==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 25-AUG-06 2I5L . COMPND 2 MOLECULE: COLD SHOCK PROTEIN CSPB; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR K.E.A.MAX,U.HEINEMANN . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4804.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 59.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 37.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X R 0 0 136 0, 0.0 2,-0.2 0, 0.0 49,-0.2 0.000 360.0 360.0 360.0 135.3 16.5 6.5 20.4 2 2 X L E -A 49 0A 55 47,-2.8 47,-2.1 18,-0.0 2,-0.3 -0.660 360.0-145.2-104.3 160.0 13.5 5.7 18.2 3 3 X K E +A 48 0A 168 45,-0.2 2,-0.3 -2,-0.2 45,-0.2 -0.806 30.9 141.2-118.6 159.2 12.9 6.1 14.5 4 4 X G E -A 47 0A 12 43,-2.0 43,-2.2 -2,-0.3 2,-0.4 -0.965 43.2 -94.0-175.4-178.5 9.7 6.9 12.8 5 5 X K E -AB 46 19A 129 14,-2.7 14,-3.5 -2,-0.3 2,-0.6 -0.975 36.9-109.0-125.3 135.9 8.0 8.9 10.0 6 6 X V E - B 0 18A 2 39,-2.7 38,-2.5 -2,-0.4 12,-0.3 -0.451 29.8-169.3 -59.7 107.5 6.4 12.3 10.2 7 7 X K E - 0 0 83 10,-1.3 2,-0.3 -2,-0.6 -1,-0.2 0.979 65.7 -31.3 -62.9 -52.5 2.7 11.5 9.9 8 8 X W E - B 0 17A 97 9,-1.6 9,-2.0 -3,-0.1 2,-0.4 -0.976 57.0-158.1-165.7 152.5 1.7 15.1 9.4 9 9 X F E - B 0 16A 27 -2,-0.3 2,-0.9 7,-0.2 7,-0.3 -0.998 17.2-145.6-143.9 135.4 2.8 18.6 10.4 10 10 X N > - 0 0 44 5,-3.7 4,-2.8 -2,-0.4 5,-0.3 -0.892 19.1-170.1 -94.7 103.8 1.2 22.0 10.6 11 11 X S T 4 S+ 0 0 53 -2,-0.9 -1,-0.1 1,-0.2 5,-0.1 0.534 83.1 52.7 -74.2 -12.1 4.2 24.2 9.6 12 12 X E T 4 S+ 0 0 164 3,-0.1 -1,-0.2 -3,-0.0 -2,-0.0 0.878 119.1 32.2 -86.3 -44.3 2.3 27.3 10.6 13 13 X K T 4 S- 0 0 148 2,-0.2 -2,-0.2 17,-0.0 3,-0.1 0.864 102.2-122.6 -84.4 -42.9 1.4 26.2 14.0 14 14 X G S < S+ 0 0 6 -4,-2.8 16,-1.6 1,-0.4 2,-0.2 0.318 72.2 94.2 116.7 -7.4 4.3 24.0 15.0 15 15 X F E + C 0 29A 73 -5,-0.3 -5,-3.7 14,-0.2 -1,-0.4 -0.656 29.5 131.4-117.3 175.7 2.7 20.6 15.8 16 16 X G E -BC 9 28A 0 12,-0.9 12,-2.2 -7,-0.3 2,-0.3 -0.920 48.6 -86.9 167.9-170.4 1.9 17.4 14.0 17 17 X F E -BC 8 27A 63 -9,-2.0 -9,-1.6 -2,-0.3 -10,-1.3 -0.928 19.0-141.9-131.6 153.2 2.3 13.7 14.8 18 18 X I E -BC 6 26A 0 8,-3.1 8,-2.6 -2,-0.3 2,-0.4 -0.955 20.7-146.7-110.0 130.9 5.1 11.2 14.3 19 19 X E E -B 5 0A 76 -14,-3.5 -14,-2.7 -2,-0.4 2,-0.4 -0.832 15.7-176.5-103.5 141.3 4.0 7.7 13.3 20 20 X V - 0 0 23 3,-0.4 2,-0.7 -2,-0.4 -16,-0.1 -0.997 28.7-124.2-136.0 134.6 5.8 4.6 14.4 21 21 X E S S+ 0 0 193 -2,-0.4 3,-0.1 1,-0.2 -2,-0.0 -0.763 102.3 24.5 -76.6 115.9 5.1 1.0 13.4 22 22 X G S S+ 0 0 86 -2,-0.7 -1,-0.2 1,-0.4 2,-0.2 -0.471 119.9 53.6 124.9 -55.6 4.7 -0.8 16.7 23 23 X Q S S- 0 0 94 1,-0.2 -3,-0.4 -2,-0.0 -1,-0.4 -0.485 90.2 -92.6-101.6 173.4 3.6 2.1 19.0 24 24 X D - 0 0 143 -2,-0.2 -1,-0.2 1,-0.2 2,-0.1 -0.272 60.1 -70.4 -74.7 172.9 0.9 4.7 18.7 25 25 X D - 0 0 63 -6,-0.1 2,-0.4 -2,-0.1 -6,-0.2 -0.414 47.2-139.8 -69.0 140.8 1.4 8.1 17.1 26 26 X V E -C 18 0A 11 -8,-2.6 -8,-3.1 -2,-0.1 2,-0.3 -0.841 13.1-125.1-107.7 134.3 3.7 10.6 19.0 27 27 X F E -C 17 0A 65 -2,-0.4 33,-3.5 31,-0.3 2,-0.5 -0.592 27.0-164.5 -78.2 136.5 2.9 14.3 19.3 28 28 X V E -C 16 0A 0 -12,-2.2 -12,-0.9 -2,-0.3 2,-0.3 -0.986 7.5-165.8-130.0 127.2 5.7 16.6 18.1 29 29 X H E > -C 15 0A 54 -2,-0.5 3,-2.4 31,-0.4 4,-0.3 -0.777 34.3-115.4-101.6 150.0 6.0 20.2 18.7 30 30 X F G > S+ 0 0 82 -16,-1.6 3,-2.5 -2,-0.3 -15,-0.1 0.852 113.7 68.4 -50.4 -36.5 8.4 22.4 16.8 31 31 X S G 3 S+ 0 0 59 1,-0.3 -1,-0.3 -17,-0.1 31,-0.1 0.760 91.9 61.6 -57.9 -23.3 10.3 23.0 20.0 32 32 X A G < S+ 0 0 8 -3,-2.4 31,-2.5 29,-0.1 2,-0.5 0.601 81.3 107.3 -76.5 -10.9 11.3 19.3 19.9 33 33 X I B < -e 63 0B 6 -3,-2.5 2,-0.2 -4,-0.3 31,-0.2 -0.553 53.8-162.8 -83.1 117.9 13.1 19.8 16.6 34 34 X Q + 0 0 86 29,-3.3 31,-0.3 -2,-0.5 2,-0.3 -0.513 44.7 58.1 -85.6 164.2 16.9 19.8 16.8 35 35 X G S S- 0 0 61 -2,-0.2 2,-0.3 29,-0.1 4,-0.1 -0.699 83.7 -45.5 117.7-165.0 19.1 21.1 14.1 36 36 X E S S+ 0 0 196 -2,-0.3 2,-0.0 2,-0.1 -2,-0.0 -0.668 88.7 14.1-105.6 159.4 19.7 24.3 12.3 37 37 X G S S- 0 0 61 -2,-0.3 2,-0.5 2,-0.1 0, 0.0 -0.183 106.3 -9.6 80.6-172.1 17.3 26.7 10.8 38 38 X F S S- 0 0 178 1,-0.1 2,-0.5 -2,-0.0 -2,-0.1 -0.534 74.8-120.2 -68.3 116.0 13.6 27.2 11.2 39 39 X K + 0 0 87 -2,-0.5 2,-0.3 -6,-0.1 -1,-0.1 -0.393 59.2 121.7 -65.5 111.5 12.2 24.3 13.0 40 40 X T - 0 0 39 -2,-0.5 2,-0.3 -10,-0.1 -29,-0.1 -0.969 40.5-143.8-156.3 173.2 9.6 22.5 11.0 41 41 X L - 0 0 0 -2,-0.3 2,-0.3 -26,-0.1 -32,-0.1 -0.933 3.9-150.2-137.0 157.9 8.7 19.1 9.5 42 42 X E > - 0 0 131 -2,-0.3 3,-1.0 -34,-0.1 -36,-0.2 -0.942 37.5 -90.6-124.5 154.6 7.0 17.7 6.3 43 43 X E T 3 S+ 0 0 151 -2,-0.3 -36,-0.2 1,-0.2 -35,-0.1 -0.309 109.3 23.3 -70.1 143.8 5.0 14.4 6.0 44 44 X G T 3 S+ 0 0 54 -38,-2.5 -1,-0.2 1,-0.3 -37,-0.1 -0.130 86.7 135.7 92.8 -38.2 7.0 11.3 5.0 45 45 X Q < - 0 0 44 -3,-1.0 -39,-2.7 -40,-0.1 2,-0.4 -0.098 55.7-125.7 -38.5 133.5 10.2 12.7 6.4 46 46 X A E +A 5 0A 18 -41,-0.2 20,-2.5 -3,-0.1 2,-0.3 -0.753 34.6 178.7 -92.0 135.7 12.1 10.2 8.5 47 47 X V E -AD 4 65A 3 -43,-2.2 -43,-2.0 -2,-0.4 2,-0.4 -0.820 25.3-149.0-129.8 162.3 13.1 11.2 12.0 48 48 X S E +AD 3 64A 18 16,-1.7 16,-2.3 -2,-0.3 2,-0.3 -0.951 38.1 139.9-124.8 147.8 14.8 9.8 15.0 49 49 X F E -A 2 0A 0 -47,-2.1 -47,-2.8 -2,-0.4 2,-0.3 -0.911 41.7-117.8-166.5 179.6 13.6 11.1 18.4 50 50 X E E - D 0 61A 78 11,-2.5 11,-2.0 -2,-0.3 2,-0.6 -0.829 27.4-116.2-127.5 168.5 12.8 10.0 22.0 51 51 X I E - D 0 60A 59 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.959 26.6-169.1-110.0 121.1 9.5 10.1 23.9 52 52 X V E - D 0 59A 83 7,-2.6 7,-1.3 -2,-0.6 2,-0.4 -0.940 4.7-165.7-108.0 136.0 9.4 12.4 27.0 53 53 X E E + D 0 58A 139 -2,-0.5 2,-0.1 5,-0.2 -2,-0.0 -0.986 17.6 154.6-126.0 122.9 6.4 12.1 29.2 54 54 X G E > - D 0 57A 55 3,-1.2 3,-1.0 -2,-0.4 0, 0.0 -0.186 67.9 -57.0-115.1-143.0 5.4 14.6 31.9 55 55 X N T 3 S+ 0 0 176 1,-0.3 -2,-0.0 -2,-0.1 0, 0.0 0.356 134.7 55.6 -89.4 6.9 2.0 15.3 33.5 56 56 X R T 3 S- 0 0 238 1,-0.4 -1,-0.3 3,-0.0 -3,-0.0 0.302 115.3-109.8-116.8 7.2 0.6 16.1 30.1 57 57 X G E < -D 54 0A 27 -3,-1.0 -3,-1.2 2,-0.0 -1,-0.4 -0.310 55.5 -25.8 90.8 177.7 1.5 12.8 28.6 58 58 X P E +D 53 0A 73 0, 0.0 -31,-0.3 0, 0.0 2,-0.3 -0.350 56.5 161.7 -68.6 157.7 4.1 11.7 25.9 59 59 X Q E -D 52 0A 69 -7,-1.3 -7,-2.6 -33,-0.1 -31,-0.2 -0.942 43.5 -86.0-169.2 151.8 5.4 13.9 23.2 60 60 X A E -D 51 0A 4 -33,-3.5 -31,-0.4 -2,-0.3 2,-0.3 -0.425 41.6-172.1 -74.9 151.8 8.5 13.8 21.0 61 61 X A E +D 50 0A 21 -11,-2.0 -11,-2.5 1,-0.1 -29,-0.1 -0.985 59.7 14.0-140.0 145.3 11.8 15.1 22.2 62 62 X N E S- 0 0 61 -2,-0.3 2,-0.5 1,-0.2 -29,-0.2 0.854 73.4-170.2 64.6 42.8 15.1 15.7 20.5 63 63 X V E -e 33 0B 0 -31,-2.5 -29,-3.3 -14,-0.1 2,-0.4 -0.510 6.2-175.8 -72.8 112.7 13.8 15.3 16.9 64 64 X T E -D 48 0A 54 -16,-2.3 -16,-1.7 -2,-0.5 2,-0.4 -0.923 20.8-130.4-104.2 139.2 16.7 15.1 14.4 65 65 X I E +D 47 0A 63 -2,-0.4 -18,-0.2 -31,-0.3 2,-0.1 -0.722 51.5 82.9 -92.7 135.0 15.7 14.9 10.8 66 66 X E 0 0 140 -20,-2.5 -2,-0.1 -2,-0.4 -21,-0.0 -0.044 360.0 360.0 142.6 141.2 17.0 12.4 8.3 67 67 X A 0 0 114 -2,-0.1 -20,-0.1 -19,-0.0 -1,-0.0 0.108 360.0 360.0 163.0 360.0 16.8 9.0 6.7