==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 08-AUG-06 2HZD . COMPND 2 MOLECULE: TRANSCRIPTIONAL ENHANCER FACTOR TEF-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.ANBANANDAM,S.VEERARAGHAVAN . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7759.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 54.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 42.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 231 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 79.6 25.4 6.2 3.9 2 2 A D > - 0 0 99 1,-0.1 3,-2.0 2,-0.1 0, 0.0 -0.136 360.0-107.0 -60.9 160.1 24.0 7.7 7.0 3 3 A N G > S+ 0 0 111 1,-0.3 3,-1.5 2,-0.1 5,-0.3 0.735 116.1 74.0 -61.2 -22.3 23.3 5.5 10.0 4 4 A D G 3 S+ 0 0 117 1,-0.3 4,-0.4 2,-0.1 3,-0.4 0.726 88.4 61.0 -64.0 -21.3 19.6 5.8 9.2 5 5 A A G < S+ 0 0 74 -3,-2.0 -1,-0.3 1,-0.2 -2,-0.1 0.061 74.9 97.7 -93.8 24.1 20.2 3.5 6.3 6 6 A E S < S- 0 0 151 -3,-1.5 -1,-0.2 0, 0.0 -2,-0.1 0.130 102.6-108.5 -97.1 19.4 21.3 0.7 8.7 7 7 A G + 0 0 59 -3,-0.4 -2,-0.1 1,-0.1 -3,-0.1 0.870 60.3 161.1 56.5 40.5 17.9 -0.9 8.6 8 8 A V + 0 0 99 -4,-0.4 2,-0.1 -5,-0.3 -1,-0.1 0.768 47.3 94.5 -60.9 -25.5 17.2 0.2 12.1 9 9 A W S S- 0 0 172 -5,-0.2 5,-0.0 1,-0.1 0, 0.0 -0.432 91.5 -99.8 -70.5 141.0 13.5 -0.4 11.4 10 10 A S >> - 0 0 54 1,-0.1 4,-1.1 -2,-0.1 3,-0.8 -0.283 21.2-133.8 -60.4 143.1 12.1 -3.7 12.3 11 11 A P H 3> S+ 0 0 95 0, 0.0 4,-1.4 0, 0.0 -1,-0.1 0.716 103.0 66.9 -71.2 -21.0 11.7 -6.2 9.4 12 12 A D H 3> S+ 0 0 93 2,-0.2 4,-1.6 1,-0.2 45,-0.1 0.757 99.7 51.0 -70.9 -24.6 8.2 -7.1 10.5 13 13 A I H <> S+ 0 0 15 -3,-0.8 4,-1.0 2,-0.2 -1,-0.2 0.920 111.4 44.3 -77.7 -46.5 7.1 -3.6 9.6 14 14 A E H X S+ 0 0 142 -4,-1.1 4,-1.1 1,-0.2 -2,-0.2 0.758 113.8 54.2 -68.4 -24.3 8.6 -3.6 6.1 15 15 A Q H X S+ 0 0 120 -4,-1.4 4,-1.4 2,-0.2 3,-0.3 0.895 104.3 51.6 -75.8 -41.9 7.1 -7.1 5.7 16 16 A S H X S+ 0 0 2 -4,-1.6 4,-1.2 1,-0.2 -2,-0.2 0.737 104.4 61.5 -66.0 -22.3 3.6 -6.0 6.7 17 17 A F H X S+ 0 0 9 -4,-1.0 4,-2.0 2,-0.2 -1,-0.2 0.901 103.1 46.8 -71.1 -42.2 4.0 -3.3 4.0 18 18 A Q H X S+ 0 0 121 -4,-1.1 4,-2.9 -3,-0.3 5,-0.2 0.817 108.0 58.0 -68.8 -30.4 4.4 -5.8 1.2 19 19 A E H X S+ 0 0 64 -4,-1.4 4,-1.2 2,-0.2 -1,-0.2 0.840 111.5 40.9 -68.3 -32.7 1.5 -7.7 2.5 20 20 A A H X S+ 0 0 0 -4,-1.2 4,-1.6 2,-0.2 -2,-0.2 0.795 119.9 44.4 -83.8 -30.5 -0.7 -4.6 2.1 21 21 A L H < S+ 0 0 7 -4,-2.0 -2,-0.2 2,-0.2 -3,-0.2 0.776 115.3 48.5 -82.3 -28.7 0.9 -3.7 -1.2 22 22 A S H < S+ 0 0 82 -4,-2.9 -2,-0.2 -5,-0.2 -3,-0.2 0.837 117.2 41.5 -78.3 -34.7 0.7 -7.3 -2.4 23 23 A I H < S+ 0 0 70 -4,-1.2 -2,-0.2 1,-0.3 -3,-0.2 0.842 122.7 41.2 -79.2 -36.5 -2.9 -7.6 -1.3 24 24 A Y S < S+ 0 0 61 -4,-1.6 -1,-0.3 -5,-0.1 4,-0.1 -0.775 80.9 173.1-116.2 84.8 -3.8 -4.2 -2.6 25 25 A P - 0 0 42 0, 0.0 4,-0.2 0, 0.0 -3,-0.1 -0.265 49.6 -98.0 -84.6 174.2 -2.0 -3.6 -6.0 26 26 A P S S+ 0 0 45 0, 0.0 2,-0.3 0, 0.0 42,-0.0 0.605 106.5 18.5 -68.2 -11.0 -2.4 -0.7 -8.4 27 27 A C S S+ 0 0 82 1,-0.0 3,-0.0 3,-0.0 45,-0.0 -0.912 77.6 86.1-149.7 174.7 -4.8 -2.8 -10.4 28 28 A G S S+ 0 0 68 -2,-0.3 2,-0.3 -4,-0.1 -1,-0.0 -0.174 97.2 25.6 121.7 -40.1 -7.0 -5.9 -10.2 29 29 A R + 0 0 187 -4,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.932 50.9 175.7-159.3 131.6 -10.2 -4.4 -8.8 30 30 A R + 0 0 200 -2,-0.3 2,-0.3 -3,-0.0 -2,-0.0 -0.712 35.4 118.0-141.2 86.9 -11.8 -0.9 -8.9 31 31 A K + 0 0 184 -2,-0.3 2,-0.1 2,-0.0 -2,-0.0 -0.996 25.4 173.7-150.4 149.3 -15.2 -0.6 -7.3 32 32 A I - 0 0 100 -2,-0.3 2,-2.1 8,-0.0 3,-0.2 -0.535 11.2-166.4-160.0 84.6 -16.8 1.2 -4.4 33 33 A I >> + 0 0 114 1,-0.2 4,-1.6 -2,-0.1 3,-0.8 -0.494 25.7 156.3 -75.6 77.9 -20.6 1.0 -4.0 34 34 A L H 3> + 0 0 74 -2,-2.1 4,-1.3 1,-0.2 -1,-0.2 0.750 62.6 74.3 -74.7 -24.6 -21.0 3.8 -1.5 35 35 A S H 34 S+ 0 0 128 -3,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.741 109.3 31.8 -59.8 -22.6 -24.6 4.3 -2.5 36 36 A D H <4 S+ 0 0 143 -3,-0.8 -2,-0.2 3,-0.0 -1,-0.1 0.877 131.7 27.4 -98.0 -65.9 -25.3 1.1 -0.5 37 37 A E H < S- 0 0 122 -4,-1.6 -3,-0.2 1,-0.1 -2,-0.1 0.865 79.7-162.7 -67.0 -37.1 -22.8 0.9 2.4 38 38 A G < + 0 0 39 -4,-1.3 2,-0.3 -5,-0.4 -4,-0.1 0.688 64.0 92.1 59.8 18.2 -22.5 4.7 2.5 39 39 A K + 0 0 149 2,-0.1 2,-0.2 1,-0.0 -1,-0.1 -0.729 38.9 126.9-146.0 90.8 -19.4 4.1 4.5 40 40 A M - 0 0 70 -2,-0.3 3,-0.1 -8,-0.1 -6,-0.1 -0.671 31.6-174.1-149.0 86.9 -16.1 4.0 2.6 41 41 A Y - 0 0 180 -2,-0.2 5,-0.1 1,-0.2 -2,-0.1 0.052 51.2 -41.8 -69.4-175.3 -13.4 6.3 3.7 42 42 A G > - 0 0 40 1,-0.2 3,-2.1 2,-0.1 4,-0.3 -0.185 52.1-125.4 -52.5 139.0 -10.0 6.8 1.9 43 43 A R T >> S+ 0 0 121 1,-0.3 3,-2.2 2,-0.2 4,-1.2 0.773 105.6 77.3 -57.2 -26.5 -8.5 3.5 0.6 44 44 A N H 3> S+ 0 0 51 1,-0.3 4,-1.6 2,-0.2 -1,-0.3 0.788 87.6 59.1 -54.8 -27.7 -5.4 4.5 2.6 45 45 A E H <> S+ 0 0 84 -3,-2.1 4,-1.2 1,-0.2 -1,-0.3 0.717 99.6 57.7 -74.0 -21.5 -7.3 3.4 5.7 46 46 A L H <> S+ 0 0 67 -3,-2.2 4,-0.8 -4,-0.3 -2,-0.2 0.833 108.4 43.9 -77.5 -34.2 -7.6 -0.1 4.1 47 47 A I H X S+ 0 0 2 -4,-1.2 4,-1.5 2,-0.2 -2,-0.2 0.824 115.4 48.5 -79.1 -32.2 -3.8 -0.5 3.7 48 48 A A H X S+ 0 0 16 -4,-1.6 4,-1.5 -5,-0.2 -2,-0.2 0.790 105.5 58.6 -76.6 -28.3 -3.2 0.8 7.2 49 49 A R H X S+ 0 0 139 -4,-1.2 4,-1.0 2,-0.2 -1,-0.2 0.812 104.3 53.1 -69.6 -29.4 -5.8 -1.4 8.6 50 50 A Y H >X S+ 0 0 43 -4,-0.8 4,-1.1 2,-0.2 3,-0.8 0.964 110.2 43.7 -68.8 -54.2 -3.9 -4.4 7.3 51 51 A I H 3X S+ 0 0 2 -4,-1.5 4,-0.8 1,-0.3 6,-0.5 0.798 111.2 57.5 -61.6 -28.4 -0.6 -3.5 8.9 52 52 A K H 3X S+ 0 0 107 -4,-1.5 4,-1.0 1,-0.2 -1,-0.3 0.784 107.2 47.3 -72.5 -27.8 -2.6 -2.7 12.1 53 53 A L H << S+ 0 0 147 -4,-1.0 -1,-0.2 -3,-0.8 -2,-0.2 0.636 94.8 79.0 -86.6 -17.1 -3.9 -6.2 12.1 54 54 A R H < S- 0 0 93 -4,-1.1 -2,-0.2 1,-0.1 -1,-0.1 0.963 130.4 -39.2 -54.4 -59.1 -0.4 -7.7 11.5 55 55 A T H < S- 0 0 84 -4,-0.8 -2,-0.2 3,-0.2 -1,-0.1 0.064 83.8 -90.1-162.1 30.6 0.7 -7.4 15.1 56 56 A G S < S+ 0 0 56 -4,-1.0 -4,-0.1 -5,-0.2 -3,-0.1 0.650 86.3 139.3 63.8 13.7 -0.7 -4.1 16.3 57 57 A K - 0 0 110 -6,-0.5 -1,-0.1 1,-0.2 -3,-0.1 0.019 61.0 -45.1 -75.7-171.5 2.6 -2.5 15.1 58 58 A T - 0 0 55 1,-0.1 -3,-0.2 -3,-0.1 -1,-0.2 0.108 46.9-156.6 -47.8 170.2 2.9 0.9 13.3 59 59 A R - 0 0 127 -3,-0.1 -11,-0.1 -7,-0.1 -1,-0.1 -0.378 10.0-171.2-155.4 66.8 0.5 1.7 10.5 60 60 A T - 0 0 49 1,-0.1 -9,-0.1 -13,-0.1 4,-0.0 -0.326 8.3-179.4 -62.4 140.7 2.0 4.3 8.1 61 61 A R S > S+ 0 0 158 2,-0.1 4,-1.0 3,-0.1 -1,-0.1 0.729 79.8 48.7-110.2 -38.8 -0.4 5.7 5.6 62 62 A K H > S+ 0 0 151 1,-0.2 4,-1.4 2,-0.2 5,-0.1 0.804 113.6 49.0 -72.7 -30.2 1.7 8.1 3.6 63 63 A Q H > S+ 0 0 110 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.801 110.7 49.9 -78.4 -30.7 4.4 5.5 3.2 64 64 A V H > S+ 0 0 0 2,-0.2 4,-0.8 1,-0.2 -2,-0.2 0.702 111.6 49.2 -80.1 -20.3 1.9 2.8 2.1 65 65 A S H X S+ 0 0 31 -4,-1.0 4,-1.2 2,-0.2 -2,-0.2 0.819 109.3 51.2 -85.5 -34.1 0.5 5.2 -0.5 66 66 A S H X S+ 0 0 73 -4,-1.4 4,-1.1 1,-0.2 -2,-0.2 0.823 107.0 55.0 -70.2 -33.1 3.9 6.2 -1.8 67 67 A H H X S+ 0 0 83 -4,-1.2 4,-0.9 1,-0.2 -1,-0.2 0.853 106.5 50.2 -69.2 -35.9 4.7 2.5 -2.2 68 68 A I H X S+ 0 0 30 -4,-0.8 4,-0.8 1,-0.2 -1,-0.2 0.803 107.1 55.0 -72.3 -29.4 1.6 1.9 -4.4 69 69 A Q H X S+ 0 0 140 -4,-1.2 4,-0.7 1,-0.2 -1,-0.2 0.782 102.0 57.9 -73.4 -27.6 2.6 4.8 -6.6 70 70 A V H X S+ 0 0 70 -4,-1.1 4,-0.7 1,-0.2 3,-0.3 0.799 99.9 57.6 -72.0 -29.3 6.0 3.3 -7.2 71 71 A L H X S+ 0 0 67 -4,-0.9 4,-0.8 1,-0.2 3,-0.3 0.806 100.1 57.9 -70.5 -29.7 4.3 0.2 -8.6 72 72 A A H X S+ 0 0 43 -4,-0.8 4,-1.0 1,-0.2 -1,-0.2 0.785 99.1 59.4 -70.3 -27.6 2.5 2.3 -11.2 73 73 A R H < S+ 0 0 151 -4,-0.7 4,-0.4 -3,-0.3 -1,-0.2 0.790 98.7 58.3 -70.8 -28.4 5.9 3.5 -12.4 74 74 A R H < S+ 0 0 170 -4,-0.7 3,-0.4 -3,-0.3 -1,-0.2 0.810 105.5 49.4 -70.6 -30.5 6.9 -0.0 -13.2 75 75 A K H >< S+ 0 0 101 -4,-0.8 3,-1.2 1,-0.2 -1,-0.2 0.756 99.8 65.3 -79.0 -26.5 3.9 -0.4 -15.5 76 76 A S T 3< S+ 0 0 95 -4,-1.0 3,-0.3 1,-0.3 -1,-0.2 0.661 90.1 67.8 -69.8 -16.0 4.7 2.9 -17.3 77 77 A R T 3 S+ 0 0 195 -3,-0.4 -1,-0.3 -4,-0.4 -2,-0.1 0.144 70.9 96.7 -90.1 19.6 7.9 1.2 -18.6 78 78 A D < + 0 0 116 -3,-1.2 2,-1.2 2,-0.1 -1,-0.2 0.045 45.4 148.5 -95.7 25.4 5.9 -1.1 -20.8 79 79 A L - 0 0 146 -3,-0.3 -3,-0.0 1,-0.1 -2,-0.0 -0.457 47.3-137.2 -64.6 95.7 6.4 1.1 -23.8 80 80 A V - 0 0 91 -2,-1.2 -1,-0.1 1,-0.2 -2,-0.1 -0.393 12.3-160.9 -58.7 109.4 6.4 -1.5 -26.6 81 81 A P 0 0 109 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.631 360.0 360.0 -68.1 -12.7 9.3 -0.5 -28.9 82 82 A R 0 0 261 0, 0.0 -2,-0.0 0, 0.0 -3,-0.0 -0.364 360.0 360.0 60.4 360.0 7.7 -2.6 -31.6