==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 14-AUG-06 2I1D . COMPND 2 MOLECULE: 13-MER FROM PROPHENIN-1 CONTAINING WWW; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.J.SCHIBLI,L.T.NGUYEN . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1757.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 182 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-144.0 -11.4 1.9 3.8 2 2 A R + 0 0 203 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.888 360.0 134.2-170.9 138.0 -9.4 0.4 0.9 3 3 A R S S+ 0 0 216 1,-0.4 -1,-0.1 -2,-0.3 0, 0.0 0.122 72.8 43.7-176.2 26.0 -7.6 1.7 -2.2 4 4 A F S S- 0 0 86 1,-0.2 -1,-0.4 5,-0.0 0, 0.0 -0.974 79.9-107.2-169.2 164.8 -4.4 -0.2 -2.1 5 5 A P - 0 0 62 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.998 47.4-121.5 -61.1 -74.0 -2.9 -3.6 -1.6 6 6 A W S S+ 0 0 180 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.146 104.2 60.1 153.5 -36.7 -1.2 -3.2 1.8 7 7 A W S >> S+ 0 0 109 1,-0.2 4,-1.4 3,-0.1 3,-0.5 0.494 92.3 73.1 -86.0 -14.1 2.4 -4.0 0.9 8 8 A W H 3> S+ 0 0 83 1,-0.2 4,-1.6 2,-0.2 2,-0.3 0.804 85.5 57.8 -77.6 -29.8 2.4 -1.1 -1.5 9 9 A P H 34 S+ 0 0 42 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.167 114.3 48.0 -89.0 36.5 2.5 1.8 1.1 10 10 A F H <4 S+ 0 0 152 -3,-0.5 -2,-0.2 -2,-0.3 -3,-0.1 0.423 107.4 45.6-142.1 -45.7 5.6 -0.0 2.1 11 11 A L H < S+ 0 0 112 -4,-1.4 -3,-0.1 2,-0.2 -4,-0.0 0.855 111.0 55.4 -77.1 -35.7 7.6 -0.7 -1.1 12 12 A R < 0 0 123 -4,-1.6 -1,-0.2 1,-0.2 -4,-0.1 0.927 360.0 360.0 -61.8 -46.0 7.1 2.8 -2.4 13 13 A R 0 0 207 -5,-0.2 -1,-0.2 0, 0.0 -2,-0.2 0.746 360.0 360.0 -66.5 360.0 8.5 4.3 0.8