2,-0.1 2,-0.3 1,-0.1 -1,-0.2 0.647 60.0 55.5-114.7 -26.9 -10.7 -13.6 1.1 11 11 A T S > S- 0 0 66 1,-0.1 4,-0.6 2,-0.1 5,-0.2 -0.803 79.2-127.8-108.4 151.4 -12.5 -16.0 3.4 12 12 A S T 4 S+ 0 0 115 -2,-0.3 -1,-0.1 2,-0.1 3,-0.1 0.832 93.2 77.3 -65.1 -28.8 -16.3 -16.6 3.6 13 13 A Q T 4 S- 0 0 140 1,-0.2 2,-3.1 2,-0.1 3,-0.4 0.247 121.7 -48.9 -62.5-161.1 -16.1 -15.9 7.4 14 14 A Q T > S+ 0 0 124 1,-0.2 4,-1.2 2,-0.1 -1,-0.2 -0.297 82.0 147.7 -72.7 63.6 -15.8 -12.4 8.7 15 15 A S H >X + 0 0 1 -2,-3.1 4,-2.0 -4,-0.6 3,-0.9 0.970 65.6 55.7 -65.2 -52.4 -12.9 -11.6 6.3 16 16 A L H 3> S+ 0 0 48 -3,-0.4 4,-2.5 1,-0.3 5,-0.2 0.896 109.1 48.7 -48.6 -41.6 -13.7 -7.9 5.9 17 17 A D H 3> S+ 0 0 104 1,-0.2 4,-1.7 2,-0.2 -1,-0.3 0.844 108.8 54.5 -68.7 -29.7 -13.5 -7.5 9.7 18 18 A I H S+ 0 0 1 -4,-2.4 4,-2.3 -3,-0.3 5,-1.2 0.943 114.7 48.1 -73.7 -46.8 -5.3 -2.0 8.6 24 24 A K H <5S+ 0 0 95 -4,-3.2 -2,-0.2 3,-0.3 -3,-0.2 0.931 111.3 51.1 -60.3 -42.1 -6.1 -0.4 12.0 25 25 A D H <5S+ 0 0 130 -4,-2.4 -1,-0.2 -5,-0.3 -2,-0.2 0.885 111.2 49.4 -61.9 -34.7 -3.3 -2.6 13.6 26 26 A A H <5S- 0 0 38 -4,-1.3 -1,-0.2 -5,-0.2 -2,-0.2 0.844 135.2 -89.5 -72.4 -33.3 -1.1 -1.2 10.8 27 27 A G T <5S+ 0 0 33 -4,-2.3 2,-0.4 1,-0.2 -3,-0.3 0.630 78.2 140.6 124.5 44.9 -2.2 2.3 11.6 28 28 A V < - 0 0 5 -5,-1.2 2,-0.2 -8,-0.2 -1,-0.2 -0.909 52.0-116.3-117.2 144.3 -5.2 3.0 9.4 29 29 A K > - 0 0 95 -26,-1.6 3,-0.9 -2,-0.4 -24,-0.2 -0.564 16.3-135.4 -78.0 138.6 -8.4 4.9 10.4 30 30 A A G > S+ 0 0 59 1,-0.3 3,-0.8 -2,-0.2 -1,-0.1 0.886 107.9 57.8 -61.5 -35.6 -11.6 2.8 10.5 31 31 A N G 3 S+ 0 0 152 1,-0.3 2,-0.3 3,-0.0 -1,-0.3 0.788 107.1 50.4 -65.8 -24.0 -13.4 5.7 8.7 32 32 A R G < S+ 0 0 50 -3,-0.9 -27,-1.6 -29,-0.2 2,-0.7 -0.430 75.0 128.5-111.0 58.9 -10.8 5.3 5.9 33 33 A I E < -b 5 0A 26 -3,-0.8 2,-1.8 -2,-0.3 -27,-0.1 -0.770 33.4-175.7-115.1 88.1 -11.0 1.5 5.3 34 34 A F E +b 6 0A 40 -29,-1.6 -27,-1.7 -2,-0.7 17,-0.1 -0.562 22.5 163.8 -83.6 82.0 -11.5 0.9 1.5 35 35 A T - 0 0 29 -2,-1.8 2,-0.4 -29,-0.3 -27,-0.3 -0.220 35.8-120.3 -88.3-175.7 -11.9 -2.9 1.6 36 36 A D - 0 0 3 10,-0.1 2,-2.8 11,-0.1 -27,-2.5 -0.947 5.3-146.7-132.5 114.2 -13.4 -5.1 -1.1 37 37 A K + 0 0 119 -2,-0.4 8,-0.1 1,-0.2 -29,-0.1 -0.331 30.0 167.1 -76.1 64.2 -16.4 -7.3 -0.5 38 38 A A + 0 0 35 -2,-2.8 2,-2.2 1,-0.2 -1,-0.2 0.767 58.9 84.7 -51.0 -24.0 -15.2 -10.0 -2.9 39 39 A S S S+ 0 0 77 -3,-0.2 -1,-0.2 -28,-0.1 2,-0.2 -0.434 75.1 91.9 -81.0 70.4 -17.9 -12.2 -1.3 40 40 A G S S- 0 0 47 -2,-2.2 4,-0.1 2,-0.5 -2,-0.0 -0.599 101.6 -58.2-139.2-158.7 -20.7 -11.0 -3.6 41 41 A S S S- 0 0 132 -2,-0.2 2,-0.2 2,-0.1 -3,-0.1 0.852 120.0 -12.6 -60.8 -30.4 -22.3 -11.9 -7.0 42 42 A S S S- 0 0 88 1,-0.1 -2,-0.5 0, 0.0 -1,-0.0 -0.865 102.8 -47.3-153.5-173.9 -18.8 -11.5 -8.5 43 43 A S - 0 0 108 -2,-0.2 2,-0.4 -4,-0.1 -5,-0.1 -0.276 47.8-151.6 -62.3 151.2 -15.3 -10.2 -7.7 44 44 A D + 0 0 37 -8,-0.1 2,-0.4 -4,-0.1 3,-0.4 -0.793 27.3 161.4-130.4 92.3 -15.3 -6.7 -6.2 45 45 A R + 0 0 70 -2,-0.4 4,-0.4 1,-0.2 -9,-0.1 -0.403 43.0 108.0-105.7 56.6 -12.2 -4.6 -6.9 46 46 A K > + 0 0 121 -2,-0.4 4,-2.8 2,-0.1 5,-0.4 0.586 52.6 84.5-105.6 -14.5 -13.6 -1.2 -6.1 47 47 A G H > S+ 0 0 1 -3,-0.4 4,-1.1 1,-0.2 -1,-0.1 0.851 103.5 34.9 -58.4 -30.5 -11.7 -0.6 -2.8 48 48 A L H > S+ 0 0 4 2,-0.2 4,-2.4 3,-0.2 -1,-0.2 0.803 112.6 59.2 -92.7 -31.6 -8.8 0.7 -4.9 49 49 A D H 4 S+ 0 0 92 -4,-0.4 4,-0.3 1,-0.2 -2,-0.2 0.895 116.8 34.8 -63.3 -35.8 -10.9 2.3 -7.6 50 50 A L H >< S+ 0 0 73 -4,-2.8 3,-1.1 2,-0.2 4,-0.3 0.857 114.2 57.2 -85.3 -37.0 -12.5 4.5 -4.9 51 51 A L H >X S+ 0 0 0 -4,-1.1 4,-2.1 -5,-0.4 3,-1.3 0.867 98.7 62.4 -61.9 -32.3 -9.3 4.8 -2.9 52 52 A R T 3< S+ 0 0 65 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.815 110.8 38.9 -63.4 -26.6 -7.7 6.2 -6.1 53 53 A M T <4 S+ 0 0 144 -3,-1.1 -1,-0.3 -4,-0.3 -2,-0.2 0.301 117.1 50.8-105.2 8.9 -10.2 9.1 -5.8 54 54 A K T <4 S+ 0 0 108 -3,-1.3 -2,-0.2 -4,-0.3 -3,-0.2 0.640 79.6 102.8-116.3 -25.1 -10.0 9.4 -2.0 55 55 A V < - 0 0 12 -4,-2.1 2,-0.1 -5,-0.2 3,-0.1 -0.349 62.9-144.3 -61.2 137.1 -6.2 9.6 -1.3 56 56 A E > - 0 0 100 1,-0.1 3,-1.8 4,-0.0 2,-0.5 -0.360 39.4 -65.2 -94.2 179.4 -5.2 13.2 -0.5 57 57 A E T 3 S+ 0 0 170 1,-0.3 31,-0.2 -2,-0.1 30,-0.1 -0.517 127.7 4.7 -68.3 115.0 -1.9 14.9 -1.5 58 58 A G T 3 S+ 0 0 31 29,-1.4 -1,-0.3 -2,-0.5 30,-0.2 0.785 94.8 161.1 81.9 26.9 0.9 13.0 0.4 59 59 A D < - 0 0 0 -3,-1.8 30,-3.2 -58,-0.2 2,-0.6 -0.473 37.9-127.6 -78.9 153.2 -1.7 10.5 1.8 60 60 A V E -ac 3 89A 15 -58,-1.7 -56,-1.7 28,-0.2 2,-0.9 -0.889 15.6-159.6-105.7 121.1 -0.3 7.1 3.2 61 61 A I E -a 4 0A 1 28,-2.0 2,-0.4 -2,-0.6 -56,-0.2 -0.804 8.4-160.3-101.3 99.1 -2.0 4.0 1.7 62 62 A L E -a 5 0A 16 -58,-3.0 -56,-2.1 -2,-0.9 2,-0.5 -0.622 5.9-168.9 -78.9 130.0 -1.4 1.1 4.2 63 63 A V E +ad 6 92A 5 28,-2.6 30,-1.8 -2,-0.4 2,-0.7 -0.881 14.0 176.0-124.3 102.6 -1.9 -2.3 2.5 64 64 A K - 0 0 58 -58,-0.6 2,-0.2 -2,-0.5 28,-0.1 -0.422 15.4-179.3-100.5 59.3 -1.9 -5.3 4.8 65 65 A K - 0 0 89 -2,-0.7 4,-0.1 1,-0.1 -2,-0.1 -0.400 11.2-171.5 -61.1 125.2 -2.7 -8.0 2.1 66 66 A L S S+ 0 0 78 -2,-0.2 -1,-0.1 2,-0.1 -2,-0.0 -0.230 78.3 12.1-113.0 44.5 -3.0 -11.4 3.8 67 67 A D S S- 0 0 72 -57,-0.0 2,-0.2 0, 0.0 -2,-0.1 0.021 124.1 -31.8-176.0 -60.3 -3.1 -13.6 0.7 68 68 A R - 0 0 151 1,-0.1 -2,-0.1 2,-0.0 3,-0.1 -0.763 30.0-153.0 180.0 131.3 -2.2 -11.8 -2.6 69 69 A L S S- 0 0 15 -2,-0.2 2,-0.1 1,-0.2 -1,-0.1 0.827 73.1 -69.7 -81.6 -31.3 -2.6 -8.3 -4.1 70 70 A G - 0 0 9 6,-0.1 6,-0.5 5,-0.1 2,-0.4 -0.326 43.1-159.4 143.9 131.8 -2.7 -9.6 -7.7 71 71 A R + 0 0 173 -2,-0.1 -1,-0.0 4,-0.1 0, 0.0 -0.899 59.6 70.9-139.2 109.5 -0.2 -11.2 -10.1 72 72 A D S S- 0 0 140 -2,-0.4 -2,-0.0 0, 0.0 -1,-0.0 -0.110 109.4 -11.3-174.6 -73.5 -0.8 -11.1 -13.9 73 73 A T S S- 0 0 139 0, 0.0 -3,-0.0 0, 0.0 -2,-0.0 0.742 120.9 -49.3-113.8 -54.7 -0.4 -7.8 -15.7 74 74 A A S >> S+ 0 0 27 3,-0.1 4,-3.5 2,-0.0 3,-0.9 0.119 77.8 141.1-177.8 37.9 -0.2 -5.1 -13.0 75 75 A D T 34 S+ 0 0 56 1,-0.3 4,-0.5 2,-0.2 5,-0.1 0.901 90.3 33.7 -59.6 -38.3 -3.1 -5.6 -10.5 76 76 A M T 34 S+ 0 0 52 -6,-0.5 -1,-0.3 1,-0.1 -6,-0.1 0.376 125.6 44.5 -97.6 4.8 -0.7 -4.6 -7.7 77 77 A I T <> S+ 0 0 46 -3,-0.9 4,-2.0 3,-0.1 5,-0.2 0.619 98.5 67.7-119.0 -23.6 1.2 -2.1 -9.8 78 78 A Q H >X S+ 0 0 81 -4,-3.5 4,-2.5 2,-0.2 3,-0.9 0.999 109.6 34.2 -61.2 -68.2 -1.5 -0.2 -11.6 79 79 A L H 3> S+ 0 0 10 -4,-0.5 4,-2.1 -5,-0.3 5,-0.2 0.851 115.1 61.3 -57.1 -30.9 -3.0 1.6 -8.6 80 80 A I H 3> S+ 0 0 24 1,-0.2 4,-1.9 2,-0.2 -1,-0.3 0.902 109.0 41.3 -63.8 -37.1 0.5 1.8 -7.2 81 81 A K H S+ 0 0 0 -4,-2.1 5,-2.3 -5,-0.2 4,-0.4 0.890 108.3 56.9 -80.5 -40.6 -0.8 6.8 -6.5 84 84 A D H ><5S+ 0 0 97 -4,-1.9 3,-0.6 1,-0.2 -2,-0.2 0.862 110.4 46.4 -59.1 -33.0 2.9 7.5 -7.2 85 85 A A H 3<5S+ 0 0 84 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.776 106.3 58.4 -80.6 -25.8 1.8 10.1 -9.8 86 86 A Q T 3<5S- 0 0 90 -4,-0.8 -28,-0.4 -3,-0.2 -1,-0.2 0.426 117.2-111.2 -83.6 4.2 -0.8 11.6 -7.4 87 87 A G T < 5S+ 0 0 44 -3,-0.6 -29,-1.4 -4,-0.4 2,-0.3 0.849 74.6 138.0 71.5 30.8 2.0 12.4 -4.8 88 88 A V < - 0 0 5 -5,-2.3 -1,-0.3 -30,-0.2 2,-0.2 -0.842 46.0-138.0-110.8 148.2 0.5 9.7 -2.5 89 89 A S B -c 60 0A 41 -30,-3.2 -28,-2.0 -2,-0.3 2,-0.4 -0.594 6.5-152.0 -99.4 164.3 2.6 7.2 -0.4 90 90 A I - 0 0 23 -30,-0.2 8,-0.6 -2,-0.2 9,-0.3 -0.836 5.7-156.9-140.9 101.4 1.7 3.5 0.1 91 91 A R - 0 0 123 -2,-0.4 -28,-2.6 6,-0.2 2,-0.4 -0.599 11.3-152.9 -78.7 133.5 2.9 1.7 3.2 92 92 A F B >> -d 63 0A 11 4,-0.4 4,-2.1 -2,-0.3 3,-1.4 -0.902 16.9-140.4-110.1 134.0 3.2 -2.1 2.9 93 93 A I T 34 S+ 0 0 70 -30,-1.8 -29,-0.1 -2,-0.4 -1,-0.1 0.818 96.2 79.5 -59.8 -27.2 2.8 -4.4 5.9 94 94 A D T 34 S- 0 0 122 -31,-0.4 -1,-0.3 1,-0.2 4,-0.1 0.871 130.0 -21.1 -49.9 -38.5 5.6 -6.5 4.4 95 95 A D T <4 S- 0 0 129 -3,-1.4 2,-1.0 2,-0.2 -1,-0.2 0.133 98.5 -87.8-162.2 28.5 8.1 -4.0 5.8 96 96 A G S < S+ 0 0 33 -4,-2.1 -4,-0.4 -5,-0.1 2,-0.2 -0.258 110.1 31.8 89.5 -50.7 6.3 -0.7 6.4 97 97 A I - 0 0 82 -2,-1.0 -2,-0.2 -6,-0.3 -6,-0.2 -0.786 56.6-166.3-130.8 175.7 6.8 0.6 2.9 98 98 A S S S- 0 0 69 -8,-0.6 -1,-0.1 -2,-0.2 -7,-0.1 0.561 81.7 -9.4-127.7 -70.0 7.2 -0.9 -0.6 99 99 A T + 0 0 48 -9,-0.3 2,-1.7 -19,-0.0 3,-0.3 -0.312 67.0 174.8-132.1 51.5 8.6 1.5 -3.3 100 100 A D S S- 0 0 79 1,-0.2 -11,-0.1 -10,-0.1 -3,-0.0 -0.367 79.6 -31.9 -61.3 88.3 8.6 4.9 -1.5 101 101 A G - 0 0 40 -2,-1.7 4,-0.3 1,-0.1 -1,-0.2 0.921 68.1-175.1 62.1 96.1 10.3 6.8 -4.3 102 102 A E + 0 0 162 -3,-0.3 -1,-0.1 2,-0.1 -2,-0.1 -0.020 62.5 84.7-111.0 29.9 12.7 4.4 -6.1 103 103 A M S S- 0 0 179 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.902 113.8 -50.2 -94.1 -63.3 14.2 7.0 -8.5 104 104 A G 0 0 74 0, 0.0 -2,-0.1 0, 0.0 -3,-0.1 -0.132 360.0 360.0-175.4 65.0 17.0 8.7 -6.5 105 105 A K 0 0 215 -4,-0.3 -4,-0.1 0, 0.0 -3,-0.1 0.541 360.0 360.0-124.2 360.0 16.0 10.0 -3.0