==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 14-AUG-06 2I1F . COMPND 2 MOLECULE: 13-MER ANALOGUE OF PROPHENIN-1 CONTAINING WWW; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.J.SCHIBLI,L.T.NGUYEN . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1617.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 7 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 30.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V > 0 0 98 0, 0.0 4,-0.8 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 48.2 -6.2 -3.7 0.4 2 2 A R T 4 + 0 0 194 2,-0.2 4,-0.2 1,-0.1 0, 0.0 0.976 360.0 12.7 -62.9 -56.8 -8.5 -1.2 -1.3 3 3 A R T >4 S+ 0 0 132 2,-0.2 3,-2.1 1,-0.1 5,-0.2 0.855 120.7 67.0 -88.2 -41.0 -6.4 1.9 -0.4 4 4 A F G >>>S+ 0 0 97 1,-0.3 3,-2.0 2,-0.2 4,-2.0 0.764 86.6 76.1 -50.6 -25.8 -3.3 0.0 0.8 5 5 A A G 3<5S+ 0 0 57 -4,-0.8 -1,-0.3 1,-0.3 -2,-0.2 0.867 93.4 47.8 -55.6 -40.6 -3.0 -0.9 -2.8 6 6 A W G <45S- 0 0 180 -3,-2.1 -1,-0.3 -4,-0.2 -2,-0.2 0.230 138.5 -1.3 -87.4 15.2 -1.7 2.5 -3.8 7 7 A W T <>5S+ 0 0 71 -3,-2.0 4,-2.6 -4,-0.1 5,-0.3 0.341 108.9 79.0-167.9 -41.2 0.8 2.7 -0.9 8 8 A W H X5S+ 0 0 99 -4,-2.0 4,-1.4 1,-0.3 -3,-0.2 0.876 110.1 44.6 -52.1 -28.8 1.0 -0.3 1.4 9 9 A A H 44 S+ 0 0 143 -6,-0.3 3,-0.6 1,-0.2 -2,-0.2 0.864 108.0 42.4 -52.0 -43.4 4.7 1.8 -1.6 11 11 A L H 3< S+ 0 0 94 -4,-2.6 2,-0.4 1,-0.2 -1,-0.2 0.874 105.2 62.0 -75.3 -39.8 6.2 1.1 1.8 12 12 A R T 3< 0 0 161 -4,-1.4 -1,-0.2 -5,-0.3 -2,-0.2 0.029 360.0 360.0 -77.3 31.9 7.0 -2.6 1.2 13 13 A R < 0 0 246 -3,-0.6 -1,-0.2 -2,-0.4 -2,-0.1 0.999 360.0 360.0 -68.9 360.0 9.4 -1.5 -1.5