==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 19-FEB-01 1I42 . COMPND 2 MOLECULE: P47; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR X.YUAN,A.SHAW,X.ZHANG,H.KONDO,J.LALLY,P.S.FREEMONT, . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5865.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 7.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 15.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 282 A K 0 0 246 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-179.3 -33.1 -3.8 31.6 2 283 A A - 0 0 70 1,-0.0 37,-0.0 44,-0.0 41,-0.0 -0.503 360.0-179.9 177.6 106.8 -33.4 -5.9 28.4 3 284 A S + 0 0 37 36,-0.2 -1,-0.0 -2,-0.1 40,-0.0 0.975 4.9 176.6 -79.7 -64.2 -34.5 -5.0 24.9 4 285 A S S S+ 0 0 52 1,-0.1 -1,-0.1 2,-0.1 39,-0.0 0.390 82.2 51.6 74.4 -9.4 -34.2 -8.3 23.0 5 286 A S + 0 0 89 2,-0.0 2,-1.1 0, 0.0 -1,-0.1 -0.036 68.7 159.6-145.4 32.4 -35.7 -6.3 20.0 6 287 A I + 0 0 25 33,-0.1 2,-0.3 26,-0.0 24,-0.1 -0.454 19.4 151.8 -65.6 100.1 -33.5 -3.2 19.8 7 288 A L - 0 0 86 -2,-1.1 2,-0.2 24,-0.0 24,-0.1 -0.940 43.7-116.0-129.1 151.6 -34.1 -2.0 16.2 8 289 A I - 0 0 25 -2,-0.3 2,-0.1 1,-0.1 6,-0.1 -0.532 46.8 -84.6 -85.4 154.3 -33.9 1.5 14.7 9 290 A N > - 0 0 82 1,-0.2 3,-4.3 -2,-0.2 -1,-0.1 -0.343 35.1-121.6 -60.0 128.3 -37.1 3.1 13.2 10 291 A E T 3 S+ 0 0 180 1,-0.3 -1,-0.2 -2,-0.1 4,-0.1 0.720 114.2 68.0 -43.6 -17.2 -37.7 1.9 9.6 11 292 A A T 3 S+ 0 0 71 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.446 99.4 58.1 -86.3 3.8 -37.4 5.7 8.9 12 293 A E S < S- 0 0 96 -3,-4.3 2,-0.1 -4,-0.1 -4,-0.1 -0.964 88.1-107.3-134.5 152.2 -33.7 5.7 9.8 13 294 A P - 0 0 77 0, 0.0 20,-0.4 0, 0.0 2,-0.3 -0.370 38.5-168.9 -72.1 150.5 -30.6 3.9 8.6 14 295 A T - 0 0 31 18,-0.1 2,-0.3 -6,-0.1 18,-0.2 -0.975 22.9-117.2-141.1 158.4 -29.1 1.1 10.8 15 296 A T E -A 31 0A 2 16,-3.0 16,-3.6 -2,-0.3 2,-0.5 -0.705 27.2-161.9 -92.3 143.8 -26.0 -1.1 11.0 16 297 A N E -Ab 30 83A 61 66,-4.3 68,-0.8 -2,-0.3 2,-0.6 -0.911 7.1-168.6-132.0 112.2 -26.5 -4.8 10.7 17 298 A I E -Ab 29 84A 2 12,-3.6 12,-2.3 -2,-0.5 2,-0.6 -0.848 10.1-160.8 -99.1 119.1 -23.9 -7.4 11.8 18 299 A Q E -Ab 28 85A 101 66,-1.5 68,-1.3 -2,-0.6 2,-0.3 -0.861 4.3-162.8-103.5 117.7 -24.6 -10.9 10.6 19 300 A I E -Ab 27 86A 3 8,-2.6 8,-2.3 -2,-0.6 2,-0.5 -0.753 1.0-162.0 -97.8 144.0 -22.9 -13.7 12.5 20 301 A R E - b 0 87A 162 66,-1.3 68,-1.1 -2,-0.3 6,-0.2 -0.944 12.7-139.6-126.8 115.7 -22.6 -17.2 11.0 21 302 A L E >> - b 0 88A 16 -2,-0.5 4,-1.2 66,-0.1 3,-0.6 -0.322 16.4-129.4 -66.0 157.2 -21.9 -20.3 13.2 22 303 A A T 34 S+ 0 0 73 66,-1.0 2,-0.5 1,-0.3 -1,-0.1 0.815 106.5 62.1 -78.0 -27.3 -19.5 -22.8 11.7 23 304 A D T 34 S- 0 0 121 65,-0.1 -1,-0.3 1,-0.1 -2,-0.1 -0.127 138.9 -75.2 -89.5 42.7 -21.9 -25.6 12.5 24 305 A G T <4 S+ 0 0 71 -3,-0.6 2,-0.3 -2,-0.5 -2,-0.2 0.972 84.0 156.9 68.7 53.5 -24.5 -24.1 10.2 25 306 A G < - 0 0 13 -4,-1.2 2,-0.3 63,-0.1 -1,-0.2 -0.779 21.5-171.4-109.9 157.5 -25.6 -21.3 12.5 26 307 A R + 0 0 184 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.924 12.4 160.0-149.9 123.8 -27.3 -18.0 11.5 27 308 A L E -A 19 0A 35 -8,-2.3 -8,-2.6 -2,-0.3 2,-0.5 -0.954 22.0-152.5-146.1 125.2 -28.0 -14.8 13.5 28 309 A V E -A 18 0A 66 -2,-0.4 2,-0.5 -10,-0.2 -10,-0.2 -0.815 10.8-168.1 -98.4 131.2 -28.7 -11.3 12.2 29 310 A Q E -A 17 0A 0 -12,-2.3 -12,-3.6 -2,-0.5 2,-0.6 -0.941 1.5-167.2-121.6 116.2 -27.8 -8.4 14.5 30 311 A K E +A 16 0A 92 -2,-0.5 -14,-0.3 -14,-0.3 2,-0.3 -0.875 12.8 176.4-104.1 122.2 -29.1 -4.9 13.6 31 312 A F E -A 15 0A 1 -16,-3.6 -16,-3.0 -2,-0.6 2,-0.2 -0.771 20.6-128.0-118.9 165.6 -27.5 -2.0 15.6 32 313 A N - 0 0 25 -2,-0.3 3,-0.4 -18,-0.2 -18,-0.1 -0.558 20.0-117.7-107.0 175.4 -27.9 1.8 15.3 33 314 A H S S+ 0 0 39 -20,-0.4 42,-4.7 1,-0.2 41,-1.1 0.852 115.9 35.0 -81.9 -34.2 -25.4 4.6 15.0 34 315 A S S S+ 0 0 81 39,-0.2 -1,-0.2 40,-0.2 0, 0.0 0.031 103.7 89.7-106.7 28.5 -26.3 6.3 18.3 35 316 A H S S- 0 0 15 -3,-0.4 2,-0.1 38,-0.1 -2,-0.1 0.571 73.5-126.4 -91.2-117.3 -27.0 3.0 20.1 36 317 A R > - 0 0 101 -4,-0.1 3,-2.4 38,-0.1 4,-0.4 -0.487 12.2-131.8 163.0 122.7 -24.2 1.1 22.0 37 318 A I G >> S+ 0 0 21 36,-0.3 3,-2.1 1,-0.3 4,-1.1 0.795 99.9 84.7 -61.0 -20.7 -22.8 -2.5 21.9 38 319 A S G 34 S+ 0 0 45 1,-0.3 4,-0.5 34,-0.2 3,-0.4 0.859 87.9 55.9 -49.7 -27.0 -23.1 -2.4 25.7 39 320 A D G X> S+ 0 0 33 -3,-2.4 4,-1.5 1,-0.2 3,-1.1 0.811 89.7 72.4 -75.1 -28.1 -26.7 -3.4 24.7 40 321 A I H <> S+ 0 0 26 -3,-2.1 4,-2.7 -4,-0.4 5,-0.3 0.891 85.2 68.0 -54.5 -35.7 -25.4 -6.4 22.8 41 322 A R H 3X S+ 0 0 198 -4,-1.1 4,-1.8 -3,-0.4 -1,-0.3 0.918 103.1 43.6 -51.8 -42.3 -24.6 -7.9 26.2 42 323 A L H <> S+ 0 0 28 -3,-1.1 4,-1.0 -4,-0.5 -1,-0.3 0.832 109.5 58.6 -74.2 -28.4 -28.3 -8.1 26.8 43 324 A F H X S+ 0 0 34 -4,-1.5 4,-1.5 2,-0.2 3,-0.3 0.970 108.1 44.0 -65.1 -51.0 -28.9 -9.4 23.2 44 325 A I H >X S+ 0 0 32 -4,-2.7 4,-0.9 1,-0.3 3,-0.9 0.978 115.8 46.6 -58.3 -54.3 -26.6 -12.4 23.7 45 326 A V H 3< S+ 0 0 117 -4,-1.8 -1,-0.3 -5,-0.3 -2,-0.2 0.751 107.2 62.9 -61.2 -18.7 -28.1 -13.2 27.2 46 327 A D H 3< S- 0 0 73 -4,-1.0 -1,-0.2 -3,-0.3 -2,-0.2 0.869 129.3 -0.4 -75.9 -34.8 -31.5 -12.7 25.5 47 328 A A H << S+ 0 0 60 -4,-1.5 3,-0.2 -3,-0.9 -2,-0.2 -0.075 94.4 110.2-148.3 44.7 -31.1 -15.6 23.1 48 329 A R X + 0 0 30 -4,-0.9 4,-2.1 1,-0.2 5,-0.3 -0.219 33.0 125.2-115.0 46.5 -27.7 -17.3 23.6 49 330 A P T 4 S+ 0 0 108 0, 0.0 -1,-0.2 0, 0.0 -4,-0.0 0.876 76.7 46.1 -70.5 -38.9 -28.9 -20.6 25.1 50 331 A A T 4 S+ 0 0 84 -3,-0.2 -2,-0.1 1,-0.2 -3,-0.0 0.945 114.9 45.9 -71.3 -45.5 -27.1 -22.8 22.5 51 332 A M T 4 S- 0 0 36 -4,-0.2 -1,-0.2 -7,-0.1 4,-0.1 0.949 76.3-178.1 -62.4 -46.8 -23.8 -20.9 22.7 52 333 A A S < S- 0 0 73 -4,-2.1 -1,-0.1 1,-0.1 -2,-0.0 0.932 84.7 -24.2 46.7 47.1 -23.9 -20.9 26.5 53 334 A A S S+ 0 0 100 -5,-0.3 2,-0.3 1,-0.1 -1,-0.1 0.959 93.6 173.8 83.0 69.1 -20.7 -18.9 26.4 54 335 A T - 0 0 41 -6,-0.1 2,-1.1 1,-0.0 -1,-0.1 -0.767 41.8-101.0-107.4 154.3 -19.1 -19.7 23.0 55 336 A S + 0 0 88 -2,-0.3 34,-1.7 34,-0.2 2,-0.3 -0.574 61.0 151.4 -75.2 101.0 -16.0 -18.1 21.4 56 337 A F E +C 88 0A 73 -2,-1.1 2,-0.3 32,-0.2 32,-0.2 -0.954 15.4 170.7-130.6 150.6 -17.5 -15.7 18.9 57 338 A V E -C 87 0A 74 30,-1.6 30,-3.3 -2,-0.3 2,-0.3 -0.992 15.1-152.4-157.3 148.8 -16.1 -12.4 17.5 58 339 A L E -C 86 0A 18 -2,-0.3 9,-0.7 28,-0.3 2,-0.3 -0.878 11.6-176.3-123.5 156.8 -16.9 -9.9 14.8 59 340 A M E -CD 85 66A 66 26,-2.5 26,-1.7 -2,-0.3 2,-0.6 -0.997 30.3-110.9-149.5 154.1 -14.8 -7.4 12.7 60 341 A T E > - D 0 65A 0 5,-2.2 5,-1.3 -2,-0.3 24,-0.1 -0.750 20.2-166.2 -89.3 123.1 -15.3 -4.7 10.1 61 342 A T T 5S+ 0 0 100 -2,-0.6 -1,-0.1 22,-0.3 23,-0.1 0.728 80.7 65.0 -81.0 -20.4 -13.9 -5.7 6.7 62 343 A F T 5S+ 0 0 156 21,-0.3 -1,-0.1 1,-0.2 22,-0.0 0.998 119.8 18.9 -64.7 -69.1 -14.0 -2.2 5.2 63 344 A P T 5S- 0 0 58 0, 0.0 -1,-0.2 0, 0.0 -2,-0.2 0.241 103.2-129.2 -83.9 15.0 -11.4 -0.6 7.5 64 345 A N T 5 + 0 0 125 1,-0.1 2,-0.3 -5,-0.1 -3,-0.2 0.899 62.9 136.8 37.5 53.8 -10.1 -4.1 8.3 65 346 A K E < -D 60 0A 123 -5,-1.3 -5,-2.2 14,-0.1 2,-0.4 -0.934 59.4-112.5-128.4 153.7 -10.4 -3.2 12.1 66 347 A E E -D 59 0A 84 -2,-0.3 -7,-0.2 -7,-0.2 -5,-0.0 -0.681 37.5-117.2 -85.7 132.3 -11.6 -5.1 15.1 67 348 A L + 0 0 21 -9,-0.7 -1,-0.1 -2,-0.4 11,-0.0 0.036 44.2 155.2 -56.0 175.2 -14.8 -3.6 16.7 68 349 A A + 0 0 71 0, 0.0 -1,-0.1 0, 0.0 9,-0.1 0.082 7.2 167.9-166.4 -66.9 -14.7 -2.3 20.3 69 350 A D - 0 0 17 8,-0.2 5,-0.1 6,-0.1 6,-0.0 0.177 21.2-149.4 54.5 172.7 -17.2 0.4 21.3 70 351 A E - 0 0 98 3,-0.3 4,-0.0 2,-0.0 -34,-0.0 0.344 47.8 -64.2-139.9 -78.8 -17.6 1.2 25.0 71 352 A N S S+ 0 0 103 -34,-0.1 -32,-0.1 -33,-0.1 -2,-0.0 0.396 101.3 82.2-155.9 -33.0 -21.0 2.4 26.4 72 353 A Q S S- 0 0 99 2,-0.1 -34,-0.2 -34,-0.0 -2,-0.0 0.498 101.7 -29.5 -58.7-142.6 -22.0 5.7 24.9 73 354 A T - 0 0 28 -37,-0.1 -3,-0.3 1,-0.1 -36,-0.3 0.319 64.9-117.8 -56.2-158.2 -23.7 5.6 21.5 74 355 A L S > S+ 0 0 11 -41,-1.1 3,-1.0 -38,-0.2 5,-0.3 0.694 105.6 50.8-117.1 -38.7 -22.8 2.8 19.0 75 356 A K G > >S+ 0 0 106 -42,-4.7 3,-3.3 1,-0.2 5,-0.6 0.792 88.0 83.3 -72.3 -25.8 -21.3 4.6 16.0 76 357 A E G 3 5S+ 0 0 99 -43,-0.5 -1,-0.2 1,-0.3 -42,-0.1 0.788 72.2 79.4 -50.5 -22.4 -18.9 6.6 18.3 77 358 A A G < 5S- 0 0 10 -3,-1.0 -1,-0.3 1,-0.2 -8,-0.2 0.680 102.6-131.6 -61.4 -11.3 -16.7 3.4 18.1 78 359 A N T < 5S+ 0 0 117 -3,-3.3 -1,-0.2 1,-0.1 -2,-0.1 0.478 90.7 94.0 74.1 -2.1 -15.7 4.8 14.7 79 360 A L T 5 + 0 0 5 -5,-0.3 2,-1.8 -4,-0.2 3,-0.1 0.421 41.7 135.0-100.1 1.6 -16.4 1.3 13.3 80 361 A L < + 0 0 62 -5,-0.6 -5,-0.1 1,-0.2 -47,-0.0 -0.215 15.1 150.4 -51.8 83.9 -19.9 2.2 12.3 81 362 A N - 0 0 38 -2,-1.8 2,-1.0 1,-0.1 -1,-0.2 0.455 55.2-128.6 -98.8 -1.2 -19.6 0.6 8.8 82 363 A A S S+ 0 0 41 -3,-0.1 -66,-4.3 -50,-0.1 2,-0.5 -0.076 93.8 55.6 80.8 -40.1 -23.4 -0.3 8.6 83 364 A V E +b 16 0A 67 -2,-1.0 -22,-0.3 -68,-0.2 2,-0.3 -0.915 68.4 176.1-128.9 109.7 -22.4 -3.9 7.8 84 365 A I E -b 17 0A 9 -68,-0.8 -66,-1.5 -2,-0.5 2,-0.6 -0.737 24.2-131.6-108.9 160.0 -20.2 -5.9 10.1 85 366 A V E -bC 18 59A 62 -26,-1.7 -26,-2.5 -2,-0.3 2,-0.4 -0.913 18.8-169.2-116.7 115.5 -19.1 -9.5 9.9 86 367 A Q E -bC 19 58A 10 -68,-1.3 -66,-1.3 -2,-0.6 2,-0.5 -0.792 5.0-159.5 -98.7 141.0 -19.4 -11.8 13.0 87 368 A R E -bC 20 57A 154 -30,-3.3 -30,-1.6 -2,-0.4 2,-0.5 -0.936 2.5-161.2-124.6 113.9 -17.8 -15.2 13.0 88 369 A L E bC 21 56A 1 -68,-1.1 -66,-1.0 -2,-0.5 -32,-0.2 -0.797 360.0 360.0 -95.4 126.8 -19.0 -17.8 15.5 89 370 A T 0 0 101 -34,-1.7 -34,-0.2 -2,-0.5 -68,-0.0 -0.755 360.0 360.0-131.8 360.0 -16.7 -20.8 16.2