==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 14-AUG-06 2I1H . COMPND 2 MOLECULE: 13-MER ANALOGUE OF PROPHENIN-1 CONTAINING WWW; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.J.SCHIBLI,L.T.NGUYEN . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1617.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 5 38.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 143 0, 0.0 5,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 128.0 -6.8 -3.6 4.3 2 2 A R - 0 0 183 3,-0.1 4,-0.0 1,-0.0 0, 0.0 0.994 360.0 -77.3 -66.6 -75.9 -8.9 -1.1 2.4 3 3 A R S S+ 0 0 166 0, 0.0 -1,-0.0 0, 0.0 3,-0.0 0.254 117.1 24.2-176.3 16.4 -7.4 -1.4 -1.1 4 4 A F S >> S+ 0 0 61 3,-0.0 2,-2.0 0, 0.0 3,-1.0 0.388 93.6 82.6-156.1 -37.6 -4.2 0.6 -1.1 5 5 A A T 34 S+ 0 0 59 1,-0.2 -3,-0.1 2,-0.2 0, 0.0 -0.190 92.7 56.4 -77.8 49.2 -2.7 0.9 2.4 6 6 A W T 34 S+ 0 0 123 -2,-2.0 4,-0.4 -5,-0.1 -1,-0.2 0.412 96.4 57.0-140.3 -39.7 -1.1 -2.6 2.1 7 7 A W T X> S+ 0 0 66 -3,-1.0 4,-3.2 1,-0.2 3,-0.5 0.656 88.9 78.3 -75.0 -18.8 0.9 -2.3 -1.0 8 8 A W T 3<>S+ 0 0 90 -4,-0.8 5,-2.5 1,-0.3 -1,-0.2 0.962 82.5 63.9 -53.8 -54.4 2.8 0.6 0.5 9 9 A P T 345S+ 0 0 78 0, 0.0 -1,-0.3 0, 0.0 -2,-0.2 0.844 125.9 14.4 -37.4 -44.9 4.9 -1.7 2.5 10 10 A F T <45S+ 0 0 122 -3,-0.5 -2,-0.2 -4,-0.4 -3,-0.1 0.900 135.9 39.2 -94.8 -62.7 6.2 -3.1 -0.7 11 11 A L T <5S+ 0 0 114 -4,-3.2 -3,-0.2 1,-0.2 -4,-0.0 0.973 120.8 37.3 -50.2 -80.1 5.2 -0.6 -3.4 12 12 A R T 5 0 0 173 -5,-0.2 -1,-0.2 1,-0.1 -4,-0.1 0.846 360.0 360.0 -46.1 -41.5 5.7 2.8 -1.8 13 13 A R < 0 0 239 -5,-2.5 -3,-0.2 -6,-0.3 -2,-0.2 0.936 360.0 360.0 -67.2 360.0 8.8 1.5 0.0