==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPID TRANSPORT 27-FEB-01 1I5J . COMPND 2 MOLECULE: APOLIPOPROTEIN CII; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.A.MACRAILD,D.M.HATTERS,G.J.HOWLETT,P.R.GOOLEY . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6469.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 65.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 43.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 13 A T 0 0 146 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-173.5 96.5 -10.4 15.4 2 14 A F > + 0 0 171 0, 0.0 4,-1.6 0, 0.0 0, 0.0 0.136 360.0 49.1-164.3 -61.0 94.9 -7.3 16.9 3 15 A L H >> S+ 0 0 150 1,-0.2 4,-1.2 2,-0.2 3,-0.5 0.967 115.1 45.1 -60.1 -56.3 97.3 -4.5 17.8 4 16 A T H 3> S+ 0 0 58 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.795 106.8 64.1 -58.9 -28.7 99.0 -4.4 14.4 5 17 A Q H 3> S+ 0 0 105 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.930 97.8 52.6 -61.6 -47.1 95.6 -4.7 12.8 6 18 A V H X S+ 0 0 60 -4,-3.1 4,-2.0 -5,-0.2 3,-0.7 0.861 105.2 58.6 -73.9 -36.6 97.1 3.7 8.0 12 24 A S H 3X S+ 0 0 57 -4,-1.4 4,-1.3 -5,-0.4 -2,-0.2 0.869 95.9 64.0 -60.3 -37.0 95.0 2.0 5.3 13 25 A Y H 3< S+ 0 0 201 -4,-1.6 4,-0.3 1,-0.3 -1,-0.2 0.873 117.2 28.2 -54.0 -38.8 92.5 4.9 5.5 14 26 A W H S+ 0 0 45 -4,-0.3 4,-1.1 1,-0.2 -1,-0.2 0.883 111.6 46.0 -62.4 -36.9 95.7 8.7 -0.6 18 30 A K H X S+ 0 0 133 -4,-2.0 4,-0.9 2,-0.2 -1,-0.2 0.767 112.8 52.9 -75.4 -26.1 99.4 7.7 -0.6 19 31 A T H >X S+ 0 0 82 -4,-1.8 4,-3.0 -5,-0.2 3,-0.7 0.979 111.6 40.5 -72.5 -59.6 98.7 5.2 -3.4 20 32 A A H 3X S+ 0 0 64 -4,-3.0 4,-1.4 1,-0.3 -2,-0.2 0.794 118.0 52.0 -59.8 -27.1 96.9 7.6 -5.8 21 33 A A H 3< S+ 0 0 46 -4,-1.1 4,-0.5 -5,-0.4 -1,-0.3 0.751 111.8 45.9 -80.1 -25.6 99.5 10.1 -4.8 22 34 A Q H S+ 0 0 75 -4,-0.9 4,-2.2 -3,-0.7 5,-1.8 0.920 109.7 52.2 -81.2 -48.8 102.3 7.7 -5.6 23 35 A N H <>S+ 0 0 57 -4,-3.0 6,-1.8 1,-0.3 5,-1.3 0.947 113.1 43.6 -51.7 -56.7 101.0 6.5 -8.9 24 36 A L T <5S+ 0 0 116 -4,-1.4 -1,-0.3 -5,-0.2 -2,-0.2 0.800 115.3 55.5 -60.5 -28.3 100.6 10.0 -10.3 25 37 A Y T 45S- 0 0 187 -4,-0.5 -2,-0.2 -5,-0.1 -3,-0.2 0.996 136.5 -60.1 -66.6 -78.0 104.0 10.7 -8.8 26 38 A E T <5S+ 0 0 109 -4,-2.2 -3,-0.2 3,-0.1 -2,-0.1 0.110 107.0 101.6-163.7 26.9 106.3 8.0 -10.3 27 39 A K T - 0 0 39 -7,-0.2 2,-1.4 1,-0.2 3,-0.9 0.942 68.3 -60.0 66.2 98.7 105.7 -1.4 -12.8 35 47 A E T 3 S+ 0 0 119 1,-0.3 4,-0.4 3,-0.2 5,-0.4 -0.039 135.6 66.3 37.6 -74.4 105.5 -4.8 -11.0 36 48 A K T 3 S+ 0 0 190 -2,-1.4 -1,-0.3 1,-0.3 4,-0.3 0.808 123.5 21.0 -39.5 -33.9 106.1 -6.9 -14.2 37 49 A L S < S+ 0 0 95 -3,-0.9 4,-0.5 -4,-0.3 -1,-0.3 0.636 123.0 59.3-107.4 -25.2 109.5 -5.2 -14.0 38 50 A R S S+ 0 0 83 1,-0.2 -3,-0.2 2,-0.1 -2,-0.2 -0.110 101.9 56.9 -96.8 35.7 109.4 -4.3 -10.3 39 51 A D S S+ 0 0 66 -4,-0.4 4,-0.4 -3,-0.2 5,-0.2 0.585 88.2 65.2-130.1 -39.0 109.0 -7.9 -9.2 40 52 A L S > S+ 0 0 116 -5,-0.4 4,-0.6 -4,-0.3 3,-0.2 0.876 116.9 32.6 -56.2 -38.1 112.0 -9.8 -10.6 41 53 A Y T >4 S+ 0 0 138 -4,-0.5 6,-0.8 2,-0.2 3,-0.6 0.934 120.5 47.0 -83.0 -55.1 114.2 -7.8 -8.4 42 54 A S T 34 S+ 0 0 9 5,-0.3 -2,-0.2 1,-0.2 7,-0.2 0.197 117.3 46.6 -76.6 19.6 112.0 -7.2 -5.4 43 55 A K T 34 S+ 0 0 144 -4,-0.4 -1,-0.2 -3,-0.2 -2,-0.2 0.511 79.2 90.8-131.8 -18.9 111.1 -10.9 -5.3 44 56 A S S << S- 0 0 98 -3,-0.6 -2,-0.1 -4,-0.6 -3,-0.1 0.845 133.4 -36.0 -45.9 -34.2 114.4 -12.6 -5.7 45 57 A T S S- 0 0 114 -4,-0.5 -1,-0.2 0, 0.0 -2,-0.1 0.119 106.7 -61.9 178.5 32.6 114.3 -12.5 -1.9 46 58 A A S >S+ 0 0 29 -7,-0.2 5,-0.6 -5,-0.1 4,-0.4 0.906 74.7 164.3 75.5 42.9 112.6 -9.2 -1.1 47 59 A A T 5S+ 0 0 25 -6,-0.8 -5,-0.3 1,-0.2 -4,-0.1 0.825 85.6 1.0 -61.3 -33.1 115.4 -7.2 -2.8 48 60 A M T 5S+ 0 0 93 3,-0.1 4,-0.4 -9,-0.1 -1,-0.2 0.327 123.3 74.4-135.7 -0.0 113.1 -4.1 -2.8 49 61 A S T 5S+ 0 0 73 -7,-0.2 -2,-0.1 -8,-0.1 4,-0.1 0.956 117.7 12.7 -80.0 -56.6 110.0 -5.4 -1.1 50 62 A T T >>5S+ 0 0 95 -4,-0.4 3,-0.9 1,-0.1 4,-0.6 0.590 120.0 71.1 -95.0 -14.6 111.2 -5.5 2.5 51 63 A Y H >> S+ 0 0 97 -4,-0.4 4,-0.5 1,-0.3 -1,-0.2 0.777 103.2 41.8 -53.5 -24.9 112.2 -0.4 1.3 53 65 A G H <> S+ 0 0 39 -3,-0.9 4,-0.6 2,-0.1 -1,-0.3 0.663 115.7 47.9 -95.2 -20.4 112.0 -0.5 5.1 54 66 A I H X S+ 0 0 76 -4,-0.5 3,-2.5 1,-0.2 4,-1.9 0.825 109.8 67.4 -71.3 -32.7 116.2 4.2 5.6 57 69 A D H 3X S+ 0 0 53 -4,-0.6 4,-0.7 1,-0.3 -1,-0.2 0.817 102.8 47.0 -57.5 -30.7 117.0 2.0 8.7 58 70 A Q H 3< S+ 0 0 124 -4,-1.1 -1,-0.3 -3,-0.5 -2,-0.2 0.239 111.0 55.8 -94.9 12.1 120.6 2.0 7.4 59 71 A V H <> S+ 0 0 64 -3,-2.5 4,-2.1 3,-0.1 3,-0.5 0.812 112.8 31.2-106.2 -57.9 120.5 5.8 6.8 60 72 A L H X>S+ 0 0 64 -4,-1.9 4,-2.5 1,-0.2 6,-1.6 0.880 122.8 51.2 -69.8 -37.1 119.5 7.4 10.1 61 73 A S H <5S+ 0 0 50 -4,-0.7 -1,-0.2 -5,-0.5 -3,-0.1 0.564 121.0 35.5 -75.2 -9.1 121.2 4.6 12.0 62 74 A V H 45S+ 0 0 97 -3,-0.5 -2,-0.2 3,-0.1 -1,-0.2 0.543 123.9 40.8-116.8 -18.2 124.3 5.2 9.9 63 75 A L H <5S+ 0 0 112 -4,-2.1 -3,-0.2 0, 0.0 -2,-0.2 0.795 139.3 12.0 -98.3 -38.0 124.1 8.9 9.6 64 76 A K T <5S- 0 0 165 -4,-2.5 -3,-0.2 -5,-0.3 -4,-0.1 0.411 97.8-124.0-115.5 -7.3 123.1 9.8 13.1 65 77 A G S