==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 19-JAN-01 1HYF . COMPND 2 MOLECULE: GUANYL-SPECIFIC RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.DE SWARTE,S.DE VOS,U.LANGHORST,J.STEYAERT,R.LORIS . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5601.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 149 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 157.2 5.5 6.0 29.8 2 2 A a - 0 0 46 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.692 360.0-158.9 -91.2 140.0 7.0 7.6 26.7 3 3 A D S S+ 0 0 91 8,-2.0 2,-0.4 1,-0.3 9,-0.2 0.813 92.8 23.1 -81.3 -32.0 6.4 6.2 23.2 4 4 A Y E S-A 11 0A 58 7,-2.2 7,-2.6 100,-0.1 2,-0.6 -0.998 71.2-164.7-134.8 127.6 9.6 8.1 22.1 5 5 A T E -A 10 0A 51 -2,-0.4 99,-1.6 5,-0.2 2,-0.8 -0.955 4.8-176.1-116.8 114.1 12.3 9.2 24.4 6 6 A b E > -A 9 0A 0 3,-2.5 3,-2.3 -2,-0.6 2,-0.8 -0.818 66.1 -65.2-109.2 89.8 14.7 11.8 23.0 7 7 A G T 3 S- 0 0 43 -2,-0.8 97,-0.1 1,-0.3 84,-0.0 -0.583 120.3 -15.9 69.0-110.7 17.4 12.3 25.6 8 8 A S T 3 S+ 0 0 124 -2,-0.8 2,-0.4 -3,-0.1 -1,-0.3 0.472 116.0 102.8-103.3 -6.5 15.3 13.8 28.4 9 9 A N E < -A 6 0A 50 -3,-2.3 -3,-2.5 1,-0.0 2,-0.5 -0.652 58.5-150.8 -85.1 135.4 12.3 14.7 26.2 10 10 A a E +A 5 0A 75 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.908 16.6 178.9-110.2 121.3 9.2 12.5 26.4 11 11 A Y E -A 4 0A 4 -7,-2.6 -7,-2.2 -2,-0.5 -8,-2.0 -0.924 15.7-150.0-123.7 146.6 6.8 12.1 23.5 12 12 A S > - 0 0 32 -2,-0.4 4,-1.8 -9,-0.2 3,-0.5 -0.641 37.7-103.9-103.5 166.0 3.6 10.1 22.9 13 13 A S H > S+ 0 0 66 1,-0.2 4,-2.4 -2,-0.2 5,-0.2 0.865 123.4 57.4 -58.4 -34.3 2.5 8.8 19.6 14 14 A S H > S+ 0 0 69 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.871 102.3 53.5 -65.4 -36.2 -0.0 11.6 19.5 15 15 A D H > S+ 0 0 57 -3,-0.5 4,-2.1 1,-0.2 -1,-0.2 0.918 110.6 47.8 -63.2 -42.5 2.7 14.2 19.8 16 16 A A H X S+ 0 0 0 -4,-1.8 4,-2.7 1,-0.2 -2,-0.2 0.915 111.7 49.3 -64.6 -43.3 4.5 12.6 16.8 17 17 A S H X S+ 0 0 69 -4,-2.4 4,-2.2 2,-0.2 -1,-0.2 0.857 110.4 50.4 -65.6 -35.9 1.3 12.5 14.7 18 18 A T H X S+ 0 0 77 -4,-2.2 4,-1.7 2,-0.2 -1,-0.2 0.941 113.6 44.4 -67.8 -46.8 0.5 16.2 15.5 19 19 A A H X S+ 0 0 8 -4,-2.1 4,-2.5 1,-0.2 -2,-0.2 0.933 113.3 51.9 -61.4 -46.9 4.0 17.3 14.5 20 20 A Q H X S+ 0 0 19 -4,-2.7 4,-2.9 1,-0.2 5,-0.2 0.897 105.9 54.3 -56.8 -44.7 4.0 15.1 11.4 21 21 A A H X S+ 0 0 57 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.901 110.7 45.6 -58.3 -43.1 0.7 16.5 10.2 22 22 A A H X S+ 0 0 24 -4,-1.7 4,-2.0 2,-0.2 -2,-0.2 0.927 114.2 48.1 -67.0 -45.6 2.0 20.1 10.4 23 23 A G H X S+ 0 0 0 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.916 112.0 48.8 -62.1 -43.7 5.2 19.2 8.6 24 24 A Y H X S+ 0 0 44 -4,-2.9 4,-2.6 1,-0.2 -1,-0.2 0.891 107.9 54.8 -64.6 -40.8 3.5 17.3 5.9 25 25 A K H X S+ 0 0 108 -4,-2.0 4,-1.8 -5,-0.2 -1,-0.2 0.930 110.3 45.3 -58.8 -46.9 1.0 20.1 5.2 26 26 A L H X>S+ 0 0 37 -4,-2.0 5,-2.4 1,-0.2 4,-0.6 0.888 111.8 53.0 -64.6 -38.2 3.8 22.7 4.7 27 27 A H H ><5S+ 0 0 43 -4,-2.1 3,-0.8 1,-0.2 -2,-0.2 0.917 109.4 48.8 -60.1 -45.2 5.7 20.2 2.5 28 28 A E H 3<5S+ 0 0 117 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.826 113.3 46.6 -65.3 -34.2 2.6 19.8 0.4 29 29 A D H 3<5S- 0 0 93 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.473 110.8-121.4 -88.4 -3.4 2.1 23.5 0.1 30 30 A G T <<5 + 0 0 68 -3,-0.8 2,-0.3 -4,-0.6 -3,-0.2 0.850 67.6 130.0 67.5 36.3 5.7 24.1 -0.8 31 31 A E < - 0 0 110 -5,-2.4 2,-0.3 -6,-0.1 -1,-0.2 -0.816 38.3-160.8-119.1 159.4 6.3 26.4 2.2 32 32 A T - 0 0 84 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.954 1.0-158.8-138.1 157.6 9.0 26.5 4.9 33 33 A V B > +B 38 0B 33 5,-2.5 5,-2.6 -2,-0.3 37,-0.2 -0.966 50.2 27.4-135.8 151.3 9.4 28.0 8.3 34 34 A G T > 5S- 0 0 28 -2,-0.3 3,-1.5 35,-0.2 38,-0.1 0.066 92.7 -72.9 85.5 162.2 12.5 28.9 10.5 35 35 A S T 3 5S+ 0 0 125 1,-0.3 -1,-0.2 36,-0.3 37,-0.1 0.714 132.5 52.4 -65.9 -22.0 16.1 29.7 9.6 36 36 A N T 3 5S- 0 0 87 -3,-0.2 -1,-0.3 4,-0.0 -2,-0.1 0.320 112.6-120.4 -96.0 7.5 16.8 26.1 8.7 37 37 A S T < 5 - 0 0 58 -3,-1.5 -3,-0.2 1,-0.1 -2,-0.1 0.959 40.7-128.4 52.7 67.2 13.8 26.0 6.3 38 38 A Y B + 0 0 33 1,-0.1 3,-1.0 2,-0.1 -2,-0.1 0.952 40.1 166.3 60.8 53.1 19.7 9.8 6.2 45 45 A Y T 3 S+ 0 0 193 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.852 73.4 65.5 -63.1 -32.7 23.5 10.0 6.3 46 46 A E T 3 S- 0 0 53 1,-0.1 -1,-0.3 55,-0.0 -2,-0.1 0.741 105.4-131.0 -61.2 -26.1 23.2 8.0 9.5 47 47 A G < - 0 0 47 -3,-1.0 -2,-0.1 1,-0.2 2,-0.1 0.874 35.8-179.5 76.5 36.5 21.9 5.0 7.5 48 48 A F - 0 0 37 1,-0.1 2,-1.2 53,-0.0 -1,-0.2 -0.432 30.4-125.7 -68.4 144.8 18.9 4.3 9.7 49 49 A D - 0 0 164 -2,-0.1 -1,-0.1 2,-0.0 2,-0.1 -0.582 35.1-178.3 -94.7 75.3 16.8 1.3 8.6 50 50 A F - 0 0 23 -2,-1.2 38,-0.1 1,-0.1 37,-0.1 -0.412 27.6-139.7 -70.8 147.0 13.4 2.9 8.3 51 51 A S S S+ 0 0 120 36,-0.3 2,-0.3 -2,-0.1 -1,-0.1 0.653 83.3 71.0 -81.8 -17.5 10.6 0.5 7.2 52 52 A V S S- 0 0 21 35,-0.1 -2,-0.1 1,-0.1 2,-0.1 -0.688 89.8-104.4 -99.1 155.4 9.0 3.0 5.0 53 53 A S - 0 0 73 -2,-0.3 30,-0.2 1,-0.1 29,-0.2 -0.345 44.7 -89.9 -79.3 158.2 10.4 4.2 1.7 54 54 A S S S+ 0 0 75 27,-0.1 2,-0.2 -4,-0.1 -1,-0.1 -0.289 77.2 99.2 -83.9 176.1 12.2 7.5 0.9 55 55 A P - 0 0 52 0, 0.0 27,-0.8 0, 0.0 2,-0.3 0.496 65.6-163.9 -63.6 154.5 12.3 10.4 0.1 56 56 A Y E -CD 42 81C 27 -14,-0.5 -14,-2.3 25,-0.2 2,-0.3 -0.833 12.4-166.8-115.4 153.4 12.4 11.5 3.7 57 57 A Y E -CD 41 80C 31 23,-2.2 23,-2.0 -2,-0.3 2,-0.4 -0.986 11.3-142.0-137.6 144.5 11.8 14.9 5.3 58 58 A E E +CD 40 79C 14 -18,-2.8 -18,-1.4 -2,-0.3 21,-0.2 -0.872 18.6 174.9-112.4 147.1 12.5 16.2 8.7 59 59 A W E - D 0 78C 1 19,-1.9 19,-3.1 -2,-0.4 -36,-0.1 -0.991 35.4-103.1-146.4 137.9 10.4 18.5 10.9 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.5 -0.332 24.2-159.8 -67.2 144.6 10.9 19.7 14.5 61 61 A I - 0 0 6 15,-1.4 2,-0.4 12,-0.3 15,-0.4 -0.994 18.4-142.8-121.1 129.0 8.9 18.2 17.3 62 62 A L > - 0 0 37 4,-0.6 3,-1.6 -2,-0.5 12,-0.1 -0.794 15.5-142.0-102.9 139.4 8.9 20.4 20.4 63 63 A S T 3 S+ 0 0 82 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.704 100.7 69.1 -66.4 -18.8 9.0 19.3 24.0 64 64 A S T 3 S- 0 0 76 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.694 109.3-122.2 -72.4 -18.9 6.5 22.1 24.8 65 65 A G S < S+ 0 0 49 -3,-1.6 -2,-0.1 1,-0.4 2,-0.1 0.334 73.3 121.9 93.3 -8.0 3.9 20.2 22.9 66 66 A D - 0 0 112 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.4 -0.421 69.9-104.3 -83.7 163.3 3.3 23.1 20.6 67 67 A V - 0 0 62 -2,-0.1 -6,-0.1 -6,-0.1 -1,-0.1 -0.716 43.2-100.5 -88.6 139.1 3.7 22.9 16.8 68 68 A Y + 0 0 7 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.349 49.4 161.2 -59.7 131.9 6.9 24.4 15.4 69 69 A S - 0 0 105 1,-0.6 -35,-0.2 -2,-0.1 2,-0.2 0.177 62.2 -61.4-137.9 14.7 6.2 27.9 13.9 70 70 A G S S+ 0 0 28 -37,-0.2 -1,-0.6 1,-0.1 2,-0.1 -0.678 91.5 76.8 127.0 177.5 9.7 29.3 13.8 71 71 A G S S+ 0 0 60 -2,-0.2 -36,-0.3 -3,-0.1 -1,-0.1 -0.411 96.9 0.5 79.9-161.6 12.4 30.2 16.2 72 72 A S - 0 0 104 1,-0.1 -2,-0.1 -2,-0.1 -38,-0.0 -0.439 57.7-158.5 -67.5 124.9 14.7 27.6 17.8 73 73 A P - 0 0 20 0, 0.0 3,-0.3 0, 0.0 -12,-0.3 0.571 28.2-144.6 -78.1 -12.5 13.8 24.0 16.5 74 74 A G - 0 0 41 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.278 36.1 -67.7 75.1-167.5 15.4 22.3 19.5 75 75 A A S S+ 0 0 28 -69,-0.1 17,-1.9 -14,-0.1 2,-0.3 0.579 102.4 87.9-100.9 -9.1 17.2 18.9 19.0 76 76 A D E + E 0 91C 3 -15,-0.4 -15,-1.4 -3,-0.3 2,-0.3 -0.671 48.1 178.2 -99.9 147.7 14.3 16.6 18.2 77 77 A R E -DE 60 90C 6 13,-2.8 13,-2.3 -2,-0.3 2,-0.4 -0.991 23.2-142.1-143.4 148.4 12.7 15.8 14.8 78 78 A V E -DE 59 89C 0 -19,-3.1 -19,-1.9 -2,-0.3 2,-0.5 -0.877 22.1-149.7-104.7 143.6 10.0 13.6 13.3 79 79 A V E +DE 58 88C 0 9,-2.7 8,-3.1 -2,-0.4 9,-1.4 -0.975 22.1 168.6-117.7 126.1 10.9 12.1 9.9 80 80 A F E -DE 57 86C 0 -23,-2.0 -23,-2.2 -2,-0.5 6,-0.2 -0.872 21.2-131.5-131.2 164.5 8.1 11.4 7.4 81 81 A N E > -D 56 0C 2 4,-1.8 3,-1.8 -2,-0.3 -25,-0.2 -0.419 38.9 -85.0-108.8-172.1 8.0 10.4 3.7 82 82 A E T 3 S+ 0 0 74 -27,-0.8 -26,-0.1 1,-0.3 -28,-0.1 0.741 126.7 56.0 -63.4 -25.4 6.2 11.5 0.6 83 83 A N T 3 S- 0 0 109 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.218 118.9-110.5 -91.7 13.0 3.2 9.3 1.5 84 84 A N < + 0 0 62 -3,-1.8 2,-0.4 1,-0.2 -2,-0.1 0.896 69.8 148.0 57.7 42.0 2.9 11.0 4.8 85 85 A Q - 0 0 85 -32,-0.1 -4,-1.8 -65,-0.0 2,-0.5 -0.880 52.3-116.2-106.7 140.2 4.1 7.9 6.6 86 86 A L E +E 80 0C 48 -2,-0.4 -6,-0.2 -6,-0.2 3,-0.1 -0.644 30.1 178.7 -78.3 124.3 6.1 8.2 9.9 87 87 A A E - 0 0 16 -8,-3.1 -36,-0.3 -2,-0.5 2,-0.3 0.837 56.6 -66.9 -91.4 -40.5 9.6 6.8 9.5 88 88 A G E -E 79 0C 9 -9,-1.4 -9,-2.7 -38,-0.1 2,-0.5 -0.979 39.8 -92.1 170.8 179.6 10.8 7.6 13.0 89 89 A V E +E 78 0C 4 -2,-0.3 14,-2.8 14,-0.3 2,-0.3 -0.989 43.5 177.4-122.1 125.3 11.7 10.2 15.6 90 90 A I E -EF 77 102C 0 -13,-2.3 -13,-2.8 -2,-0.5 2,-0.3 -0.810 9.5-162.5-127.2 167.0 15.3 11.2 15.9 91 91 A T E -EF 76 101C 2 10,-2.7 10,-2.2 -2,-0.3 -15,-0.2 -0.996 30.2-141.0-151.6 153.4 17.4 13.7 17.9 92 92 A H S > S+ 0 0 50 -17,-1.9 3,-2.1 -2,-0.3 2,-0.2 0.645 75.7 109.6 -83.2 -18.3 20.8 15.5 18.1 93 93 A T T 3 S+ 0 0 61 1,-0.3 -86,-0.2 -18,-0.2 8,-0.1 -0.403 88.0 10.5 -63.3 125.7 20.8 14.8 21.8 94 94 A G T 3 S+ 0 0 82 1,-0.3 2,-0.4 -2,-0.2 -1,-0.3 0.502 108.5 107.2 84.5 2.9 23.5 12.3 22.7 95 95 A A S < S- 0 0 23 -3,-2.1 -1,-0.3 4,-0.2 2,-0.2 -0.885 74.7-110.2-114.0 145.7 25.0 12.5 19.2 96 96 A S S > S- 0 0 90 -2,-0.4 3,-2.1 -3,-0.1 -3,-0.0 -0.480 74.8 -29.8 -75.9 144.7 28.2 14.2 18.3 97 97 A G T 3 S- 0 0 65 1,-0.3 -2,-0.1 -2,-0.2 0, 0.0 -0.221 125.8 -22.6 53.8-130.4 28.2 17.4 16.3 98 98 A N T 3 S+ 0 0 145 2,-0.0 -1,-0.3 0, 0.0 -2,-0.1 0.127 105.8 120.3 -99.1 17.9 25.2 17.6 13.9 99 99 A N < - 0 0 80 -3,-2.1 2,-0.3 -7,-0.1 -4,-0.2 -0.249 53.3-134.3 -76.1 171.2 24.6 13.9 13.8 100 100 A F - 0 0 18 -6,-0.1 2,-0.3 -10,-0.0 -8,-0.2 -0.912 14.8-169.1-127.4 153.2 21.4 12.1 14.9 101 101 A V E -F 91 0C 56 -10,-2.2 -10,-2.7 -2,-0.3 2,-0.2 -0.916 36.3-100.6-132.6 157.0 20.5 9.1 16.9 102 102 A E E -F 90 0C 97 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.3 -0.494 29.8-120.1 -80.1 151.2 17.1 7.6 17.1 103 103 A b 0 0 13 -14,-2.8 -14,-0.3 -2,-0.2 -97,-0.2 -0.714 360.0 360.0 -86.3 142.4 14.8 8.2 20.0 104 104 A T 0 0 137 -99,-1.6 -100,-0.1 -2,-0.3 -98,-0.1 0.062 360.0 360.0-109.9 360.0 13.8 5.0 21.8