==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 14-AUG-06 2I1G . COMPND 2 MOLECULE: 13-MER ANALOGUE OF PROPHENIN-1 CONTAINING WWW; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.J.SCHIBLI,L.T.NGUYEN . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1681.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 121 0, 0.0 5,-0.1 0, 0.0 6,-0.0 0.000 360.0 360.0 360.0 40.9 2.0 -1.8 -4.6 2 2 A R - 0 0 182 3,-0.1 0, 0.0 1,-0.0 0, 0.0 0.946 360.0 -69.1 -65.1 -50.0 5.3 -2.3 -2.9 3 3 A R S S+ 0 0 222 2,-0.2 3,-0.1 3,-0.0 5,-0.0 0.180 105.4 92.6-174.9 -39.0 4.1 -5.3 -0.9 4 4 A Y S S- 0 0 66 1,-0.1 0, 0.0 2,-0.1 0, 0.0 0.231 90.4 -37.9 -59.4-169.5 1.6 -4.2 1.7 5 5 A P - 0 0 41 0, 0.0 -2,-0.2 0, 0.0 -3,-0.1 0.049 53.7-116.3 -48.8 163.1 -2.3 -4.1 1.1 6 6 A W S S+ 0 0 191 1,-0.2 4,-0.3 2,-0.2 -2,-0.1 0.857 121.9 42.7 -70.1 -33.5 -3.7 -3.1 -2.2 7 7 A W S > S+ 0 0 119 1,-0.2 4,-0.9 2,-0.1 3,-0.3 0.596 97.1 79.2 -83.8 -16.9 -5.3 -0.2 -0.4 8 8 A W H >> S+ 0 0 88 1,-0.2 4,-1.5 2,-0.2 3,-1.3 0.911 79.1 66.5 -61.0 -44.8 -2.2 0.5 1.6 9 9 A P H 34 S+ 0 0 13 0, 0.0 3,-0.5 0, 0.0 -1,-0.2 0.884 99.6 51.7 -43.4 -47.5 -0.3 2.3 -1.3 10 10 A Y H 34 S+ 0 0 186 -4,-0.3 -2,-0.2 -3,-0.3 -3,-0.1 0.861 105.8 58.3 -58.0 -35.2 -2.8 5.2 -1.1 11 11 A L H << S- 0 0 106 -3,-1.3 -1,-0.2 -4,-0.9 -3,-0.1 0.867 142.6 -30.3 -62.3 -41.3 -2.1 5.3 2.6 12 12 A R < 0 0 185 -4,-1.5 -2,-0.1 -3,-0.5 -4,-0.1 0.459 360.0 360.0-146.2 -47.8 1.6 5.9 2.0 13 13 A R 0 0 161 -5,-0.4 -3,-0.2 0, 0.0 -5,-0.1 0.964 360.0 360.0 -71.6 360.0 3.0 4.4 -1.2