==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SUGAR BINDING PROTEIN 23-JAN-01 1HZ3 . COMPND 2 MOLECULE: A-BETA AMYLOID; . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.ZHANG,K.IWATA,M.J.LACHENMANN,J.W.PENG,S.LI,E.R.STIMSON, . 26 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2265.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Y 0 0 175 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 119.7 -0.1 -9.3 2.3 2 2 A E - 0 0 157 1,-0.1 2,-2.2 3,-0.0 0, 0.0 0.612 360.0-154.6 -84.3 -14.8 -1.5 -9.6 -1.3 3 3 A V - 0 0 23 1,-0.2 2,-1.0 2,-0.0 6,-0.2 -0.262 6.6-154.8 69.4 -52.0 -1.3 -5.7 -2.3 4 4 A H - 0 0 137 -2,-2.2 -1,-0.2 3,-0.1 -2,-0.0 -0.078 31.7-140.0 71.5 -34.2 -4.2 -6.0 -5.0 5 5 A H + 0 0 73 -2,-1.0 9,-0.1 1,-0.1 -2,-0.0 0.397 67.3 50.9 64.4 162.5 -2.7 -2.9 -6.9 6 6 A Q S S+ 0 0 164 1,-0.1 -2,-0.1 3,-0.1 -1,-0.1 0.731 96.0 72.0 44.0 42.2 -4.2 0.3 -8.6 7 7 A K S S- 0 0 176 2,-0.0 -1,-0.1 7,-0.0 -3,-0.1 0.518 109.6 -36.3-138.1 -64.7 -6.6 1.4 -5.8 8 8 A L + 0 0 75 17,-0.0 2,-0.8 18,-0.0 11,-0.1 0.480 64.9 147.9-152.6 0.9 -5.0 3.0 -2.5 9 9 A V + 0 0 8 -6,-0.2 9,-0.5 1,-0.2 5,-0.3 -0.302 5.5 152.8 -68.3 99.1 -1.6 1.6 -1.2 10 10 A F S S+ 0 0 48 -2,-0.8 13,-0.5 7,-0.2 -1,-0.2 0.480 74.7 48.1 -90.0 -14.2 0.3 4.5 0.5 11 11 A F S S+ 0 0 88 6,-0.1 -1,-0.1 12,-0.1 -2,-0.1 0.371 120.7 5.4-112.3 -1.7 2.3 2.2 3.0 12 12 A A S >S- 0 0 28 -9,-0.1 5,-0.5 -3,-0.0 3,-0.1 0.299 110.1 -17.9-149.3 -90.3 3.7 -0.7 0.7 13 13 A E T 5S+ 0 0 107 3,-0.2 -3,-0.1 2,-0.1 -4,-0.0 0.364 88.9 91.7-130.1 9.8 3.8 -1.6 -3.1 14 14 A D T 5S- 0 0 24 -5,-0.3 -1,-0.1 1,-0.1 -8,-0.0 0.030 131.7 -15.9 -86.5 31.9 1.3 0.3 -5.5 15 15 A V T 5S- 0 0 90 -3,-0.1 -2,-0.1 4,-0.0 -1,-0.1 0.011 114.4 -79.0 158.2 -27.9 4.3 2.9 -5.8 16 16 A G T 5S- 0 0 50 -7,-0.3 -3,-0.2 3,-0.0 -6,-0.1 0.816 92.2 -41.2 101.2 66.3 6.7 1.9 -2.8 17 17 A S S