==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 19-JAN-01 1HYK . COMPND 2 MOLECULE: AGOUTI RELATED PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR K.A.BOLIN,D.J.ANDERSON,J.A.TRULSON,D.A.THOMPSON,J.WILKEN, . 46 1 5 5 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3736.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 37.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 15.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A a 0 0 106 0, 0.0 14,-0.2 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0-167.4 -11.7 -3.8 3.4 2 2 A V B -a 15 0A 10 12,-1.6 14,-1.3 1,-0.2 6,-0.1 -0.350 360.0 -96.1 -95.0 178.0 -9.7 -2.7 0.3 3 3 A R - 0 0 181 4,-0.2 14,-0.4 12,-0.1 13,-0.4 0.085 50.5 -80.0 -79.7-163.6 -8.5 -4.7 -2.6 4 4 A L S S- 0 0 79 1,-0.2 13,-0.1 12,-0.1 -2,-0.1 0.880 119.0 -1.8 -68.8 -39.7 -5.0 -6.2 -3.2 5 5 A H S S+ 0 0 133 29,-0.1 2,-0.3 2,-0.1 -1,-0.2 -0.477 98.7 112.0-155.8 77.7 -3.5 -2.9 -4.3 6 6 A E - 0 0 84 -3,-0.3 27,-2.2 -2,-0.1 2,-0.1 -0.858 68.4 -71.3-140.5 174.3 -5.9 0.1 -4.5 7 7 A S B -B 32 0B 57 25,-0.3 25,-0.3 -2,-0.3 -4,-0.2 -0.423 28.2-168.6 -70.9 143.0 -6.6 3.5 -2.8 8 8 A b - 0 0 2 23,-2.3 5,-0.4 -2,-0.1 4,-0.4 0.408 20.9-155.6-109.5 -2.6 -8.0 3.4 0.7 9 9 A L S S+ 0 0 136 22,-0.7 3,-0.2 1,-0.2 23,-0.0 0.774 78.9 29.4 22.3 99.5 -8.8 7.1 0.8 10 10 A G S S- 0 0 42 1,-0.1 -1,-0.2 2,-0.1 -3,-0.0 0.059 100.6-116.6 119.5 -24.7 -8.9 8.0 4.5 11 11 A Q S S+ 0 0 136 20,-0.2 -1,-0.1 2,-0.1 -2,-0.1 0.496 97.4 99.5 69.9 2.5 -6.4 5.4 5.8 12 12 A Q + 0 0 121 -4,-0.4 -1,-0.1 -3,-0.2 -3,-0.1 0.549 61.5 80.5 -93.5 -10.3 -9.3 4.0 7.8 13 13 A V S S- 0 0 39 -5,-0.4 -2,-0.1 -12,-0.1 -1,-0.1 -0.770 73.2-157.6-100.9 90.6 -9.9 1.2 5.3 14 14 A P - 0 0 83 0, 0.0 -12,-1.6 0, 0.0 7,-0.1 -0.240 31.0 -88.7 -64.9 153.7 -7.3 -1.5 6.0 15 15 A c B -a 2 0A 12 5,-0.4 5,-0.2 -14,-0.2 -12,-0.1 -0.406 23.2-140.3 -66.1 136.0 -6.3 -4.0 3.2 16 16 A a S S+ 0 0 77 -14,-1.3 -1,-0.1 -13,-0.4 -12,-0.1 0.550 79.7 95.0 -72.0 -7.1 -8.4 -7.1 3.0 17 17 A D S > S- 0 0 50 -14,-0.4 3,-2.3 1,-0.1 -2,-0.1 -0.730 89.4-103.2 -90.9 133.3 -5.2 -9.0 2.3 18 18 A P T 3 S+ 0 0 77 0, 0.0 26,-0.5 0, 0.0 3,-0.1 -0.221 105.9 5.7 -53.7 134.9 -3.4 -10.7 5.3 19 19 A d T 3 S+ 0 0 61 1,-0.2 2,-0.4 24,-0.1 24,-0.2 0.638 105.0 128.8 64.0 13.7 -0.3 -8.8 6.4 20 20 A A < + 0 0 12 -3,-2.3 -5,-0.4 -5,-0.2 2,-0.3 -0.863 33.2 176.5-105.1 134.3 -1.4 -6.1 4.0 21 21 A T E -C 34 0B 74 13,-2.4 13,-1.3 -2,-0.4 2,-0.3 -0.988 33.2-107.0-137.7 146.4 -1.7 -2.4 5.0 22 22 A b E -C 33 0B 25 -2,-0.3 2,-0.3 11,-0.3 11,-0.3 -0.524 39.5-176.7 -73.1 131.5 -2.5 0.8 3.2 23 23 A Y E -C 32 0B 68 9,-3.2 9,-2.4 -2,-0.3 2,-0.5 -0.962 22.2-128.5-131.4 148.0 0.5 3.1 2.7 24 24 A e E -C 31 0B 39 -2,-0.3 7,-0.3 7,-0.3 9,-0.0 -0.837 2.1-154.8 -99.7 128.1 0.9 6.6 1.2 25 25 A R S S+ 0 0 149 5,-2.2 2,-0.2 -2,-0.5 -1,-0.1 0.602 84.7 5.7 -73.2 -10.5 3.5 7.2 -1.5 26 26 A F S S- 0 0 126 1,-0.1 -2,-0.1 4,-0.0 3,-0.1 -0.604 112.1 -52.0-145.4-154.8 3.5 10.9 -0.4 27 27 A F S S- 0 0 148 -2,-0.2 -3,-0.1 1,-0.2 -1,-0.1 0.990 115.2 -31.4 -55.6 -71.0 2.0 13.2 2.2 28 28 A N S S+ 0 0 119 -3,-0.1 -1,-0.2 -19,-0.0 -4,-0.0 -0.489 120.8 67.6-155.2 75.9 -1.7 12.2 1.8 29 29 A A S S+ 0 0 57 -3,-0.1 2,-1.8 -2,-0.1 -20,-0.2 0.296 84.3 56.3-153.1 -61.6 -2.6 11.2 -1.7 30 30 A F + 0 0 121 -23,-0.1 -5,-2.2 2,-0.0 2,-0.9 -0.373 69.0 150.6 -84.3 59.0 -1.1 8.0 -3.0 31 31 A e E + C 0 24B 7 -2,-1.8 -23,-2.3 -7,-0.3 -22,-0.7 -0.811 15.6 141.7 -97.6 103.1 -2.5 5.9 -0.1 32 32 A Y E -BC 7 23B 62 -9,-2.4 -9,-3.2 -2,-0.9 -25,-0.3 -0.913 55.6 -71.9-137.7 163.6 -3.1 2.3 -1.3 33 33 A c E - C 0 22B 3 -27,-2.2 2,-0.4 -11,-0.3 -11,-0.3 -0.162 45.5-163.2 -54.0 146.0 -2.8 -1.2 0.0 34 34 A R E - C 0 21B 96 -13,-1.3 -13,-2.4 -17,-0.1 -19,-0.1 -0.992 22.2-155.7-139.1 127.9 0.7 -2.6 0.4 35 35 A K - 0 0 66 -2,-0.4 8,-0.4 -15,-0.2 3,-0.4 0.241 55.5-106.9 -84.2 14.1 1.8 -6.2 0.8 36 36 A L - 0 0 64 -15,-0.3 2,-2.3 1,-0.2 7,-0.2 0.846 19.0-120.1 60.6 111.2 5.0 -5.0 2.5 37 37 A G + 0 0 70 1,-0.1 2,-1.4 5,-0.1 -1,-0.2 -0.269 57.7 148.9 -77.2 54.5 8.1 -5.4 0.3 38 38 A T + 0 0 49 -2,-2.3 3,-0.4 -3,-0.4 -1,-0.1 -0.613 14.0 169.4 -91.3 77.1 9.7 -7.7 2.8 39 39 A A S S+ 0 0 91 -2,-1.4 -1,-0.2 1,-0.2 -2,-0.0 0.682 78.9 55.0 -61.1 -17.1 11.8 -9.8 0.4 40 40 A M S S+ 0 0 177 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.1 0.852 132.9 2.0 -84.0 -38.3 13.5 -11.2 3.5 41 41 A N S S+ 0 0 138 -3,-0.4 -2,-0.2 0, 0.0 -1,-0.2 -0.454 80.8 177.7-150.3 69.4 10.3 -12.3 5.3 42 42 A P - 0 0 55 0, 0.0 3,-0.2 0, 0.0 -6,-0.1 -0.482 14.2-152.6 -77.9 145.8 7.2 -11.7 3.1 43 43 A d S S- 0 0 62 -8,-0.4 2,-1.5 -7,-0.2 -24,-0.1 0.675 70.9 -3.0 -82.3-118.3 3.8 -12.7 4.3 44 44 A S S S+ 0 0 53 -26,-0.5 -1,-0.2 1,-0.1 -27,-0.0 -0.628 92.0 115.4 -82.1 88.2 1.0 -13.5 1.9 45 45 A R 0 0 116 -2,-1.5 -1,-0.1 -3,-0.2 -10,-0.0 -0.376 360.0 360.0-154.9 66.3 2.6 -12.8 -1.4 46 46 A T 0 0 203 0, 0.0 -3,-0.0 0, 0.0 -2,-0.0 -0.280 360.0 360.0-121.0 360.0 3.0 -16.0 -3.5