==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 30-JUN-09 3I35 . COMPND 2 MOLECULE: LIM AND SH3 DOMAIN PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.I.SIPONEN,A.K.ROOS,C.H.ARROWSMITH,H.BERGLUND,C.BOUNTRA,R.C . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3627.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 63.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 42.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 205 A K 0 0 97 0, 0.0 27,-1.8 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 -4.2 1.1 16.8 16.9 2 206 A R + 0 0 121 55,-0.2 55,-2.1 24,-0.1 2,-0.3 -0.755 360.0 177.0-104.3 138.7 0.4 19.6 14.4 3 207 A Y E -AB 25 56A 46 22,-2.7 22,-2.8 -2,-0.4 2,-0.4 -0.897 19.4-137.8-128.5 160.8 2.2 22.9 13.9 4 208 A R E -AB 24 55A 78 51,-2.8 51,-2.0 -2,-0.3 20,-0.2 -0.973 21.8-122.2-121.5 134.8 1.9 25.8 11.5 5 209 A A E - B 0 54A 2 18,-3.0 17,-2.7 -2,-0.4 49,-0.3 -0.496 21.6-174.2 -71.7 132.5 4.8 27.6 9.9 6 210 A V S S+ 0 0 38 47,-2.6 2,-0.3 -2,-0.2 48,-0.2 0.578 70.6 25.8-101.9 -14.5 4.8 31.3 10.6 7 211 A Y S S- 0 0 140 46,-1.1 -1,-0.2 13,-0.1 2,-0.1 -0.974 88.6 -97.5-138.5 155.3 7.7 32.2 8.3 8 212 A D - 0 0 100 -2,-0.3 2,-0.4 12,-0.2 12,-0.2 -0.422 40.1-167.5 -61.1 145.3 9.4 30.7 5.2 9 213 A Y B -F 19 0B 38 10,-2.8 10,-2.5 -2,-0.1 2,-0.6 -0.984 12.6-154.2-141.4 135.2 12.4 28.5 5.9 10 214 A S - 0 0 97 -2,-0.4 8,-0.2 8,-0.2 7,-0.1 -0.933 31.0-114.0-106.8 119.4 15.0 27.2 3.5 11 215 A A - 0 0 33 -2,-0.6 7,-0.1 1,-0.2 3,-0.1 -0.256 16.4-154.5 -52.5 132.4 16.8 24.0 4.5 12 216 A A S S- 0 0 80 5,-0.1 2,-0.2 1,-0.0 -1,-0.2 0.735 73.4 -6.1 -78.3 -22.1 20.5 24.6 5.2 13 217 A D S > S- 0 0 84 4,-0.1 3,-0.7 1,-0.0 -1,-0.0 -0.850 89.4 -72.6-161.2-174.8 21.3 21.0 4.4 14 218 A E T 3 S+ 0 0 117 -2,-0.2 -3,-0.0 1,-0.2 -1,-0.0 0.812 120.9 54.7 -71.0 -30.8 20.0 17.6 3.6 15 219 A D T 3 S+ 0 0 108 32,-0.1 33,-3.2 2,-0.1 -1,-0.2 0.683 98.7 73.3 -82.6 -16.0 18.7 16.8 7.1 16 220 A E B < S-c 48 0A 25 -3,-0.7 2,-0.3 31,-0.3 33,-0.2 -0.447 74.3-130.9 -86.9 169.8 16.5 19.9 7.4 17 221 A V - 0 0 0 31,-1.9 2,-0.3 -2,-0.1 -5,-0.1 -0.817 9.0-136.2-117.7 155.7 13.2 20.7 5.6 18 222 A S + 0 0 48 -2,-0.3 2,-0.3 -8,-0.2 -8,-0.2 -0.838 31.4 160.6-109.4 151.6 12.0 23.7 3.6 19 223 A F B -F 9 0B 7 -10,-2.5 -10,-2.8 -2,-0.3 2,-0.3 -0.979 29.6-121.6-162.8 166.1 8.6 25.2 4.0 20 224 A Q > - 0 0 111 -2,-0.3 3,-2.5 -12,-0.2 -15,-0.3 -0.868 44.1 -82.5-114.5 154.1 6.5 28.3 3.5 21 225 A D T 3 S+ 0 0 105 -2,-0.3 -15,-0.2 1,-0.3 3,-0.1 -0.228 119.2 27.6 -48.2 129.5 4.5 30.6 5.8 22 226 A G T 3 S+ 0 0 39 -17,-2.7 -1,-0.3 1,-0.3 -16,-0.1 0.231 87.3 135.2 95.8 -14.5 1.2 28.9 6.4 23 227 A D < - 0 0 17 -3,-2.5 -18,-3.0 -19,-0.1 2,-0.4 -0.380 52.7-127.6 -67.3 144.9 2.4 25.3 5.8 24 228 A T E -A 4 0A 24 -20,-0.2 17,-2.1 -3,-0.1 2,-0.5 -0.802 16.9-158.3 -94.4 134.7 1.2 22.6 8.2 25 229 A I E -AD 3 40A 0 -22,-2.8 -22,-2.7 -2,-0.4 3,-0.2 -0.974 16.6-171.9-114.5 126.2 3.8 20.4 9.8 26 230 A V E + D 0 39A 23 13,-2.6 13,-2.4 -2,-0.5 -24,-0.1 -0.686 55.9 30.1-121.0 166.7 2.6 17.1 11.1 27 231 A N E S- 0 0 116 -2,-0.2 2,-0.4 1,-0.2 -1,-0.2 0.882 79.0-175.7 55.7 41.3 3.9 14.2 13.2 28 232 A V E - 0 0 17 -27,-1.8 2,-0.4 -3,-0.2 10,-0.2 -0.583 14.2-177.4 -78.9 125.2 6.2 16.6 15.0 29 233 A Q E - D 0 37A 142 8,-2.6 8,-3.0 -2,-0.4 2,-0.4 -0.960 27.9-120.6-113.8 140.8 8.7 15.2 17.6 30 234 A Q E + D 0 36A 102 -2,-0.4 6,-0.3 6,-0.2 3,-0.1 -0.657 27.5 178.2 -81.4 132.7 10.9 17.5 19.6 31 235 A I E - 0 0 94 4,-2.4 2,-0.2 1,-0.4 5,-0.2 0.860 62.7 -36.1 -99.6 -53.4 14.7 17.0 19.2 32 236 A D E > S- D 0 35A 80 3,-1.8 3,-0.6 0, 0.0 -1,-0.4 -0.825 79.3 -64.3-152.4-167.1 16.0 19.7 21.4 33 237 A D T 3 S+ 0 0 160 -2,-0.2 3,-0.0 1,-0.2 18,-0.0 0.808 132.3 31.7 -55.7 -32.3 15.4 23.3 22.5 34 238 A G T 3 S+ 0 0 22 17,-0.1 17,-2.6 1,-0.1 18,-0.4 0.589 115.4 57.0 -95.0 -16.0 15.9 24.7 19.0 35 239 A W E < -DE 32 50A 65 -3,-0.6 -4,-2.4 15,-0.3 -3,-1.8 -0.944 45.4-177.5-141.8 138.0 14.7 21.9 16.8 36 240 A M E -DE 30 49A 9 13,-2.7 13,-3.0 -2,-0.4 2,-0.4 -0.872 20.2-137.5-124.1 165.7 11.8 19.6 15.9 37 241 A Y E +DE 29 48A 104 -8,-3.0 -8,-2.6 -2,-0.3 2,-0.3 -0.984 45.3 116.0-124.4 132.5 11.4 16.7 13.4 38 242 A G E - E 0 47A 1 9,-2.0 9,-2.3 -2,-0.4 2,-0.5 -0.962 56.4 -81.1-175.9-173.9 8.4 16.4 11.3 39 243 A T E -DE 26 46A 32 -13,-2.4 -13,-2.6 -2,-0.3 2,-0.9 -0.952 22.5-138.3-119.0 131.1 6.8 16.5 7.9 40 244 A V E >>> -DE 25 45A 0 5,-3.0 4,-2.2 -2,-0.5 5,-0.7 -0.721 23.5-153.5 -80.7 109.4 5.8 19.5 5.8 41 245 A E T 345S+ 0 0 104 -17,-2.1 -1,-0.2 -2,-0.9 3,-0.1 0.914 85.0 54.7 -56.5 -49.5 2.4 18.1 4.5 42 246 A R T 345S+ 0 0 135 -18,-0.4 -1,-0.2 1,-0.2 -17,-0.1 0.816 123.2 24.8 -60.6 -32.6 2.3 20.1 1.3 43 247 A T T <45S- 0 0 75 -3,-0.7 -1,-0.2 2,-0.1 -2,-0.2 0.566 96.7-125.9-104.4 -14.2 5.6 19.0 -0.0 44 248 A G T <5 + 0 0 52 -4,-2.2 2,-0.4 1,-0.2 -3,-0.2 0.616 56.6 152.4 74.8 12.1 6.1 15.6 1.8 45 249 A D E < - E 0 40A 59 -5,-0.7 -5,-3.0 -27,-0.2 2,-0.4 -0.648 24.0-169.9 -80.4 124.6 9.5 16.9 3.1 46 250 A T E + E 0 39A 61 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.963 33.8 78.9-118.6 138.6 10.5 15.2 6.4 47 251 A G E S- E 0 38A 2 -9,-2.3 -9,-2.0 -2,-0.4 -31,-0.3 -0.989 75.6 -21.7 161.8-162.8 13.4 16.4 8.5 48 252 A M E -cE 16 37A 55 -33,-3.2 -31,-1.9 -2,-0.3 -11,-0.2 -0.551 51.1-178.2 -83.3 140.0 14.6 18.9 11.0 49 253 A L E - E 0 36A 0 -13,-3.0 -13,-2.7 -2,-0.2 2,-0.3 -0.991 32.7-105.7-138.0 146.4 13.0 22.3 11.4 50 254 A P E > - E 0 35A 13 0, 0.0 3,-1.7 0, 0.0 -15,-0.3 -0.565 24.0-142.0 -76.4 128.9 13.7 25.3 13.6 51 255 A A G > S+ 0 0 19 -17,-2.6 3,-1.4 -2,-0.3 -16,-0.1 0.769 95.6 63.8 -64.2 -29.4 11.2 25.6 16.4 52 256 A N G 3 S+ 0 0 137 -18,-0.4 -1,-0.3 1,-0.3 -17,-0.1 0.641 95.0 62.5 -70.1 -13.9 11.0 29.4 16.3 53 257 A Y G < S+ 0 0 82 -3,-1.7 -47,-2.6 -47,-0.1 -46,-1.1 0.401 104.1 48.1 -91.5 0.8 9.6 29.2 12.8 54 258 A V E < -B 5 0A 15 -3,-1.4 2,-0.4 -49,-0.3 -49,-0.2 -0.883 62.7-151.2-137.8 165.9 6.4 27.4 13.7 55 259 A E E -B 4 0A 111 -51,-2.0 -51,-2.8 -2,-0.3 2,-0.1 -0.997 30.6-103.5-138.8 144.4 3.6 27.5 16.2 56 260 A A E B 3 0A 70 -2,-0.4 -53,-0.3 -53,-0.2 0, 0.0 -0.434 360.0 360.0 -67.1 138.7 1.4 24.8 17.7 57 261 A I 0 0 115 -55,-2.1 -55,-0.2 -2,-0.1 -1,-0.1 -0.602 360.0 360.0 -93.3 360.0 -2.1 24.7 16.2